RNA–Protein interactions for RNA: ENST00000249014.4

CDC42EP1-201, Transcript of CDC42 effector protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CDC42EP1, Length 2,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP1-201ENST00000249014 TMEM121Q9BTD3 319 aa20.6■□□□□ 0.89
CDC42EP1-201ENST00000249014 RPF1Q9H9Y2 349 aaKnown RBP20.6■□□□□ 0.89
CDC42EP1-201ENST00000249014 IFT122Q9HBG6 1241 aa20.6■□□□□ 0.89
CDC42EP1-201ENST00000249014 DDX56Q9NY93 547 aaKnown RBP20.6■□□□□ 0.89
CDC42EP1-201ENST00000249014 EURLQ9NYK6 297 aa20.6■□□□□ 0.89
CDC42EP1-201ENST00000249014 SPDYE5A6NIY4 337 aa20.59■□□□□ 0.89
CDC42EP1-201ENST00000249014 PSMA2P25787 234 aa20.59■□□□□ 0.89
CDC42EP1-201ENST00000249014 IL1R2P27930 398 aa20.59■□□□□ 0.89
CDC42EP1-201ENST00000249014 SLC26A2P50443 739 aa20.59■□□□□ 0.89
CDC42EP1-201ENST00000249014 VCPP55072 806 aaKnown RBP20.59■□□□□ 0.89
CDC42EP1-201ENST00000249014 YWHAEP62258 255 aaKnown RBP20.59■□□□□ 0.89
CDC42EP1-201ENST00000249014 SLC25A11Q02978 314 aaKnown RBP20.59■□□□□ 0.89
CDC42EP1-201ENST00000249014 GPS1Q13098 491 aa20.59■□□□□ 0.89
CDC42EP1-201ENST00000249014 SMTNL2Q2TAL5 461 aa20.59■□□□□ 0.89
CDC42EP1-201ENST00000249014 WDR78Q5VTH9 848 aa20.59■□□□□ 0.89
CDC42EP1-201ENST00000249014 TWNKQ96RR1 684 aa20.59■□□□□ 0.89
CDC42EP1-201ENST00000249014 CPXM1Q96SM3 734 aa20.59■□□□□ 0.89
CDC42EP1-201ENST00000249014 LHX5Q9H2C1 402 aa20.59■□□□□ 0.89
CDC42EP1-201ENST00000249014 SAYSD1Q9NPB0 183 aa20.59■□□□□ 0.89
CDC42EP1-201ENST00000249014 HMGXB4Q9UGU5 601 aa20.59■□□□□ 0.89
CDC42EP1-201ENST00000249014 STRIP2Q9ULQ0 834 aa20.59■□□□□ 0.89
CDC42EP1-201ENST00000249014 DRG1Q9Y295 367 aaKnown RBP20.59■□□□□ 0.89
CDC42EP1-201ENST00000249014 SIGLEC16A6NMB1 481 aa20.59■□□□□ 0.89
CDC42EP1-201ENST00000249014 CDH16O75309 829 aa20.59■□□□□ 0.89
CDC42EP1-201ENST00000249014 LRCH4O75427 683 aa20.59■□□□□ 0.89
CDC42EP1-201ENST00000249014 C22orf31O95567 290 aa20.59■□□□□ 0.89
CDC42EP1-201ENST00000249014 GH1P01241 217 aa20.59■□□□□ 0.89
CDC42EP1-201ENST00000249014 KRT3P12035 628 aa20.59■□□□□ 0.89
CDC42EP1-201ENST00000249014 BRAFP15056 766 aa20.59■□□□□ 0.89
CDC42EP1-201ENST00000249014 PECAM1P16284 738 aaPredicted RBP20.59■□□□□ 0.89
CDC42EP1-201ENST00000249014 HNRNPH1P31943 449 aaKnown RBP20.59■□□□□ 0.89
CDC42EP1-201ENST00000249014 IGBP1P78318 339 aa20.59■□□□□ 0.89
CDC42EP1-201ENST00000249014 FASTKD3Q14CZ7 662 aaKnown RBP20.59■□□□□ 0.89
CDC42EP1-201ENST00000249014 LACTB2Q53H82 288 aaPredicted RBP20.59■□□□□ 0.89
CDC42EP1-201ENST00000249014 ZNF667Q5HYK9 610 aa20.59■□□□□ 0.89
CDC42EP1-201ENST00000249014 ANKRD42Q8N9B4 389 aa20.59■□□□□ 0.89
CDC42EP1-201ENST00000249014 CCHCR1Q8TD31 782 aa20.59■□□□□ 0.89
CDC42EP1-201ENST00000249014 NKD2Q969F2 451 aaPredicted RBP20.59■□□□□ 0.89
CDC42EP1-201ENST00000249014 SMYD3Q9H7B4 428 aa20.59■□□□□ 0.89
CDC42EP1-201ENST00000249014 ACTR5Q9H9F9 607 aaPredicted RBP20.59■□□□□ 0.89
CDC42EP1-201ENST00000249014 KCNK9Q9NPC2 374 aa20.59■□□□□ 0.89
CDC42EP1-201ENST00000249014 SAE1Q9UBE0 346 aaPredicted RBP20.59■□□□□ 0.89
CDC42EP1-201ENST00000249014 LACTBL1A8MY62 500 aa20.58■□□□□ 0.89
CDC42EP1-201ENST00000249014 ATP2C2O75185 946 aa20.58■□□□□ 0.89
CDC42EP1-201ENST00000249014 STAT4Q14765 748 aa20.58■□□□□ 0.89
CDC42EP1-201ENST00000249014 KCNT1Q5JUK3 1230 aa20.58■□□□□ 0.89
CDC42EP1-201ENST00000249014 ANKRD13AQ8IZ07 590 aa20.58■□□□□ 0.89
CDC42EP1-201ENST00000249014 DYDC1Q8WWB3 177 aa20.58■□□□□ 0.89
CDC42EP1-201ENST00000249014 PPP1R16BQ96T49 567 aa20.58■□□□□ 0.89
CDC42EP1-201ENST00000249014 FOXP3Q9BZS1 431 aa20.58■□□□□ 0.89
CDC42EP1-201ENST00000249014 KDM4CQ9H3R0 1056 aa20.58■□□□□ 0.89
CDC42EP1-201ENST00000249014 ZWILCHQ9H900 591 aa20.58■□□□□ 0.89
CDC42EP1-201ENST00000249014 TPX2Q9ULW0 747 aaKnown RBP20.58■□□□□ 0.89
CDC42EP1-201ENST00000249014 KCNH4Q9UQ05 1017 aa20.58■□□□□ 0.89
CDC42EP1-201ENST00000249014 CCT8L1PA6NM43 557 aa20.58■□□□□ 0.88
CDC42EP1-201ENST00000249014 IL18RAPO95256 599 aa20.58■□□□□ 0.88
CDC42EP1-201ENST00000249014 ITGB3P05106 788 aa20.58■□□□□ 0.88
CDC42EP1-201ENST00000249014 ITGAVP06756 1048 aa20.58■□□□□ 0.88
CDC42EP1-201ENST00000249014 PSMC1P62191 440 aaKnown RBP20.58■□□□□ 0.88
CDC42EP1-201ENST00000249014 PDE4CQ08493 712 aa20.58■□□□□ 0.88
CDC42EP1-201ENST00000249014 HP1BP3Q5SSJ5 553 aaPredicted RBP20.58■□□□□ 0.88
CDC42EP1-201ENST00000249014 GJC2Q5T442 439 aaPredicted RBP20.58■□□□□ 0.88
CDC42EP1-201ENST00000249014 JADE1Q6IE81 842 aa20.58■□□□□ 0.88
CDC42EP1-201ENST00000249014 POLNQ7Z5Q5 900 aa20.58■□□□□ 0.88
CDC42EP1-201ENST00000249014 EMC1Q8N766 993 aa20.58■□□□□ 0.88
CDC42EP1-201ENST00000249014 ANKS4BQ8N8V4 417 aa20.58■□□□□ 0.88
CDC42EP1-201ENST00000249014 SLC4A11Q8NBS3 891 aa20.58■□□□□ 0.88
CDC42EP1-201ENST00000249014 CXorf38Q8TB03 319 aa20.58■□□□□ 0.88
CDC42EP1-201ENST00000249014 SAMD15Q9P1V8 674 aa20.58■□□□□ 0.88
CDC42EP1-201ENST00000249014 ZSWIM8A7E2V4 1837 aa20.58■□□□□ 0.88
CDC42EP1-201ENST00000249014 ERBB2P04626 1255 aa20.57■□□□□ 0.88
CDC42EP1-201ENST00000249014 ABHD2P08910 425 aa20.57■□□□□ 0.88
CDC42EP1-201ENST00000249014 STAG3L1P0CL83 205 aa20.57■□□□□ 0.88
CDC42EP1-201ENST00000249014 GCAP28676 217 aa20.57■□□□□ 0.88
CDC42EP1-201ENST00000249014 POLR2BP30876 1174 aaKnown RBP20.57■□□□□ 0.88
CDC42EP1-201ENST00000249014 SCTRP47872 440 aa20.57■□□□□ 0.88
CDC42EP1-201ENST00000249014 DYNLT1P63172 113 aa20.57■□□□□ 0.88
CDC42EP1-201ENST00000249014 ITIH4Q14624 930 aa20.57■□□□□ 0.88
CDC42EP1-201ENST00000249014 RNASEH2BQ5TBB1 312 aaKnown RBP20.57■□□□□ 0.88
CDC42EP1-201ENST00000249014 SRRM1Q8IYB3 904 aaKnown RBP20.57■□□□□ 0.88
CDC42EP1-201ENST00000249014 SLC35B2Q8TB61 432 aa20.57■□□□□ 0.88
CDC42EP1-201ENST00000249014 DYNC1LI1Q9Y6G9 523 aaKnown RBP20.57■□□□□ 0.88
CDC42EP1-201ENST00000249014 TCP11X1B4DZS4 312 aa20.56■□□□□ 0.88
CDC42EP1-201ENST00000249014 SGK1O00141 431 aa20.56■□□□□ 0.88
CDC42EP1-201ENST00000249014 MED7O43513 233 aa20.56■□□□□ 0.88
CDC42EP1-201ENST00000249014 PLCB3Q01970 1234 aa20.56■□□□□ 0.88
CDC42EP1-201ENST00000249014 ADCY1Q08828 1119 aa20.56■□□□□ 0.88
CDC42EP1-201ENST00000249014 AMHR2Q16671 573 aa20.56■□□□□ 0.88
CDC42EP1-201ENST00000249014 CCDC142Q17RM4 750 aa20.56■□□□□ 0.88
CDC42EP1-201ENST00000249014 TAX1BP1Q86VP1 789 aa20.56■□□□□ 0.88
CDC42EP1-201ENST00000249014 XYLT1Q86Y38 959 aa20.56■□□□□ 0.88
CDC42EP1-201ENST00000249014 ELOVL4Q9GZR5 314 aa20.56■□□□□ 0.88
CDC42EP1-201ENST00000249014 C10orf88Q9H8K7 445 aa20.56■□□□□ 0.88
CDC42EP1-201ENST00000249014 METTL5Q9NRN9 209 aaKnown RBP20.56■□□□□ 0.88
CDC42EP1-201ENST00000249014 ERAP1Q9NZ08 941 aa20.56■□□□□ 0.88
CDC42EP1-201ENST00000249014 A0A087WZ62 844 aa20.56■□□□□ 0.88
CDC42EP1-201ENST00000249014 INSRRP14616 1297 aa20.56■□□□□ 0.88
CDC42EP1-201ENST00000249014 TTLL4Q14679 1199 aa20.56■□□□□ 0.88
CDC42EP1-201ENST00000249014 GDAP1Q8TB36 358 aa20.56■□□□□ 0.88
CDC42EP1-201ENST00000249014 MAML1Q92585 1016 aa20.56■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms