RNA–Protein interactions for RNA: ENST00000227524.8

PRPF19-201, Transcript of pre-mRNA processing factor 19, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF19, Length 2,157 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF19-201ENST00000227524 EFHC2Q5JST6 749 aa18.4■□□□□ 0.54
PRPF19-201ENST00000227524 WASHC2DQ5SRD0 308 aa18.4■□□□□ 0.54
PRPF19-201ENST00000227524 CAPRIN2Q6IMN6 1127 aaKnown RBP18.4■□□□□ 0.54
PRPF19-201ENST00000227524 PPP1R2P3Q6NXS1 205 aa18.4■□□□□ 0.54
PRPF19-201ENST00000227524 ENDOVQ8N8Q3 282 aaKnown RBP18.4■□□□□ 0.54
PRPF19-201ENST00000227524 RMDN3Q96TC7 470 aa18.4■□□□□ 0.54
PRPF19-201ENST00000227524 FAM167BQ9BTA0 163 aa18.4■□□□□ 0.54
PRPF19-201ENST00000227524 SLC24A3Q9HC58 644 aa18.4■□□□□ 0.54
PRPF19-201ENST00000227524 SSU72Q9NP77 194 aaKnown RBP18.4■□□□□ 0.54
PRPF19-201ENST00000227524 XPNPEP1Q9NQW7 623 aa18.4■□□□□ 0.54
PRPF19-201ENST00000227524 PDLIM7Q9NR12 457 aa18.4■□□□□ 0.54
PRPF19-201ENST00000227524 PXMP2Q9NR77 195 aa18.4■□□□□ 0.54
PRPF19-201ENST00000227524 MAP3K20Q9NYL2 800 aaKnown RBP18.4■□□□□ 0.54
PRPF19-201ENST00000227524 CORO1CQ9ULV4 474 aaPredicted RBP18.4■□□□□ 0.54
PRPF19-201ENST00000227524 LRRC42Q9Y546 428 aa18.4■□□□□ 0.54
PRPF19-201ENST00000227524 IVNS1ABPQ9Y6Y0 642 aa18.4■□□□□ 0.54
PRPF19-201ENST00000227524 KIAA1217Q5T5P2 1943 aa18.4■□□□□ 0.54
PRPF19-201ENST00000227524 TMEM191CA6NGB0 347 aa18.4■□□□□ 0.54
PRPF19-201ENST00000227524 ZBED4O75132 1171 aa18.4■□□□□ 0.54
PRPF19-201ENST00000227524 BANF1O75531 89 aa18.4■□□□□ 0.54
PRPF19-201ENST00000227524 ZWINTO95229 277 aa18.4■□□□□ 0.54
PRPF19-201ENST00000227524 TMEM191BP0C7N4 346 aa18.4■□□□□ 0.54
PRPF19-201ENST00000227524 RTP1P59025 263 aa18.4■□□□□ 0.54
PRPF19-201ENST00000227524 VGLL4Q14135 290 aa18.4■□□□□ 0.54
PRPF19-201ENST00000227524 SLC45A4Q5BKX6 768 aa18.4■□□□□ 0.54
PRPF19-201ENST00000227524 NLRP9Q7RTR0 991 aa18.4■□□□□ 0.54
PRPF19-201ENST00000227524 ANKMY2Q8IV38 441 aa18.4■□□□□ 0.54
PRPF19-201ENST00000227524 MCPH1Q8NEM0 835 aa18.4■□□□□ 0.54
PRPF19-201ENST00000227524 HAUS1Q96CS2 278 aa18.4■□□□□ 0.54
PRPF19-201ENST00000227524 NUDCD1Q96RS6 583 aa18.4■□□□□ 0.54
PRPF19-201ENST00000227524 ADAM33Q9BZ11 813 aa18.4■□□□□ 0.54
PRPF19-201ENST00000227524 PCDH9Q9HC56 1237 aa18.4■□□□□ 0.54
PRPF19-201ENST00000227524 ZFP69BQ9UJL9 534 aa18.4■□□□□ 0.54
PRPF19-201ENST00000227524 ZMYND8Q9ULU4 1186 aaPredicted RBP18.4■□□□□ 0.54
PRPF19-201ENST00000227524 CNTN6Q9UQ52 1028 aa18.4■□□□□ 0.54
PRPF19-201ENST00000227524 hCG_1818297A0A087WSY0 165 aa18.39■□□□□ 0.53
PRPF19-201ENST00000227524 C2CD2LO14523 706 aa18.39■□□□□ 0.53
PRPF19-201ENST00000227524 ATP2A1O14983 1001 aa18.39■□□□□ 0.53
PRPF19-201ENST00000227524 PTPN7P35236 360 aa18.39■□□□□ 0.53
PRPF19-201ENST00000227524 ACOT2P49753 483 aa18.39■□□□□ 0.53
PRPF19-201ENST00000227524 GPX6P59796 221 aa18.39■□□□□ 0.53
PRPF19-201ENST00000227524 NOP14P78316 857 aaKnown RBP18.39■□□□□ 0.53
PRPF19-201ENST00000227524 WDR72Q3MJ13 1102 aa18.39■□□□□ 0.53
PRPF19-201ENST00000227524 CDCA2Q69YH5 1023 aaPredicted RBP18.39■□□□□ 0.53
PRPF19-201ENST00000227524 POLR3FQ9H1D9 316 aaPredicted RBP18.39■□□□□ 0.53
PRPF19-201ENST00000227524 NPHS2Q9NP85 383 aa18.39■□□□□ 0.53
PRPF19-201ENST00000227524 ZNF214Q9UL59 606 aaPredicted RBP18.39■□□□□ 0.53
PRPF19-201ENST00000227524 SIP14410 1827 aa18.39■□□□□ 0.53
PRPF19-201ENST00000227524 CLUHO75153 1309 aa18.38■□□□□ 0.53
PRPF19-201ENST00000227524 NDC80O14777 642 aa18.38■□□□□ 0.53
PRPF19-201ENST00000227524 DGAT1O75907 488 aa18.38■□□□□ 0.53
PRPF19-201ENST00000227524 ITGAVP06756 1048 aa18.38■□□□□ 0.53
PRPF19-201ENST00000227524 KRT4P19013 534 aa18.38■□□□□ 0.53
PRPF19-201ENST00000227524 MMP8P22894 467 aa18.38■□□□□ 0.53
PRPF19-201ENST00000227524 GEMIN4P57678 1058 aaKnown RBP18.38■□□□□ 0.53
PRPF19-201ENST00000227524 MAPK6Q16659 721 aa18.38■□□□□ 0.53
PRPF19-201ENST00000227524 LRRC38Q5VT99 294 aa18.38■□□□□ 0.53
PRPF19-201ENST00000227524 FYB2Q5VWT5 728 aa18.38■□□□□ 0.53
PRPF19-201ENST00000227524 TEX9Q8N6V9 391 aa18.38■□□□□ 0.53
PRPF19-201ENST00000227524 NKD2Q969F2 451 aaPredicted RBP18.38■□□□□ 0.53
PRPF19-201ENST00000227524 TLE6Q9H808 572 aa18.38■□□□□ 0.53
PRPF19-201ENST00000227524 LNPEPQ9UIQ6 1025 aa18.38■□□□□ 0.53
PRPF19-201ENST00000227524 RABGEF1Q9UJ41 708 aa18.38■□□□□ 0.53
PRPF19-201ENST00000227524 PTPN4P29074 926 aa18.38■□□□□ 0.53
PRPF19-201ENST00000227524 EFTUD2Q15029 972 aaKnown RBP eCLIP18.38■□□□□ 0.531e-11■■■■■ 34.3
PRPF19-201ENST00000227524 ARHGEF16Q5VV41 709 aa18.38■□□□□ 0.53
PRPF19-201ENST00000227524 CATSPERGQ6ZRH7 1159 aa18.38■□□□□ 0.53
PRPF19-201ENST00000227524 TTC8Q8TAM2 541 aa18.38■□□□□ 0.53
PRPF19-201ENST00000227524 ZNF398Q8TD17 642 aa18.38■□□□□ 0.53
PRPF19-201ENST00000227524 SH3TC2Q8TF17 1288 aa18.38■□□□□ 0.53
PRPF19-201ENST00000227524 CNKSR2Q8WXI2 1034 aa18.38■□□□□ 0.53
PRPF19-201ENST00000227524 ATP6V0A1Q93050 837 aa18.38■□□□□ 0.53
PRPF19-201ENST00000227524 ACSF2Q96CM8 615 aaPredicted RBP18.38■□□□□ 0.53
PRPF19-201ENST00000227524 TMEM121Q9BTD3 319 aa18.38■□□□□ 0.53
PRPF19-201ENST00000227524 AGO2Q9UKV8 859 aaKnown RBP18.38■□□□□ 0.53
PRPF19-201ENST00000227524 A6NHS1 94 aa18.37■□□□□ 0.53
PRPF19-201ENST00000227524 H0YCG3 227 aa18.37■□□□□ 0.53
PRPF19-201ENST00000227524 GOLGA8SH3BPF8 625 aa18.37■□□□□ 0.53
PRPF19-201ENST00000227524 GOLGA8MH3BSY2 632 aa18.37■□□□□ 0.53
PRPF19-201ENST00000227524 SGK1O00141 431 aa18.37■□□□□ 0.53
PRPF19-201ENST00000227524 GLRA2P23416 452 aa18.37■□□□□ 0.53
PRPF19-201ENST00000227524 TBXAS1P24557 533 aaPredicted RBP18.37■□□□□ 0.53
PRPF19-201ENST00000227524 HIF1AQ16665 826 aa18.37■□□□□ 0.53
PRPF19-201ENST00000227524 TRIM68Q6AZZ1 485 aa18.37■□□□□ 0.53
PRPF19-201ENST00000227524 TXNRD3NBQ6F5E7 133 aa18.37■□□□□ 0.53
PRPF19-201ENST00000227524 ASAP3Q8TDY4 903 aa18.37■□□□□ 0.53
PRPF19-201ENST00000227524 MCEEQ96PE7 176 aa18.37■□□□□ 0.53
PRPF19-201ENST00000227524 OSBPL1AQ9BXW6 950 aa18.37■□□□□ 0.53
PRPF19-201ENST00000227524 DENND2DQ9H6A0 471 aaPredicted RBP18.37■□□□□ 0.53
PRPF19-201ENST00000227524 SAR1AQ9NR31 198 aa18.37■□□□□ 0.53
PRPF19-201ENST00000227524 FETUBQ9UGM5 382 aa18.37■□□□□ 0.53
PRPF19-201ENST00000227524 SEPT9Q9UHD8 586 aaPredicted RBP18.37■□□□□ 0.53
PRPF19-201ENST00000227524 RPL26L1Q9UNX3 145 aaKnown RBP18.37■□□□□ 0.53
PRPF19-201ENST00000227524 FARP1Q9Y4F1 1045 aaPredicted RBP18.37■□□□□ 0.53
PRPF19-201ENST00000227524 NUB1Q9Y5A7 615 aa18.37■□□□□ 0.53
PRPF19-201ENST00000227524 F8VP50 259 aa18.37■□□□□ 0.53
PRPF19-201ENST00000227524 IFNB1P01574 187 aa18.37■□□□□ 0.53
PRPF19-201ENST00000227524 ADRA1DP25100 572 aa18.37■□□□□ 0.53
PRPF19-201ENST00000227524 GCKP35557 465 aa18.37■□□□□ 0.53
PRPF19-201ENST00000227524 CCNHP51946 323 aaPredicted RBP18.37■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms