RNA–Protein interactions for RNA: ENST00000247225.6

SGPP1-201, Transcript of sphingosine-1-phosphate phosphatase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SGPP1, Length 3,312 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGPP1-201ENST00000247225 PPFIBP2Q8ND30 876 aa17.72■□□□□ 0.43
SGPP1-201ENST00000247225 LRMDAQ9H2I8 198 aa17.72■□□□□ 0.43
SGPP1-201ENST00000247225 PARVAQ9NVD7 372 aa17.72■□□□□ 0.43
SGPP1-201ENST00000247225 MEI4A8MW99 385 aa17.72■□□□□ 0.43
SGPP1-201ENST00000247225 H0YIN7 160 aa17.72■□□□□ 0.43
SGPP1-201ENST00000247225 H7C0C1 242 aa17.72■□□□□ 0.43
SGPP1-201ENST00000247225 USP1O94782 785 aa17.72■□□□□ 0.43
SGPP1-201ENST00000247225 ATP5OP48047 213 aa17.72■□□□□ 0.43
SGPP1-201ENST00000247225 GEMIN4P57678 1058 aaKnown RBP17.72■□□□□ 0.43
SGPP1-201ENST00000247225 GPX6P59796 221 aa17.72■□□□□ 0.43
SGPP1-201ENST00000247225 ABRAQ8N0Z2 381 aa17.72■□□□□ 0.43
SGPP1-201ENST00000247225 KCTD6Q8NC69 237 aa17.72■□□□□ 0.43
SGPP1-201ENST00000247225 C10orf82Q8WW14 230 aa17.72■□□□□ 0.43
SGPP1-201ENST00000247225 WNK4Q96J92 1243 aa17.72■□□□□ 0.43
SGPP1-201ENST00000247225 SLITRK1Q96PX8 696 aa17.72■□□□□ 0.43
SGPP1-201ENST00000247225 G3BP2Q9UN86 482 aaKnown RBP17.72■□□□□ 0.43
SGPP1-201ENST00000247225 RREB1Q92766 1687 aa17.71■□□□□ 0.43
SGPP1-201ENST00000247225 TXNDC9O14530 226 aa17.71■□□□□ 0.43
SGPP1-201ENST00000247225 CYB561D2O14569 222 aa17.71■□□□□ 0.43
SGPP1-201ENST00000247225 CSDE1O75534 798 aaKnown RBP17.71■□□□□ 0.43
SGPP1-201ENST00000247225 ALADP13716 330 aa17.71■□□□□ 0.43
SGPP1-201ENST00000247225 CCNB1P14635 433 aa17.71■□□□□ 0.43
SGPP1-201ENST00000247225 NOMO3P69849 1222 aa17.71■□□□□ 0.43
SGPP1-201ENST00000247225 TMPRSS15P98073 1019 aa17.71■□□□□ 0.43
SGPP1-201ENST00000247225 NCOA4Q13772 614 aa17.71■□□□□ 0.43
SGPP1-201ENST00000247225 RINLQ6ZS11 566 aa17.71■□□□□ 0.43
SGPP1-201ENST00000247225 ARID3BQ8IVW6 561 aaPredicted RBP17.71■□□□□ 0.43
SGPP1-201ENST00000247225 VTI1AQ96AJ9 217 aa17.71■□□□□ 0.43
SGPP1-201ENST00000247225 SLC9A2Q9UBY0 812 aa17.71■□□□□ 0.43
SGPP1-201ENST00000247225 TOP3BO95985 862 aaKnown RBP17.71■□□□□ 0.43
SGPP1-201ENST00000247225 KLRC2P26717 231 aa17.71■□□□□ 0.43
SGPP1-201ENST00000247225 PTPN4P29074 926 aa17.71■□□□□ 0.43
SGPP1-201ENST00000247225 CAP2P40123 477 aa17.71■□□□□ 0.43
SGPP1-201ENST00000247225 YARSP54577 528 aaKnown RBP17.71■□□□□ 0.43
SGPP1-201ENST00000247225 EPHB1P54762 984 aa17.71■□□□□ 0.43
SGPP1-201ENST00000247225 ACSBG2Q5FVE4 666 aa17.71■□□□□ 0.43
SGPP1-201ENST00000247225 SLC27A3Q5K4L6 730 aa17.71■□□□□ 0.43
SGPP1-201ENST00000247225 AP1ARQ63HQ0 302 aa17.71■□□□□ 0.43
SGPP1-201ENST00000247225 DARS2Q6PI48 645 aaKnown RBP17.71■□□□□ 0.43
SGPP1-201ENST00000247225 SYDE1Q6ZW31 735 aaPredicted RBP17.71■□□□□ 0.43
SGPP1-201ENST00000247225 UNC45BQ8IWX7 931 aa17.71■□□□□ 0.43
SGPP1-201ENST00000247225 CYP4F11Q9HBI6 524 aa17.71■□□□□ 0.43
SGPP1-201ENST00000247225 ZNF277Q9NRM2 450 aaPredicted RBP17.71■□□□□ 0.43
SGPP1-201ENST00000247225 PACSIN3Q9UKS6 424 aa17.71■□□□□ 0.43
SGPP1-201ENST00000247225 TNFSF9P41273 254 aa17.7■□□□□ 0.42
SGPP1-201ENST00000247225 ARL4CP56559 192 aa17.7■□□□□ 0.42
SGPP1-201ENST00000247225 BPIFB4P59827 614 aa17.7■□□□□ 0.42
SGPP1-201ENST00000247225 SATB1Q01826 763 aa17.7■□□□□ 0.42
SGPP1-201ENST00000247225 MMRN1Q13201 1228 aa17.7■□□□□ 0.42
SGPP1-201ENST00000247225 PTK7Q13308 1070 aa17.7■□□□□ 0.42
SGPP1-201ENST00000247225 KLF1Q13351 362 aaPredicted RBP17.7■□□□□ 0.42
SGPP1-201ENST00000247225 TRPC3Q13507 836 aa17.7■□□□□ 0.42
SGPP1-201ENST00000247225 WDR72Q3MJ13 1102 aa17.7■□□□□ 0.42
SGPP1-201ENST00000247225 MON1BQ7L1V2 547 aa17.7■□□□□ 0.42
SGPP1-201ENST00000247225 CCNJLQ8IV13 435 aa17.7■□□□□ 0.42
SGPP1-201ENST00000247225 MAP4K3Q8IVH8 894 aa17.7■□□□□ 0.42
SGPP1-201ENST00000247225 PDIK1LQ8N165 341 aa17.7■□□□□ 0.42
SGPP1-201ENST00000247225 LARGE2Q8N3Y3 721 aa17.7■□□□□ 0.42
SGPP1-201ENST00000247225 EXD1Q8NHP7 514 aa17.7■□□□□ 0.42
SGPP1-201ENST00000247225 FBXO27Q8NI29 283 aa17.7■□□□□ 0.42
SGPP1-201ENST00000247225 USP6NLQ92738 828 aa17.7■□□□□ 0.42
SGPP1-201ENST00000247225 MTMR12Q9C0I1 747 aa17.7■□□□□ 0.42
SGPP1-201ENST00000247225 RANBP17Q9H2T7 1088 aaKnown RBP17.7■□□□□ 0.42
SGPP1-201ENST00000247225 RIPK3Q9Y572 518 aa17.7■□□□□ 0.42
SGPP1-201ENST00000247225 PCDHA10Q9Y5I2 948 aa17.7■□□□□ 0.42
SGPP1-201ENST00000247225 ARFGEF1Q9Y6D6 1849 aa17.7■□□□□ 0.42
SGPP1-201ENST00000247225 STAM2O75886 525 aa17.7■□□□□ 0.42
SGPP1-201ENST00000247225 ELK3P41970 407 aa17.7■□□□□ 0.42
SGPP1-201ENST00000247225 CDH8P55286 799 aa17.7■□□□□ 0.42
SGPP1-201ENST00000247225 CFAP157Q5JU67 520 aa17.7■□□□□ 0.42
SGPP1-201ENST00000247225 RASIP1Q5U651 963 aa17.7■□□□□ 0.42
SGPP1-201ENST00000247225 AGR3Q8TD06 166 aa17.7■□□□□ 0.42
SGPP1-201ENST00000247225 CNKSR1Q969H4 720 aa17.7■□□□□ 0.42
SGPP1-201ENST00000247225 ZNF70Q9UC06 446 aaPredicted RBP17.7■□□□□ 0.42
SGPP1-201ENST00000247225 SMG5Q9UPR3 1016 aaKnown RBP17.7■□□□□ 0.42
SGPP1-201ENST00000247225 ZNF541Q9H0D2 1346 aa17.7■□□□□ 0.42
SGPP1-201ENST00000247225 COL14A1Q05707 1796 aaKnown RBP17.7■□□□□ 0.42
SGPP1-201ENST00000247225 KCNA3P22001 575 aa17.7■□□□□ 0.42
SGPP1-201ENST00000247225 AMPD1P23109 780 aa17.7■□□□□ 0.42
SGPP1-201ENST00000247225 RFC1P35251 1148 aaPredicted RBP17.7■□□□□ 0.42
SGPP1-201ENST00000247225 MYL6P60660 151 aa17.7■□□□□ 0.42
SGPP1-201ENST00000247225 MOGSQ13724 837 aa17.7■□□□□ 0.42
SGPP1-201ENST00000247225 KBTBD12Q3ZCT8 623 aa17.7■□□□□ 0.42
SGPP1-201ENST00000247225 STOML1Q9UBI4 398 aa17.7■□□□□ 0.42
SGPP1-201ENST00000247225 IP6K2Q9UHH9 426 aa17.7■□□□□ 0.42
SGPP1-201ENST00000247225 LGALS13Q9UHV8 139 aa17.7■□□□□ 0.42
SGPP1-201ENST00000247225 XIRP1Q702N8 1843 aaKnown RBP17.69■□□□□ 0.42
SGPP1-201ENST00000247225 PHBP35232 272 aa17.69■□□□□ 0.42
SGPP1-201ENST00000247225 PRKCEQ02156 737 aa17.69■□□□□ 0.42
SGPP1-201ENST00000247225 LMNB2Q03252 620 aa17.69■□□□□ 0.42
SGPP1-201ENST00000247225 RCOR2Q8IZ40 523 aa17.69■□□□□ 0.42
SGPP1-201ENST00000247225 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP17.69■□□□□ 0.42
SGPP1-201ENST00000247225 POU5F2Q8N7G0 328 aa17.69■□□□□ 0.42
SGPP1-201ENST00000247225 RBM41Q96IZ5 413 aaKnown RBP17.69■□□□□ 0.42
SGPP1-201ENST00000247225 FAM81BQ96LP2 452 aa17.69■□□□□ 0.42
SGPP1-201ENST00000247225 TBC1D22BQ9NU19 505 aa17.69■□□□□ 0.42
SGPP1-201ENST00000247225 GPATCH2LQ9NWQ4 482 aa17.69■□□□□ 0.42
SGPP1-201ENST00000247225 C2CD2Q9Y426 696 aa17.69■□□□□ 0.42
SGPP1-201ENST00000247225 ATP5HO75947 161 aa17.69■□□□□ 0.42
SGPP1-201ENST00000247225 PGM5Q15124 567 aa17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms