RNA–Protein interactions for RNA: ENST00000229829.6

HLA-DOA-201, Transcript of major histocompatibility complex, class II, DO alpha, humanhuman

APPRIS P1 BASIC

Gene HLA-DOA, Length 3,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOA-201ENST00000229829 DNAJC1Q96KC8 554 aaKnown RBP9.9□□□□□ -0.83
HLA-DOA-201ENST00000229829 LRRC37BQ96QE4 947 aa9.9□□□□□ -0.83
HLA-DOA-201ENST00000229829 TTC1Q99614 292 aa9.9□□□□□ -0.83
HLA-DOA-201ENST00000229829 SAYSD1Q9NPB0 183 aa9.9□□□□□ -0.83
HLA-DOA-201ENST00000229829 STOML1Q9UBI4 398 aa9.9□□□□□ -0.83
HLA-DOA-201ENST00000229829 GRID1Q9ULK0 1009 aa9.9□□□□□ -0.83
HLA-DOA-201ENST00000229829 MGAMO43451 1857 aa9.9□□□□□ -0.83
HLA-DOA-201ENST00000229829 TLR3O15455 904 aaKnown RBP9.89□□□□□ -0.83
HLA-DOA-201ENST00000229829 VNN1O95497 513 aa9.89□□□□□ -0.83
HLA-DOA-201ENST00000229829 SERPINB3P29508 390 aa9.89□□□□□ -0.83
HLA-DOA-201ENST00000229829 ATP5DP30049 168 aa9.89□□□□□ -0.83
HLA-DOA-201ENST00000229829 MTM1Q13496 603 aa9.89□□□□□ -0.83
HLA-DOA-201ENST00000229829 IRF5Q13568 498 aa9.89□□□□□ -0.83
HLA-DOA-201ENST00000229829 FAM182AQ5T1J6 154 aa9.89□□□□□ -0.83
HLA-DOA-201ENST00000229829 ZFYVE27Q5T4F4 411 aa9.89□□□□□ -0.83
HLA-DOA-201ENST00000229829 TXNRD3NBQ6F5E7 133 aa9.89□□□□□ -0.83
HLA-DOA-201ENST00000229829 MCF2L2Q86YR7 1114 aa9.89□□□□□ -0.83
HLA-DOA-201ENST00000229829 C4orf33Q8N1A6 199 aa9.89□□□□□ -0.83
HLA-DOA-201ENST00000229829 MAGEB18Q96M61 343 aa9.89□□□□□ -0.83
HLA-DOA-201ENST00000229829 SMC6Q96SB8 1091 aa9.89□□□□□ -0.83
HLA-DOA-201ENST00000229829 NTPCRQ9BSD7 190 aaKnown RBP9.89□□□□□ -0.83
HLA-DOA-201ENST00000229829 RXFP1Q9HBX9 757 aa9.89□□□□□ -0.83
HLA-DOA-201ENST00000229829 PXMP2Q9NR77 195 aa9.89□□□□□ -0.83
HLA-DOA-201ENST00000229829 ANKEF1Q9NU02 776 aa9.89□□□□□ -0.83
HLA-DOA-201ENST00000229829 ZNF541Q9H0D2 1346 aa9.89□□□□□ -0.83
HLA-DOA-201ENST00000229829 TCEA3O75764 348 aa9.89□□□□□ -0.83
HLA-DOA-201ENST00000229829 STBD1O95210 358 aa9.89□□□□□ -0.83
HLA-DOA-201ENST00000229829 TPBGLP0DKB5 382 aa9.89□□□□□ -0.83
HLA-DOA-201ENST00000229829 ACO1P21399 889 aaKnown RBP9.89□□□□□ -0.83
HLA-DOA-201ENST00000229829 SLC1A1P43005 524 aa9.89□□□□□ -0.83
HLA-DOA-201ENST00000229829 IGBP1P78318 339 aa9.89□□□□□ -0.83
HLA-DOA-201ENST00000229829 BRDTQ58F21 947 aaPredicted RBP9.89□□□□□ -0.83
HLA-DOA-201ENST00000229829 ARHGEF16Q5VV41 709 aa9.89□□□□□ -0.83
HLA-DOA-201ENST00000229829 RHOT1Q8IXI2 618 aa9.89□□□□□ -0.83
HLA-DOA-201ENST00000229829 OGFOD1Q8N543 542 aa9.89□□□□□ -0.83
HLA-DOA-201ENST00000229829 PDCD7Q8N8D1 485 aaKnown RBP9.89□□□□□ -0.83
HLA-DOA-201ENST00000229829 GMLQ99445 158 aa9.89□□□□□ -0.83
HLA-DOA-201ENST00000229829 C10orf88Q9H8K7 445 aa9.89□□□□□ -0.83
HLA-DOA-201ENST00000229829 SLC38A10Q9HBR0 1119 aa9.89□□□□□ -0.83
HLA-DOA-201ENST00000229829 ARHGEF3Q9NR81 526 aa9.89□□□□□ -0.83
HLA-DOA-201ENST00000229829 CYP39A1Q9NYL5 469 aa9.89□□□□□ -0.83
HLA-DOA-201ENST00000229829 LGALS13Q9UHV8 139 aa9.89□□□□□ -0.83
HLA-DOA-201ENST00000229829 WDR81Q562E7 1941 aa9.89□□□□□ -0.83
HLA-DOA-201ENST00000229829 LIN7AO14910 233 aaPredicted RBP9.88□□□□□ -0.83
HLA-DOA-201ENST00000229829 PEX11AO75192 247 aa9.88□□□□□ -0.83
HLA-DOA-201ENST00000229829 KRT36O76013 467 aa9.88□□□□□ -0.83
HLA-DOA-201ENST00000229829 NPTXRO95502 500 aa9.88□□□□□ -0.83
HLA-DOA-201ENST00000229829 ASNSP08243 561 aa9.88□□□□□ -0.83
HLA-DOA-201ENST00000229829 ATF7P17544 494 aaPredicted RBP9.88□□□□□ -0.83
HLA-DOA-201ENST00000229829 CPA2P48052 419 aa9.88□□□□□ -0.83
HLA-DOA-201ENST00000229829 NOMO3P69849 1222 aa9.88□□□□□ -0.83
HLA-DOA-201ENST00000229829 BAATQ14032 418 aaPredicted RBP9.88□□□□□ -0.83
HLA-DOA-201ENST00000229829 MTFR1Q15390 333 aa9.88□□□□□ -0.83
HLA-DOA-201ENST00000229829 PKN2Q16513 984 aaKnown RBP9.88□□□□□ -0.83
HLA-DOA-201ENST00000229829 ARHGEF18Q6ZSZ5 1173 aa9.88□□□□□ -0.83
HLA-DOA-201ENST00000229829 SYDE1Q6ZW31 735 aaPredicted RBP9.88□□□□□ -0.83
HLA-DOA-201ENST00000229829 ASRGL1Q7L266 308 aa9.88□□□□□ -0.83
HLA-DOA-201ENST00000229829 CCDC89Q8N998 374 aa9.88□□□□□ -0.83
HLA-DOA-201ENST00000229829 PLEKHG4BQ96PX9 1271 aa9.88□□□□□ -0.83
HLA-DOA-201ENST00000229829 YIPF2Q9BWQ6 316 aa9.88□□□□□ -0.83
HLA-DOA-201ENST00000229829 TBC1D10AQ9BXI6 508 aa9.88□□□□□ -0.83
HLA-DOA-201ENST00000229829 KIAA1683Q9H0B3 1180 aa9.88□□□□□ -0.83
HLA-DOA-201ENST00000229829 ZNF277Q9NRM2 450 aaPredicted RBP9.88□□□□□ -0.83
HLA-DOA-201ENST00000229829 ETNK2Q9NVF9 386 aa9.88□□□□□ -0.83
HLA-DOA-201ENST00000229829 DDX18Q9NVP1 670 aaKnown RBP9.88□□□□□ -0.83
HLA-DOA-201ENST00000229829 PCDHB4Q9Y5E5 795 aa9.88□□□□□ -0.83
HLA-DOA-201ENST00000229829 PCDHA10Q9Y5I2 948 aa9.88□□□□□ -0.83
HLA-DOA-201ENST00000229829 EXOC1LA0A1B0GW35 172 aa9.88□□□□□ -0.83
HLA-DOA-201ENST00000229829 C4BPAP04003 597 aaKnown RBP9.88□□□□□ -0.83
HLA-DOA-201ENST00000229829 GM2AP17900 193 aa9.88□□□□□ -0.83
HLA-DOA-201ENST00000229829 FUT4P22083 530 aa9.88□□□□□ -0.83
HLA-DOA-201ENST00000229829 GNA15P30679 374 aa9.88□□□□□ -0.83
HLA-DOA-201ENST00000229829 GTF2H1P32780 548 aa9.88□□□□□ -0.83
HLA-DOA-201ENST00000229829 MAN1A1P33908 653 aa9.88□□□□□ -0.83
HLA-DOA-201ENST00000229829 PIK3CAP42336 1068 aa9.88□□□□□ -0.83
HLA-DOA-201ENST00000229829 JAK3P52333 1124 aa9.88□□□□□ -0.83
HLA-DOA-201ENST00000229829 COG7P83436 770 aa9.88□□□□□ -0.83
HLA-DOA-201ENST00000229829 SEPT7Q16181 437 aaKnown RBP9.88□□□□□ -0.83
HLA-DOA-201ENST00000229829 ZACNQ401N2 412 aa9.88□□□□□ -0.83
HLA-DOA-201ENST00000229829 MFSD7Q6UXD7 560 aa9.88□□□□□ -0.83
HLA-DOA-201ENST00000229829 NCAPG2Q86XI2 1143 aa9.88□□□□□ -0.83
HLA-DOA-201ENST00000229829 UTP4Q969X6 686 aaKnown RBP9.88□□□□□ -0.83
HLA-DOA-201ENST00000229829 FNBP1Q96RU3 617 aa9.88□□□□□ -0.83
HLA-DOA-201ENST00000229829 TIPINQ9BVW5 301 aa9.88□□□□□ -0.83
HLA-DOA-201ENST00000229829 KIAA1586Q9HCI6 787 aa9.88□□□□□ -0.83
HLA-DOA-201ENST00000229829 SEPT9Q9UHD8 586 aaPredicted RBP9.88□□□□□ -0.83
HLA-DOA-201ENST00000229829 A0A1W2PPM1 405 aa9.88□□□□□ -0.83
HLA-DOA-201ENST00000229829 GOLGA8SH3BPF8 625 aa9.88□□□□□ -0.83
HLA-DOA-201ENST00000229829 GOLGA8MH3BSY2 632 aa9.88□□□□□ -0.83
HLA-DOA-201ENST00000229829 ZSCAN9O15535 394 aaPredicted RBP9.88□□□□□ -0.83
HLA-DOA-201ENST00000229829 APBA3O96018 575 aa9.88□□□□□ -0.83
HLA-DOA-201ENST00000229829 ALADP13716 330 aa9.88□□□□□ -0.83
HLA-DOA-201ENST00000229829 CAV1Q03135 178 aa9.88□□□□□ -0.83
HLA-DOA-201ENST00000229829 GAD2Q05329 585 aa9.88□□□□□ -0.83
HLA-DOA-201ENST00000229829 MYBPC3Q14896 1274 aa9.88□□□□□ -0.83
HLA-DOA-201ENST00000229829 WDR44Q5JSH3 913 aa9.88□□□□□ -0.83
HLA-DOA-201ENST00000229829 CCDC60Q8IWA6 550 aaPredicted RBP9.88□□□□□ -0.83
HLA-DOA-201ENST00000229829 TAB3Q8N5C8 712 aaPredicted RBP9.88□□□□□ -0.83
HLA-DOA-201ENST00000229829 SAMD3Q8N6K7 520 aa9.88□□□□□ -0.83
HLA-DOA-201ENST00000229829 MIPOL1Q8TD10 442 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms