RNA–Protein interactions for RNA: ENST00000252108.7

UBE4A-201, Transcript of ubiquitination factor E4A, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene UBE4A, Length 6,103 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4A-201ENST00000252108 CYP39A1Q9NYL5 469 aa4.36□□□□□ -1.71
UBE4A-201ENST00000252108 STK10O94804 968 aaKnown RBP4.36□□□□□ -1.71
UBE4A-201ENST00000252108 NPTXRO95502 500 aa4.36□□□□□ -1.71
UBE4A-201ENST00000252108 P4HBP07237 508 aaKnown RBP4.36□□□□□ -1.71
UBE4A-201ENST00000252108 HOXD8P13378 290 aaPredicted RBP4.36□□□□□ -1.71
UBE4A-201ENST00000252108 ALADP13716 330 aa4.36□□□□□ -1.71
UBE4A-201ENST00000252108 ATP6V1C1P21283 382 aa4.36□□□□□ -1.71
UBE4A-201ENST00000252108 RPL34P49207 117 aaKnown RBP4.36□□□□□ -1.71
UBE4A-201ENST00000252108 FSTL1Q12841 308 aa4.36□□□□□ -1.71
UBE4A-201ENST00000252108 MORF4L2Q15014 288 aa4.36□□□□□ -1.71
UBE4A-201ENST00000252108 RASA2Q15283 850 aa4.36□□□□□ -1.71
UBE4A-201ENST00000252108 DBN1Q16643 649 aa4.36□□□□□ -1.71
UBE4A-201ENST00000252108 ZACNQ401N2 412 aa4.36□□□□□ -1.71
UBE4A-201ENST00000252108 CFAP157Q5JU67 520 aa4.36□□□□□ -1.71
UBE4A-201ENST00000252108 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP4.36□□□□□ -1.71
UBE4A-201ENST00000252108 KIRREL3Q8IZU9 778 aa4.36□□□□□ -1.71
UBE4A-201ENST00000252108 GABPB2Q8TAK5 448 aaPredicted RBP4.36□□□□□ -1.71
UBE4A-201ENST00000252108 TRAF3IP1Q8TDR0 691 aaPredicted RBP4.36□□□□□ -1.71
UBE4A-201ENST00000252108 JADE3Q92613 823 aa4.36□□□□□ -1.71
UBE4A-201ENST00000252108 NSL1Q96IY1 281 aa4.36□□□□□ -1.71
UBE4A-201ENST00000252108 NR1H4Q96RI1 486 aaPredicted RBP4.36□□□□□ -1.71
UBE4A-201ENST00000252108 OSBPL8Q9BZF1 889 aa4.36□□□□□ -1.71
UBE4A-201ENST00000252108 PTPN22Q9Y2R2 807 aa4.36□□□□□ -1.71
UBE4A-201ENST00000252108 CHD5Q8TDI0 1954 aa4.36□□□□□ -1.71
UBE4A-201ENST00000252108 FDX1P10109 184 aa4.36□□□□□ -1.71
UBE4A-201ENST00000252108 CHRM1P11229 460 aaPredicted RBP4.36□□□□□ -1.71
UBE4A-201ENST00000252108 COMTP21964 271 aa4.36□□□□□ -1.71
UBE4A-201ENST00000252108 SFNP31947 248 aa4.36□□□□□ -1.71
UBE4A-201ENST00000252108 PAPOLAP51003 745 aaKnown RBP4.36□□□□□ -1.71
UBE4A-201ENST00000252108 RPL26P61254 145 aaKnown RBP4.36□□□□□ -1.71
UBE4A-201ENST00000252108 ASPHQ12797 758 aa4.36□□□□□ -1.71
UBE4A-201ENST00000252108 AUHQ13825 339 aaKnown RBP4.36□□□□□ -1.71
UBE4A-201ENST00000252108 KYNUQ16719 465 aa4.36□□□□□ -1.71
UBE4A-201ENST00000252108 PLEKHA7Q6IQ23 1121 aa4.36□□□□□ -1.71
UBE4A-201ENST00000252108 ACAD10Q6JQN1 1059 aa4.36□□□□□ -1.71
UBE4A-201ENST00000252108 ZNF746Q6NUN9 644 aaPredicted RBP4.36□□□□□ -1.71
UBE4A-201ENST00000252108 NLRX1Q86UT6 975 aa4.36□□□□□ -1.71
UBE4A-201ENST00000252108 TDRPQ86YL5 185 aa4.36□□□□□ -1.71
UBE4A-201ENST00000252108 MAP7D3Q8IWC1 876 aa4.36□□□□□ -1.71
UBE4A-201ENST00000252108 WDTC1Q8N5D0 677 aa4.36□□□□□ -1.71
UBE4A-201ENST00000252108 PYROXD1Q8WU10 500 aa4.36□□□□□ -1.71
UBE4A-201ENST00000252108 GPRASP2Q96D09 838 aa4.36□□□□□ -1.71
UBE4A-201ENST00000252108 CDC42EP4Q9H3Q1 356 aaKnown RBP4.36□□□□□ -1.71
UBE4A-201ENST00000252108 TBC1D22BQ9NU19 505 aa4.36□□□□□ -1.71
UBE4A-201ENST00000252108 BTBD7Q9P203 1132 aa4.36□□□□□ -1.71
UBE4A-201ENST00000252108 ANAPC7Q9UJX3 599 aa4.36□□□□□ -1.71
UBE4A-201ENST00000252108 SHOC2Q9UQ13 582 aa4.36□□□□□ -1.71
UBE4A-201ENST00000252108 AFG3L2Q9Y4W6 797 aa4.36□□□□□ -1.71
UBE4A-201ENST00000252108 CLIC2O15247 247 aa4.36□□□□□ -1.71
UBE4A-201ENST00000252108 KRT7P08729 469 aa4.36□□□□□ -1.71
UBE4A-201ENST00000252108 GARSP41250 739 aaKnown RBP4.36□□□□□ -1.71
UBE4A-201ENST00000252108 HSPA13P48723 471 aa4.36□□□□□ -1.71
UBE4A-201ENST00000252108 CSRP3P50461 194 aa4.36□□□□□ -1.71
UBE4A-201ENST00000252108 ALDH5A1P51649 535 aaPredicted RBP4.36□□□□□ -1.71
UBE4A-201ENST00000252108 NCALDP61601 193 aa4.36□□□□□ -1.71
UBE4A-201ENST00000252108 TCP10Q12799 353 aa4.36□□□□□ -1.71
UBE4A-201ENST00000252108 SGSM1Q2NKQ1 1148 aa4.36□□□□□ -1.71
UBE4A-201ENST00000252108 TRMT5Q32P41 509 aaKnown RBP4.36□□□□□ -1.71
UBE4A-201ENST00000252108 ZC3H12AQ5D1E8 599 aaKnown RBP4.36□□□□□ -1.71
UBE4A-201ENST00000252108 ANKRD20A2Q5SQ80 823 aa4.36□□□□□ -1.71
UBE4A-201ENST00000252108 ANKRD20A1Q5TYW2 823 aa4.36□□□□□ -1.71
UBE4A-201ENST00000252108 AADACL2Q6P093 401 aa4.36□□□□□ -1.71
UBE4A-201ENST00000252108 LONP2Q86WA8 852 aa4.36□□□□□ -1.71
UBE4A-201ENST00000252108 IFNLR1Q8IU57 520 aaPredicted RBP4.36□□□□□ -1.71
UBE4A-201ENST00000252108 CRLF3Q8IUI8 442 aa4.36□□□□□ -1.71
UBE4A-201ENST00000252108 SCYL3Q8IZE3 742 aa4.36□□□□□ -1.71
UBE4A-201ENST00000252108 SUPT20HQ8NEM7 779 aa4.36□□□□□ -1.71
UBE4A-201ENST00000252108 CDKL2Q92772 493 aa4.36□□□□□ -1.71
UBE4A-201ENST00000252108 SAYSD1Q9NPB0 183 aa4.36□□□□□ -1.71
UBE4A-201ENST00000252108 TXNDC16Q9P2K2 825 aa4.36□□□□□ -1.71
UBE4A-201ENST00000252108 ZNRF3Q9ULT6 936 aa4.36□□□□□ -1.71
UBE4A-201ENST00000252108 CITO14578 2027 aa4.36□□□□□ -1.71
UBE4A-201ENST00000252108 CFAP69A5D8W1 941 aa4.35□□□□□ -1.71
UBE4A-201ENST00000252108 TMEM150BA6NC51 233 aa4.35□□□□□ -1.71
UBE4A-201ENST00000252108 TTLL13PA6NNM8 815 aa4.35□□□□□ -1.71
UBE4A-201ENST00000252108 MED7O43513 233 aa4.35□□□□□ -1.71
UBE4A-201ENST00000252108 NOL3O60936 208 aaKnown RBP4.35□□□□□ -1.71
UBE4A-201ENST00000252108 LGR5O75473 907 aa4.35□□□□□ -1.71
UBE4A-201ENST00000252108 KRT38O76015 456 aa4.35□□□□□ -1.71
UBE4A-201ENST00000252108 CFHP08603 1231 aa4.35□□□□□ -1.71
UBE4A-201ENST00000252108 MAGEA4P43358 317 aa4.35□□□□□ -1.71
UBE4A-201ENST00000252108 SERPINB9P50453 376 aa4.35□□□□□ -1.71
UBE4A-201ENST00000252108 CCNG1P51959 295 aa4.35□□□□□ -1.71
UBE4A-201ENST00000252108 YARSP54577 528 aaKnown RBP4.35□□□□□ -1.71
UBE4A-201ENST00000252108 CYP24A1Q07973 514 aa4.35□□□□□ -1.71
UBE4A-201ENST00000252108 TFDP2Q14188 446 aa4.35□□□□□ -1.71
UBE4A-201ENST00000252108 FSCBQ5H9T9 825 aa4.35□□□□□ -1.71
UBE4A-201ENST00000252108 BZW1Q7L1Q6 419 aaKnown RBP4.35□□□□□ -1.71
UBE4A-201ENST00000252108 WDR75Q8IWA0 830 aaKnown RBP4.35□□□□□ -1.71
UBE4A-201ENST00000252108 TTC39CQ8N584 583 aa4.35□□□□□ -1.71
UBE4A-201ENST00000252108 GDAP1Q8TB36 358 aa4.35□□□□□ -1.71
UBE4A-201ENST00000252108 DENND1AQ8TEH3 1009 aa4.35□□□□□ -1.71
UBE4A-201ENST00000252108 ZFAND2BQ8WV99 257 aa4.35□□□□□ -1.71
UBE4A-201ENST00000252108 TEKT4Q8WW24 435 aa4.35□□□□□ -1.71
UBE4A-201ENST00000252108 ERP27Q96DN0 273 aa4.35□□□□□ -1.71
UBE4A-201ENST00000252108 CDHR1Q96JP9 859 aa4.35□□□□□ -1.71
UBE4A-201ENST00000252108 ZNF577Q9BSK1 485 aa4.35□□□□□ -1.71
UBE4A-201ENST00000252108 C11orf84Q9BUA3 381 aaPredicted RBP4.35□□□□□ -1.71
UBE4A-201ENST00000252108 CELF4Q9BZC1 486 aaKnown RBP4.35□□□□□ -1.71
UBE4A-201ENST00000252108 YIPF3Q9GZM5 350 aa4.35□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms