RNA–Protein interactions for RNA: ENST00000236671.6

CTSD-201, Transcript of cathepsin D, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CTSD, Length 2,123 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-201ENST00000236671 EDN1P05305 212 aa16.37■□□□□ 0.21
CTSD-201ENST00000236671 GLRA2P23416 452 aa16.37■□□□□ 0.21
CTSD-201ENST00000236671 YARSP54577 528 aaKnown RBP16.37■□□□□ 0.21
CTSD-201ENST00000236671 VCPP55072 806 aaKnown RBP16.37■□□□□ 0.21
CTSD-201ENST00000236671 OGDHQ02218 1023 aa16.37■□□□□ 0.21
CTSD-201ENST00000236671 WDR72Q3MJ13 1102 aa16.37■□□□□ 0.21
CTSD-201ENST00000236671 TXNRD3NBQ6F5E7 133 aa16.37■□□□□ 0.21
CTSD-201ENST00000236671 UTP4Q969X6 686 aaKnown RBP16.37■□□□□ 0.21
CTSD-201ENST00000236671 MCEEQ96PE7 176 aa16.37■□□□□ 0.21
CTSD-201ENST00000236671 MSTO1Q9BUK6 570 aa16.37■□□□□ 0.21
CTSD-201ENST00000236671 TXLNGQ9NUQ3 528 aa16.37■□□□□ 0.21
CTSD-201ENST00000236671 SENP1Q9P0U3 644 aa16.37■□□□□ 0.21
CTSD-201ENST00000236671 ANKFY1Q9P2R3 1169 aa16.37■□□□□ 0.21
CTSD-201ENST00000236671 ADGRA2Q96PE1 1338 aa16.36■□□□□ 0.21
CTSD-201ENST00000236671 A0A0B4J269 797 aa16.36■□□□□ 0.21
CTSD-201ENST00000236671 F8VP50 259 aa16.36■□□□□ 0.21
CTSD-201ENST00000236671 ALOX15BO15296 676 aa16.36■□□□□ 0.21
CTSD-201ENST00000236671 RPA3P35244 121 aaPredicted RBP16.36■□□□□ 0.21
CTSD-201ENST00000236671 CLNS1AP54105 237 aaKnown RBP16.36■□□□□ 0.21
CTSD-201ENST00000236671 FKBP1BP68106 108 aa16.36■□□□□ 0.21
CTSD-201ENST00000236671 NCOA4Q13772 614 aa16.36■□□□□ 0.21
CTSD-201ENST00000236671 PDK4Q16654 411 aa16.36■□□□□ 0.21
CTSD-201ENST00000236671 ZFYVE27Q5T4F4 411 aa16.36■□□□□ 0.21
CTSD-201ENST00000236671 SLFN12LQ6IEE8 588 aa16.36■□□□□ 0.21
CTSD-201ENST00000236671 C4orf33Q8N1A6 199 aa16.36■□□□□ 0.21
CTSD-201ENST00000236671 REPS2Q8NFH8 660 aa16.36■□□□□ 0.21
CTSD-201ENST00000236671 NSUN6Q8TEA1 469 aaKnown RBP16.36■□□□□ 0.21
CTSD-201ENST00000236671 NKD2Q969F2 451 aaPredicted RBP16.36■□□□□ 0.21
CTSD-201ENST00000236671 ACSF2Q96CM8 615 aaPredicted RBP16.36■□□□□ 0.21
CTSD-201ENST00000236671 ERP27Q96DN0 273 aa16.36■□□□□ 0.21
CTSD-201ENST00000236671 SMC6Q96SB8 1091 aa16.36■□□□□ 0.21
CTSD-201ENST00000236671 TARS2Q9BW92 718 aaKnown RBP16.36■□□□□ 0.21
CTSD-201ENST00000236671 PORCNQ9H237 461 aa16.36■□□□□ 0.21
CTSD-201ENST00000236671 ETNK1Q9HBU6 452 aa16.36■□□□□ 0.21
CTSD-201ENST00000236671 SLCO1B3Q9NPD5 702 aa16.36■□□□□ 0.21
CTSD-201ENST00000236671 KCNG1Q9UIX4 513 aa16.36■□□□□ 0.21
CTSD-201ENST00000236671 SHOC2Q9UQ13 582 aa16.36■□□□□ 0.21
CTSD-201ENST00000236671 CHKBQ9Y259 395 aa16.36■□□□□ 0.21
CTSD-201ENST00000236671 CALB1P05937 261 aa16.36■□□□□ 0.21
CTSD-201ENST00000236671 ITGAVP06756 1048 aa16.36■□□□□ 0.21
CTSD-201ENST00000236671 SUPT20HL2P0C7V6 817 aa16.36■□□□□ 0.21
CTSD-201ENST00000236671 KRT15P19012 456 aa16.36■□□□□ 0.21
CTSD-201ENST00000236671 ATP4AP20648 1035 aa16.36■□□□□ 0.21
CTSD-201ENST00000236671 NAMPTP43490 491 aa16.36■□□□□ 0.21
CTSD-201ENST00000236671 LACTBP83111 547 aaPredicted RBP16.36■□□□□ 0.21
CTSD-201ENST00000236671 RASA2Q15283 850 aa16.36■□□□□ 0.21
CTSD-201ENST00000236671 DEFB115Q30KQ5 88 aa16.36■□□□□ 0.21
CTSD-201ENST00000236671 CAPN12Q6ZSI9 719 aa16.36■□□□□ 0.21
CTSD-201ENST00000236671 ERICH1Q86X53 443 aa16.36■□□□□ 0.21
CTSD-201ENST00000236671 ZBED8Q8IZ13 594 aa16.36■□□□□ 0.21
CTSD-201ENST00000236671 HAUS1Q96CS2 278 aa16.36■□□□□ 0.21
CTSD-201ENST00000236671 THOC1Q96FV9 657 aaKnown RBP16.36■□□□□ 0.21
CTSD-201ENST00000236671 RSRC1Q96IZ7 334 aaKnown RBP16.36■□□□□ 0.21
CTSD-201ENST00000236671 LRMDAQ9H2I8 198 aa16.36■□□□□ 0.21
CTSD-201ENST00000236671 VPS37BQ9H9H4 285 aa16.36■□□□□ 0.21
CTSD-201ENST00000236671 USH1CQ9Y6N9 552 aa16.36■□□□□ 0.21
CTSD-201ENST00000236671 LRRIQ4A6NIV6 560 aa16.35■□□□□ 0.21
CTSD-201ENST00000236671 SPDYE5A6NIY4 337 aa16.35■□□□□ 0.21
CTSD-201ENST00000236671 TYROBPO43914 113 aa16.35■□□□□ 0.21
CTSD-201ENST00000236671 EDF1O60869 148 aaKnown RBP16.35■□□□□ 0.21
CTSD-201ENST00000236671 WFS1O76024 890 aa16.35■□□□□ 0.21
CTSD-201ENST00000236671 LDHAP00338 332 aaKnown RBP16.35■□□□□ 0.21
CTSD-201ENST00000236671 CDKN2BP42772 138 aa16.35■□□□□ 0.21
CTSD-201ENST00000236671 VEGFBP49765 207 aa16.35■□□□□ 0.21
CTSD-201ENST00000236671 HMGCS2P54868 508 aa16.35■□□□□ 0.21
CTSD-201ENST00000236671 SLC1A5Q15758 541 aa16.35■□□□□ 0.21
CTSD-201ENST00000236671 TFDP3Q5H9I0 405 aa16.35■□□□□ 0.21
CTSD-201ENST00000236671 NOL9Q5SY16 702 aaKnown RBP16.35■□□□□ 0.21
CTSD-201ENST00000236671 SNRNP48Q6IEG0 339 aaKnown RBP16.35■□□□□ 0.21
CTSD-201ENST00000236671 DNAJC24Q6P3W2 148 aa16.35■□□□□ 0.21
CTSD-201ENST00000236671 DEPTORQ8TB45 409 aa16.35■□□□□ 0.21
CTSD-201ENST00000236671 MIEF2Q96C03 454 aa16.35■□□□□ 0.21
CTSD-201ENST00000236671 PCDH9Q9HC56 1237 aa16.35■□□□□ 0.21
CTSD-201ENST00000236671 GINM1Q9NU53 330 aa16.35■□□□□ 0.21
CTSD-201ENST00000236671 FBXO40Q9UH90 709 aa16.35■□□□□ 0.21
CTSD-201ENST00000236671 AFG3L2Q9Y4W6 797 aa16.35■□□□□ 0.21
CTSD-201ENST00000236671 K7ERI5 159 aa16.34■□□□□ 0.21
CTSD-201ENST00000236671 LSM8O95777 96 aaKnown RBP16.34■□□□□ 0.21
CTSD-201ENST00000236671 ARL2P36404 184 aa16.34■□□□□ 0.21
CTSD-201ENST00000236671 SLC8A3P57103 927 aa16.34■□□□□ 0.21
CTSD-201ENST00000236671 CRYMQ14894 314 aa16.34■□□□□ 0.21
CTSD-201ENST00000236671 SETDB1Q15047 1291 aa16.34■□□□□ 0.21
CTSD-201ENST00000236671 PPP1R15BQ5SWA1 713 aa16.34■□□□□ 0.21
CTSD-201ENST00000236671 SPRYD7Q5W111 196 aa16.34■□□□□ 0.21
CTSD-201ENST00000236671 CENPUQ71F23 418 aa16.34■□□□□ 0.21
CTSD-201ENST00000236671 MAB21L3Q8N8X9 362 aa16.34■□□□□ 0.21
CTSD-201ENST00000236671 CDHR1Q96JP9 859 aa16.34■□□□□ 0.21
CTSD-201ENST00000236671 CAPNS2Q96L46 248 aa16.34■□□□□ 0.21
CTSD-201ENST00000236671 TMEM121Q9BTD3 319 aa16.34■□□□□ 0.21
CTSD-201ENST00000236671 DHX33Q9H6R0 707 aaKnown RBP16.34■□□□□ 0.21
CTSD-201ENST00000236671 PPCSQ9HAB8 311 aa16.34■□□□□ 0.21
CTSD-201ENST00000236671 SLC24A2Q9UI40 661 aa16.34■□□□□ 0.21
CTSD-201ENST00000236671 COL11A1P12107 1806 aaPredicted RBP16.34■□□□□ 0.21
CTSD-201ENST00000236671 SPATA31C2B4DYI2 1134 aa16.34■□□□□ 0.21
CTSD-201ENST00000236671 DIAPH2O60879 1101 aa16.34■□□□□ 0.21
CTSD-201ENST00000236671 BANF1O75531 89 aa16.34■□□□□ 0.21
CTSD-201ENST00000236671 ASS1P00966 412 aaKnown RBP16.34■□□□□ 0.21
CTSD-201ENST00000236671 CA4P22748 312 aa16.34■□□□□ 0.21
CTSD-201ENST00000236671 ATP11AP98196 1134 aa16.34■□□□□ 0.21
CTSD-201ENST00000236671 PDIA2Q13087 525 aaKnown RBP16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms