RNA–Protein interactions for RNA: ENST00000035307.6

CHPF2-201, Transcript of chondroitin polymerizing factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHPF2, Length 3,978 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPF2-201ENST00000035307 NOL4O94818 638 aa12.68□□□□□ -0.38
CHPF2-201ENST00000035307 GBP1P32455 592 aa12.68□□□□□ -0.38
CHPF2-201ENST00000035307 COILP38432 576 aaPredicted RBP12.68□□□□□ -0.38
CHPF2-201ENST00000035307 CPT1AP50416 773 aa12.68□□□□□ -0.38
CHPF2-201ENST00000035307 ATP13A4Q4VNC1 1196 aa12.68□□□□□ -0.38
CHPF2-201ENST00000035307 JADE1Q6IE81 842 aa12.68□□□□□ -0.38
CHPF2-201ENST00000035307 BEST2Q8NFU1 509 aa12.68□□□□□ -0.38
CHPF2-201ENST00000035307 SREK1Q8WXA9 508 aaKnown RBP12.68□□□□□ -0.38
CHPF2-201ENST00000035307 RBM41Q96IZ5 413 aaKnown RBP12.68□□□□□ -0.38
CHPF2-201ENST00000035307 MBOAT7Q96N66 472 aa12.68□□□□□ -0.38
CHPF2-201ENST00000035307 DDX23Q9BUQ8 820 aaKnown RBP12.68□□□□□ -0.38
CHPF2-201ENST00000035307 EPN3Q9H201 632 aa12.68□□□□□ -0.38
CHPF2-201ENST00000035307 MAP2K7O14733 419 aa12.68□□□□□ -0.38
CHPF2-201ENST00000035307 SMIM10L2AP0DMW4 78 aa12.68□□□□□ -0.38
CHPF2-201ENST00000035307 SMIM10L2BP0DMW5 78 aa12.68□□□□□ -0.38
CHPF2-201ENST00000035307 PDGFRAP16234 1089 aa12.68□□□□□ -0.38
CHPF2-201ENST00000035307 ATP4AP20648 1035 aa12.68□□□□□ -0.38
CHPF2-201ENST00000035307 DHX34Q14147 1143 aaKnown RBP12.68□□□□□ -0.38
CHPF2-201ENST00000035307 CCDC14Q49A88 953 aa12.68□□□□□ -0.38
CHPF2-201ENST00000035307 NT5DC3Q86UY8 548 aa12.68□□□□□ -0.38
CHPF2-201ENST00000035307 EXOC8Q8IYI6 725 aa12.68□□□□□ -0.38
CHPF2-201ENST00000035307 ZFP42Q96MM3 310 aa12.68□□□□□ -0.38
CHPF2-201ENST00000035307 SBF2Q86WG5 1849 aa12.68□□□□□ -0.38
CHPF2-201ENST00000035307 TAF1LQ8IZX4 1826 aa12.68□□□□□ -0.38
CHPF2-201ENST00000035307 SYF2O95926 243 aaKnown RBP12.68□□□□□ -0.38
CHPF2-201ENST00000035307 MOCS2O96007 188 aaPredicted RBP12.68□□□□□ -0.38
CHPF2-201ENST00000035307 PSEN2P49810 448 aa12.68□□□□□ -0.38
CHPF2-201ENST00000035307 RABGGTBP53611 331 aa12.68□□□□□ -0.38
CHPF2-201ENST00000035307 IFI35P80217 286 aaPredicted RBP12.68□□□□□ -0.38
CHPF2-201ENST00000035307 GTF2BQ00403 316 aa12.68□□□□□ -0.38
CHPF2-201ENST00000035307 SP3Q02447 781 aa12.68□□□□□ -0.38
CHPF2-201ENST00000035307 CUL2Q13617 745 aa12.68□□□□□ -0.38
CHPF2-201ENST00000035307 FAM110CQ1W6H9 321 aa12.68□□□□□ -0.38
CHPF2-201ENST00000035307 NOL9Q5SY16 702 aaKnown RBP12.68□□□□□ -0.38
CHPF2-201ENST00000035307 CEP128Q6ZU80 1094 aa12.68□□□□□ -0.38
CHPF2-201ENST00000035307 RAPH1Q70E73 1250 aa12.68□□□□□ -0.38
CHPF2-201ENST00000035307 PCGF5Q86SE9 256 aa12.68□□□□□ -0.38
CHPF2-201ENST00000035307 ATL2Q8NHH9 583 aa12.68□□□□□ -0.38
CHPF2-201ENST00000035307 SH3TC2Q8TF17 1288 aa12.68□□□□□ -0.38
CHPF2-201ENST00000035307 GAD1Q99259 594 aa12.68□□□□□ -0.38
CHPF2-201ENST00000035307 VTA1Q9NP79 307 aa12.68□□□□□ -0.38
CHPF2-201ENST00000035307 CISHQ9NSE2 258 aa12.68□□□□□ -0.38
CHPF2-201ENST00000035307 PARVAQ9NVD7 372 aa12.68□□□□□ -0.38
CHPF2-201ENST00000035307 ARF4P18085 180 aaPredicted RBP12.67□□□□□ -0.38
CHPF2-201ENST00000035307 SESN2P58004 480 aaPredicted RBP12.67□□□□□ -0.38
CHPF2-201ENST00000035307 CDR2Q01850 454 aa12.67□□□□□ -0.38
CHPF2-201ENST00000035307 RWDD4Q6NW29 188 aaKnown RBP12.67□□□□□ -0.38
CHPF2-201ENST00000035307 CPNE8Q86YQ8 564 aa12.67□□□□□ -0.38
CHPF2-201ENST00000035307 SIK2Q9H0K1 926 aa12.67□□□□□ -0.38
CHPF2-201ENST00000035307 RNF208Q9H0X6 261 aa12.67□□□□□ -0.38
CHPF2-201ENST00000035307 NXF3Q9H4D5 531 aaKnown RBP12.67□□□□□ -0.38
CHPF2-201ENST00000035307 DPP3Q9NY33 737 aa12.67□□□□□ -0.38
CHPF2-201ENST00000035307 FAM53CQ9NYF3 392 aa12.67□□□□□ -0.38
CHPF2-201ENST00000035307 GABRQQ9UN88 632 aa12.67□□□□□ -0.38
CHPF2-201ENST00000035307 TMEM88BA6NKF7 163 aa12.67□□□□□ -0.38
CHPF2-201ENST00000035307 TULP2O00295 520 aa12.67□□□□□ -0.38
CHPF2-201ENST00000035307 FLT3P36888 993 aa12.67□□□□□ -0.38
CHPF2-201ENST00000035307 ARL4AP40617 200 aa12.67□□□□□ -0.38
CHPF2-201ENST00000035307 OR1G1P47890 313 aa12.67□□□□□ -0.38
CHPF2-201ENST00000035307 CCL23P55773 120 aa12.67□□□□□ -0.38
CHPF2-201ENST00000035307 EIF3EP60228 445 aaKnown RBP12.67□□□□□ -0.38
CHPF2-201ENST00000035307 PTGISQ16647 500 aa12.67□□□□□ -0.38
CHPF2-201ENST00000035307 TDRD10Q5VZ19 366 aaKnown RBP12.67□□□□□ -0.38
CHPF2-201ENST00000035307 HGSNATQ68CP4 663 aa12.67□□□□□ -0.38
CHPF2-201ENST00000035307 IRF2BP2Q7Z5L9 587 aa12.67□□□□□ -0.38
CHPF2-201ENST00000035307 SIX6OS1Q8N1H7 587 aa12.67□□□□□ -0.38
CHPF2-201ENST00000035307 NETO2Q8NC67 525 aa12.67□□□□□ -0.38
CHPF2-201ENST00000035307 PPFIBP2Q8ND30 876 aa12.67□□□□□ -0.38
CHPF2-201ENST00000035307 PPP1R36Q96LQ0 422 aa12.67□□□□□ -0.38
CHPF2-201ENST00000035307 TMEM121Q9BTD3 319 aa12.67□□□□□ -0.38
CHPF2-201ENST00000035307 KCND1Q9NSA2 647 aa12.67□□□□□ -0.38
CHPF2-201ENST00000035307 A0A1B0GUL6 1792 aa12.67□□□□□ -0.38
CHPF2-201ENST00000035307 LAMB2P55268 1798 aa12.67□□□□□ -0.38
CHPF2-201ENST00000035307 NDC80O14777 642 aa12.67□□□□□ -0.38
CHPF2-201ENST00000035307 MEFVO15553 781 aaPredicted RBP12.67□□□□□ -0.38
CHPF2-201ENST00000035307 CALB1P05937 261 aa12.67□□□□□ -0.38
CHPF2-201ENST00000035307 TBXAS1P24557 533 aaPredicted RBP12.67□□□□□ -0.38
CHPF2-201ENST00000035307 HOXD10P28358 340 aa12.67□□□□□ -0.38
CHPF2-201ENST00000035307 SDC4P31431 198 aa12.67□□□□□ -0.38
CHPF2-201ENST00000035307 ZCWPW2Q504Y3 356 aa12.67□□□□□ -0.38
CHPF2-201ENST00000035307 TTMPQ5BVD1 217 aa12.67□□□□□ -0.38
CHPF2-201ENST00000035307 CST9Q5W186 159 aa12.67□□□□□ -0.38
CHPF2-201ENST00000035307 XPO6Q96QU8 1125 aaKnown RBP12.67□□□□□ -0.38
CHPF2-201ENST00000035307 CYTH2Q99418 400 aa12.67□□□□□ -0.38
CHPF2-201ENST00000035307 CDT1Q9H211 546 aa12.67□□□□□ -0.38
CHPF2-201ENST00000035307 UVRAGQ9P2Y5 699 aa12.67□□□□□ -0.38
CHPF2-201ENST00000035307 IP6K2Q9UHH9 426 aa12.67□□□□□ -0.38
CHPF2-201ENST00000035307 GTF3C4Q9UKN8 822 aa12.67□□□□□ -0.38
CHPF2-201ENST00000035307 NEU2Q9Y3R4 380 aa12.67□□□□□ -0.38
CHPF2-201ENST00000035307 ZSCAN5DPP0CG00 497 aa12.66□□□□□ -0.38
CHPF2-201ENST00000035307 DNAJC3Q13217 504 aa12.66□□□□□ -0.38
CHPF2-201ENST00000035307 MYCBPAPQ8TBZ2 947 aa12.66□□□□□ -0.38
CHPF2-201ENST00000035307 ALG3Q92685 438 aa12.66□□□□□ -0.38
CHPF2-201ENST00000035307 C18orf25Q96B23 403 aaPredicted RBP12.66□□□□□ -0.38
CHPF2-201ENST00000035307 SMYD3Q9H7B4 428 aa12.66□□□□□ -0.38
CHPF2-201ENST00000035307 ETNK1Q9HBU6 452 aa12.66□□□□□ -0.38
CHPF2-201ENST00000035307 RAB6BQ9NRW1 208 aa12.66□□□□□ -0.38
CHPF2-201ENST00000035307 CHST7Q9NS84 486 aa12.66□□□□□ -0.38
CHPF2-201ENST00000035307 PIH1D1Q9NWS0 290 aaKnown RBP12.66□□□□□ -0.38
CHPF2-201ENST00000035307 NR2E1Q9Y466 385 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms