RNA–Protein interactions for RNA: ENST00000216774.10

SRP54-201, Transcript of signal recognition particle 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRP54, Length 2,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-201ENST00000216774 SOCS7O14512 581 aa14□□□□□ -0.17
SRP54-201ENST00000216774 ATP2A2P16615 1042 aaKnown RBP14□□□□□ -0.17
SRP54-201ENST00000216774 ARL4CP56559 192 aa14□□□□□ -0.17
SRP54-201ENST00000216774 SLC1A5Q15758 541 aa14□□□□□ -0.17
SRP54-201ENST00000216774 HP1BP3Q5SSJ5 553 aaPredicted RBP14□□□□□ -0.17
SRP54-201ENST00000216774 TXNRD3NBQ6F5E7 133 aa14□□□□□ -0.17
SRP54-201ENST00000216774 ATP11CQ8NB49 1132 aa14□□□□□ -0.17
SRP54-201ENST00000216774 ZNF398Q8TD17 642 aa14□□□□□ -0.17
SRP54-201ENST00000216774 UTP4Q969X6 686 aaKnown RBP14□□□□□ -0.17
SRP54-201ENST00000216774 MIEF2Q96C03 454 aa14□□□□□ -0.17
SRP54-201ENST00000216774 TEX13BQ9BXU2 312 aa14□□□□□ -0.17
SRP54-201ENST00000216774 AS3MTQ9HBK9 375 aa14□□□□□ -0.17
SRP54-201ENST00000216774 SLCO1B3Q9NPD5 702 aa14□□□□□ -0.17
SRP54-201ENST00000216774 DONSONQ9NYP3 566 aa14□□□□□ -0.17
SRP54-201ENST00000216774 RABGEF1Q9UJ41 708 aa14□□□□□ -0.17
SRP54-201ENST00000216774 CEP83Q9Y592 693 aa14□□□□□ -0.17
SRP54-201ENST00000216774 SNCAIPQ9Y6H5 919 aa14□□□□□ -0.17
SRP54-201ENST00000216774 MYH9P35579 1960 aaKnown RBP13.99□□□□□ -0.17
SRP54-201ENST00000216774 RLFQ13129 1914 aa13.99□□□□□ -0.17
SRP54-201ENST00000216774 SMAPO00193 183 aa13.99□□□□□ -0.17
SRP54-201ENST00000216774 HGSO14964 777 aaPredicted RBP13.99□□□□□ -0.17
SRP54-201ENST00000216774 ADCY3O60266 1144 aa13.99□□□□□ -0.17
SRP54-201ENST00000216774 IFNB1P01574 187 aa13.99□□□□□ -0.17
SRP54-201ENST00000216774 BRD2P25440 801 aaKnown RBP13.99□□□□□ -0.17
SRP54-201ENST00000216774 ICAM3P32942 547 aa13.99□□□□□ -0.17
SRP54-201ENST00000216774 RASSF2P50749 326 aa13.99□□□□□ -0.17
SRP54-201ENST00000216774 GPX6P59796 221 aa13.99□□□□□ -0.17
SRP54-201ENST00000216774 ZNF280AP59817 542 aaPredicted RBP13.99□□□□□ -0.17
SRP54-201ENST00000216774 SP2Q02086 613 aa13.99□□□□□ -0.17
SRP54-201ENST00000216774 SGSM1Q2NKQ1 1148 aa13.99□□□□□ -0.17
SRP54-201ENST00000216774 KLHL38Q2WGJ6 581 aa13.99□□□□□ -0.17
SRP54-201ENST00000216774 CIAPIN1Q6FI81 312 aa13.99□□□□□ -0.17
SRP54-201ENST00000216774 GPAT2Q6NUI2 795 aa13.99□□□□□ -0.17
SRP54-201ENST00000216774 ERICH1Q86X53 443 aa13.99□□□□□ -0.17
SRP54-201ENST00000216774 C10orf82Q8WW14 230 aa13.99□□□□□ -0.17
SRP54-201ENST00000216774 C12orf42Q96LP6 360 aa13.99□□□□□ -0.17
SRP54-201ENST00000216774 DHRS4Q9BTZ2 278 aa13.99□□□□□ -0.17
SRP54-201ENST00000216774 CYLDQ9NQC7 956 aa13.99□□□□□ -0.17
SRP54-201ENST00000216774 CISHQ9NSE2 258 aa13.99□□□□□ -0.17
SRP54-201ENST00000216774 COL11A1P12107 1806 aaPredicted RBP13.99□□□□□ -0.17
SRP54-201ENST00000216774 PHIPQ8WWQ0 1821 aa13.99□□□□□ -0.17
SRP54-201ENST00000216774 DOCK1Q14185 1865 aa13.99□□□□□ -0.17
SRP54-201ENST00000216774 CLUHO75153 1309 aa13.99□□□□□ -0.17
SRP54-201ENST00000216774 FAM189A1O60320 539 aa13.99□□□□□ -0.17
SRP54-201ENST00000216774 CST3P01034 146 aaPredicted RBP13.99□□□□□ -0.17
SRP54-201ENST00000216774 EDN1P05305 212 aa13.99□□□□□ -0.17
SRP54-201ENST00000216774 KRT7P08729 469 aa13.99□□□□□ -0.17
SRP54-201ENST00000216774 TSHRP16473 764 aa13.99□□□□□ -0.17
SRP54-201ENST00000216774 KRT4P19013 534 aa13.99□□□□□ -0.17
SRP54-201ENST00000216774 CTCFP49711 727 aaPredicted RBP13.99□□□□□ -0.17
SRP54-201ENST00000216774 TMEM132BQ14DG7 1078 aa13.99□□□□□ -0.17
SRP54-201ENST00000216774 SCYL3Q8IZE3 742 aa13.99□□□□□ -0.17
SRP54-201ENST00000216774 WDTC1Q8N5D0 677 aa13.99□□□□□ -0.17
SRP54-201ENST00000216774 ZNF280CQ8ND82 737 aa13.99□□□□□ -0.17
SRP54-201ENST00000216774 ZNF526Q8TF50 670 aaPredicted RBP13.99□□□□□ -0.17
SRP54-201ENST00000216774 PYROXD1Q8WU10 500 aa13.99□□□□□ -0.17
SRP54-201ENST00000216774 ZNF75CPQ92670 426 aaPredicted RBP13.99□□□□□ -0.17
SRP54-201ENST00000216774 HAUS1Q96CS2 278 aa13.99□□□□□ -0.17
SRP54-201ENST00000216774 THOC1Q96FV9 657 aaKnown RBP13.99□□□□□ -0.17
SRP54-201ENST00000216774 MAK16Q9BXY0 300 aaKnown RBP13.99□□□□□ -0.17
SRP54-201ENST00000216774 ACSS3Q9H6R3 686 aa13.99□□□□□ -0.17
SRP54-201ENST00000216774 ZMYND8Q9ULU4 1186 aaPredicted RBP13.99□□□□□ -0.17
SRP54-201ENST00000216774 AGTPBP1Q9UPW5 1226 aa13.99□□□□□ -0.17
SRP54-201ENST00000216774 IGKV6D-21A0A0A0MT36 114 aa13.98□□□□□ -0.17
SRP54-201ENST00000216774 A0A1W2PPM1 405 aa13.98□□□□□ -0.17
SRP54-201ENST00000216774 E7ESA3 106 aa13.98□□□□□ -0.17
SRP54-201ENST00000216774 TRAFD1O14545 582 aaPredicted RBP13.98□□□□□ -0.17
SRP54-201ENST00000216774 TM9SF1O15321 606 aa13.98□□□□□ -0.17
SRP54-201ENST00000216774 DIAPH2O60879 1101 aa13.98□□□□□ -0.17
SRP54-201ENST00000216774 EFNA5P52803 228 aa13.98□□□□□ -0.17
SRP54-201ENST00000216774 CAPSQ13938 189 aa13.98□□□□□ -0.17
SRP54-201ENST00000216774 TAZQ16635 292 aa13.98□□□□□ -0.17
SRP54-201ENST00000216774 SLC45A4Q5BKX6 768 aa13.98□□□□□ -0.17
SRP54-201ENST00000216774 FYB2Q5VWT5 728 aa13.98□□□□□ -0.17
SRP54-201ENST00000216774 LVRNQ6Q4G3 990 aa13.98□□□□□ -0.17
SRP54-201ENST00000216774 ADGRD1Q6QNK2 874 aa13.98□□□□□ -0.17
SRP54-201ENST00000216774 CAPN12Q6ZSI9 719 aa13.98□□□□□ -0.17
SRP54-201ENST00000216774 BBS12Q6ZW61 710 aa13.98□□□□□ -0.17
SRP54-201ENST00000216774 NAT8LQ8N9F0 302 aa13.98□□□□□ -0.17
SRP54-201ENST00000216774 FNIP1Q8TF40 1166 aa13.98□□□□□ -0.17
SRP54-201ENST00000216774 ALKBH8Q96BT7 664 aaKnown RBP13.98□□□□□ -0.17
SRP54-201ENST00000216774 C2CD2LO14523 706 aa13.98□□□□□ -0.17
SRP54-201ENST00000216774 HNRNPCL1O60812 293 aaKnown RBP13.98□□□□□ -0.17
SRP54-201ENST00000216774 TOM1L1O75674 476 aa13.98□□□□□ -0.17
SRP54-201ENST00000216774 TARSP26639 723 aaKnown RBP13.98□□□□□ -0.17
SRP54-201ENST00000216774 POLR2BP30876 1174 aaKnown RBP13.98□□□□□ -0.17
SRP54-201ENST00000216774 MYL6P60660 151 aa13.98□□□□□ -0.17
SRP54-201ENST00000216774 SLC25A11Q02978 314 aaKnown RBP13.98□□□□□ -0.17
SRP54-201ENST00000216774 SURF1Q15526 300 aa13.98□□□□□ -0.17
SRP54-201ENST00000216774 TARBP2Q15633 366 aaKnown RBP13.98□□□□□ -0.17
SRP54-201ENST00000216774 STXBP2Q15833 593 aa13.98□□□□□ -0.17
SRP54-201ENST00000216774 DUOXA2Q1HG44 320 aa13.98□□□□□ -0.17
SRP54-201ENST00000216774 DCAF15Q66K64 600 aa13.98□□□□□ -0.17
SRP54-201ENST00000216774 THNSL1Q8IYQ7 743 aa13.98□□□□□ -0.17
SRP54-201ENST00000216774 ACTL9Q8TC94 416 aa13.98□□□□□ -0.17
SRP54-201ENST00000216774 CPT1BQ92523 772 aa13.98□□□□□ -0.17
SRP54-201ENST00000216774 ACSF2Q96CM8 615 aaPredicted RBP13.98□□□□□ -0.17
SRP54-201ENST00000216774 MTMR12Q9C0I1 747 aa13.98□□□□□ -0.17
SRP54-201ENST00000216774 SLC5A4Q9NY91 659 aa13.98□□□□□ -0.17
SRP54-201ENST00000216774 RPL26L1Q9UNX3 145 aaKnown RBP13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms