RNA–Protein interactions for RNA: ENST00000231130.3

PCDHB3-201, Transcript of protocadherin beta 3, humanhuman

APPRIS P1 BASIC

Gene PCDHB3, Length 3,355 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB3-201ENST00000231130 NR1H3Q13133 447 aa14.85□□□□□ -0.03
PCDHB3-201ENST00000231130 ZNF394Q53GI3 561 aa14.85□□□□□ -0.03
PCDHB3-201ENST00000231130 LRRC8BQ6P9F7 803 aa14.85□□□□□ -0.03
PCDHB3-201ENST00000231130 MCOLN2Q8IZK6 566 aa14.85□□□□□ -0.03
PCDHB3-201ENST00000231130 SHC3Q92529 594 aa14.85□□□□□ -0.03
PCDHB3-201ENST00000231130 RAB20Q9NX57 234 aa14.85□□□□□ -0.03
PCDHB3-201ENST00000231130 SH3GLB1Q9Y371 365 aa14.85□□□□□ -0.03
PCDHB3-201ENST00000231130 CCDC195A0A1B0GUA6 201 aa14.85□□□□□ -0.03
PCDHB3-201ENST00000231130 TRIM43BA6NCK2 446 aa14.85□□□□□ -0.03
PCDHB3-201ENST00000231130 SIGLEC16A6NMB1 481 aa14.85□□□□□ -0.03
PCDHB3-201ENST00000231130 TLR3O15455 904 aaKnown RBP14.85□□□□□ -0.03
PCDHB3-201ENST00000231130 ENO1P06733 434 aaKnown RBP14.85□□□□□ -0.03
PCDHB3-201ENST00000231130 JAG1P78504 1218 aa14.85□□□□□ -0.03
PCDHB3-201ENST00000231130 CMPK2Q5EBM0 449 aa14.85□□□□□ -0.03
PCDHB3-201ENST00000231130 DPY19L2Q6NUT2 758 aa14.85□□□□□ -0.03
PCDHB3-201ENST00000231130 KLC3Q6P597 504 aa14.85□□□□□ -0.03
PCDHB3-201ENST00000231130 ZBTB8BQ8NAP8 495 aaPredicted RBP14.85□□□□□ -0.03
PCDHB3-201ENST00000231130 DCAF4Q8WV16 495 aa14.85□□□□□ -0.03
PCDHB3-201ENST00000231130 BTBD7Q9P203 1132 aa14.85□□□□□ -0.03
PCDHB3-201ENST00000231130 LGALS13Q9UHV8 139 aa14.85□□□□□ -0.03
PCDHB3-201ENST00000231130 ARHGAP42A6NI28 874 aa14.85□□□□□ -0.03
PCDHB3-201ENST00000231130 KRT1P04264 644 aa14.85□□□□□ -0.03
PCDHB3-201ENST00000231130 CCDC166P0CW27 439 aa14.85□□□□□ -0.03
PCDHB3-201ENST00000231130 TNNI1P19237 187 aa14.85□□□□□ -0.03
PCDHB3-201ENST00000231130 MLH1P40692 756 aa14.85□□□□□ -0.03
PCDHB3-201ENST00000231130 NRLP54845 237 aa14.85□□□□□ -0.03
PCDHB3-201ENST00000231130 SH3BGRP55822 239 aaPredicted RBP14.85□□□□□ -0.03
PCDHB3-201ENST00000231130 CAV1Q03135 178 aa14.85□□□□□ -0.03
PCDHB3-201ENST00000231130 TTLL12Q14166 644 aaPredicted RBP14.85□□□□□ -0.03
PCDHB3-201ENST00000231130 C1orf146Q5VVC0 180 aa14.85□□□□□ -0.03
PCDHB3-201ENST00000231130 RINLQ6ZS11 566 aa14.85□□□□□ -0.03
PCDHB3-201ENST00000231130 ZNF554Q86TJ5 538 aa14.85□□□□□ -0.03
PCDHB3-201ENST00000231130 CPXCR1Q8N123 301 aa14.85□□□□□ -0.03
PCDHB3-201ENST00000231130 FBXL13Q8NEE6 735 aa14.85□□□□□ -0.03
PCDHB3-201ENST00000231130 PYROXD1Q8WU10 500 aa14.85□□□□□ -0.03
PCDHB3-201ENST00000231130 CCDC17Q96LX7 622 aa14.85□□□□□ -0.03
PCDHB3-201ENST00000231130 NR1H4Q96RI1 486 aaPredicted RBP14.85□□□□□ -0.03
PCDHB3-201ENST00000231130 EBF3Q9H4W6 596 aa14.85□□□□□ -0.03
PCDHB3-201ENST00000231130 STX18Q9P2W9 335 aaKnown RBP14.85□□□□□ -0.03
PCDHB3-201ENST00000231130 H3BRJ5 948 aa14.84□□□□□ -0.03
PCDHB3-201ENST00000231130 GYS1P13807 737 aa14.84□□□□□ -0.03
PCDHB3-201ENST00000231130 ALOX15P16050 662 aaPredicted RBP14.84□□□□□ -0.03
PCDHB3-201ENST00000231130 RFX1P22670 979 aa14.84□□□□□ -0.03
PCDHB3-201ENST00000231130 MAN1A1P33908 653 aa14.84□□□□□ -0.03
PCDHB3-201ENST00000231130 IRX4P78413 519 aa14.84□□□□□ -0.03
PCDHB3-201ENST00000231130 XKR9Q5GH70 373 aa14.84□□□□□ -0.03
PCDHB3-201ENST00000231130 C3orf62Q6ZUJ4 267 aa14.84□□□□□ -0.03
PCDHB3-201ENST00000231130 SV2AQ7L0J3 742 aa14.84□□□□□ -0.03
PCDHB3-201ENST00000231130 RHPN2Q8IUC4 686 aa14.84□□□□□ -0.03
PCDHB3-201ENST00000231130 PIP4K2CQ8TBX8 421 aa14.84□□□□□ -0.03
PCDHB3-201ENST00000231130 HSPBAP1Q96EW2 488 aa14.84□□□□□ -0.03
PCDHB3-201ENST00000231130 FAM111AQ96PZ2 611 aa14.84□□□□□ -0.03
PCDHB3-201ENST00000231130 FAM213AQ9BRX8 229 aa14.84□□□□□ -0.03
PCDHB3-201ENST00000231130 TRIM55Q9BYV6 548 aa14.84□□□□□ -0.03
PCDHB3-201ENST00000231130 TMEM206Q9H813 350 aa14.84□□□□□ -0.03
PCDHB3-201ENST00000231130 FBXO28Q9NVF7 368 aa14.84□□□□□ -0.03
PCDHB3-201ENST00000231130 ANKFY1Q9P2R3 1169 aa14.84□□□□□ -0.03
PCDHB3-201ENST00000231130 ATP8B3O60423 1300 aa14.84□□□□□ -0.03
PCDHB3-201ENST00000231130 ARFGEF1Q9Y6D6 1849 aa14.84□□□□□ -0.03
PCDHB3-201ENST00000231130 B2RBV5 119 aa14.84□□□□□ -0.03
PCDHB3-201ENST00000231130 PDLIM1O00151 329 aa14.84□□□□□ -0.03
PCDHB3-201ENST00000231130 PIK3CDO00329 1044 aa14.84□□□□□ -0.03
PCDHB3-201ENST00000231130 CCR3P51677 355 aa14.84□□□□□ -0.03
PCDHB3-201ENST00000231130 RPL7AP62424 266 aaKnown RBP14.84□□□□□ -0.03
PCDHB3-201ENST00000231130 HPCAP84074 193 aa14.84□□□□□ -0.03
PCDHB3-201ENST00000231130 ACAP1Q15027 740 aa14.84□□□□□ -0.03
PCDHB3-201ENST00000231130 CLEC16AQ2KHT3 1053 aa14.84□□□□□ -0.03
PCDHB3-201ENST00000231130 APOBEC3HQ6NTF7 200 aaKnown RBP14.84□□□□□ -0.03
PCDHB3-201ENST00000231130 RBM44Q6ZP01 1051 aaKnown RBP14.84□□□□□ -0.03
PCDHB3-201ENST00000231130 HELQQ8TDG4 1101 aa14.84□□□□□ -0.03
PCDHB3-201ENST00000231130 MKL1Q969V6 931 aa14.84□□□□□ -0.03
PCDHB3-201ENST00000231130 NSL1Q96IY1 281 aa14.84□□□□□ -0.03
PCDHB3-201ENST00000231130 ECSITQ9BQ95 431 aa14.84□□□□□ -0.03
PCDHB3-201ENST00000231130 THTPAQ9BU02 230 aa14.84□□□□□ -0.03
PCDHB3-201ENST00000231130 WDR11Q9BZH6 1224 aa14.84□□□□□ -0.03
PCDHB3-201ENST00000231130 ATP2A1O14983 1001 aa14.84□□□□□ -0.03
PCDHB3-201ENST00000231130 PDE5AO76074 875 aa14.84□□□□□ -0.03
PCDHB3-201ENST00000231130 BGNP21810 368 aa14.84□□□□□ -0.03
PCDHB3-201ENST00000231130 SMTNL2Q2TAL5 461 aa14.84□□□□□ -0.03
PCDHB3-201ENST00000231130 TMEM270Q6UE05 265 aa14.84□□□□□ -0.03
PCDHB3-201ENST00000231130 MFSD7Q6UXD7 560 aa14.84□□□□□ -0.03
PCDHB3-201ENST00000231130 TRIM50Q86XT4 487 aa14.84□□□□□ -0.03
PCDHB3-201ENST00000231130 RHOT1Q8IXI2 618 aa14.84□□□□□ -0.03
PCDHB3-201ENST00000231130 PALM2Q8IXS6 379 aa14.84□□□□□ -0.03
PCDHB3-201ENST00000231130 ACER1Q8TDN7 264 aa14.84□□□□□ -0.03
PCDHB3-201ENST00000231130 TSSK1BQ9BXA7 367 aa14.84□□□□□ -0.03
PCDHB3-201ENST00000231130 ZNF212Q9UDV6 495 aa14.84□□□□□ -0.03
PCDHB3-201ENST00000231130 ZHX2Q9Y6X8 837 aa14.84□□□□□ -0.03
PCDHB3-201ENST00000231130 PCNTO95613 3336 aa14.83□□□□□ -0.03
PCDHB3-201ENST00000231130 SERPINB2P05120 415 aa14.83□□□□□ -0.04
PCDHB3-201ENST00000231130 CRKP46108 304 aa14.83□□□□□ -0.04
PCDHB3-201ENST00000231130 SMAD1Q15797 465 aaKnown RBP14.83□□□□□ -0.04
PCDHB3-201ENST00000231130 SLC15A2Q16348 729 aa14.83□□□□□ -0.04
PCDHB3-201ENST00000231130 GSTA3Q16772 222 aa14.83□□□□□ -0.04
PCDHB3-201ENST00000231130 MMEL1Q495T6 779 aa14.83□□□□□ -0.04
PCDHB3-201ENST00000231130 GADD45GIP1Q8TAE8 222 aaPredicted RBP14.83□□□□□ -0.04
PCDHB3-201ENST00000231130 DENND1AQ8TEH3 1009 aa14.83□□□□□ -0.04
PCDHB3-201ENST00000231130 TMEM120AQ9BXJ8 343 aa14.83□□□□□ -0.04
PCDHB3-201ENST00000231130 MANSC1Q9H8J5 431 aa14.83□□□□□ -0.04
PCDHB3-201ENST00000231130 FAM237BA0A1B0GVD1 139 aa14.83□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms