RNA–Protein interactions for RNA: ENST00000023939.8

RTFDC1-201, Transcript of Protein RTF2 homolog, humanhuman

TSL 2 BASIC

Gene RTFDC1, Length 1,745 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-201ENST00000023939 HSPA9P38646 679 aaKnown RBP15.13■□□□□ 0.01
RTFDC1-201ENST00000023939 OGDHQ02218 1023 aa15.13■□□□□ 0.01
RTFDC1-201ENST00000023939 MGAT3Q09327 533 aa15.13■□□□□ 0.01
RTFDC1-201ENST00000023939 TRIM32Q13049 653 aa15.13■□□□□ 0.01
RTFDC1-201ENST00000023939 PDCLQ13371 301 aa15.13■□□□□ 0.01
RTFDC1-201ENST00000023939 TRADDQ15628 312 aa15.13■□□□□ 0.01
RTFDC1-201ENST00000023939 ADAT2Q7Z6V5 191 aaKnown RBP15.13■□□□□ 0.01
RTFDC1-201ENST00000023939 XYLT1Q86Y38 959 aa15.13■□□□□ 0.01
RTFDC1-201ENST00000023939 JAMLQ86YT9 394 aa15.13■□□□□ 0.01
RTFDC1-201ENST00000023939 FAM71BQ8TC56 605 aa15.13■□□□□ 0.01
RTFDC1-201ENST00000023939 GDAP1L1Q96MZ0 367 aa15.13■□□□□ 0.01
RTFDC1-201ENST00000023939 RNF39Q9H2S5 420 aa15.13■□□□□ 0.01
RTFDC1-201ENST00000023939 HOMER3Q9NSC5 361 aa15.13■□□□□ 0.01
RTFDC1-201ENST00000023939 SNX9Q9Y5X1 595 aa15.13■□□□□ 0.01
RTFDC1-201ENST00000023939 M0QYV0 167 aa15.12■□□□□ 0.01
RTFDC1-201ENST00000023939 GJB6O95452 261 aa15.12■□□□□ 0.01
RTFDC1-201ENST00000023939 FAM153BP0C7A2 387 aa15.12■□□□□ 0.01
RTFDC1-201ENST00000023939 KRT3P12035 628 aa15.12■□□□□ 0.01
RTFDC1-201ENST00000023939 LRPAP1P30533 357 aa15.12■□□□□ 0.01
RTFDC1-201ENST00000023939 PTPN7P35236 360 aa15.12■□□□□ 0.01
RTFDC1-201ENST00000023939 PSMC1P62191 440 aaKnown RBP15.12■□□□□ 0.01
RTFDC1-201ENST00000023939 CAP1Q01518 475 aa15.12■□□□□ 0.01
RTFDC1-201ENST00000023939 KLF1Q13351 362 aaPredicted RBP15.12■□□□□ 0.01
RTFDC1-201ENST00000023939 ORC1Q13415 861 aa15.12■□□□□ 0.01
RTFDC1-201ENST00000023939 ACAP1Q15027 740 aa15.12■□□□□ 0.01
RTFDC1-201ENST00000023939 FAM153CQ494X1 144 aa15.12■□□□□ 0.01
RTFDC1-201ENST00000023939 PKDCCQ504Y2 493 aa15.12■□□□□ 0.01
RTFDC1-201ENST00000023939 HSP90B2PQ58FF3 399 aa15.12■□□□□ 0.01
RTFDC1-201ENST00000023939 GLRA4Q5JXX5 417 aa15.12■□□□□ 0.01
RTFDC1-201ENST00000023939 FBXO47Q5MNV8 452 aa15.12■□□□□ 0.01
RTFDC1-201ENST00000023939 CYP4A22Q5TCH4 519 aa15.12■□□□□ 0.01
RTFDC1-201ENST00000023939 MAP3K21Q5TCX8 1036 aa15.12■□□□□ 0.01
RTFDC1-201ENST00000023939 ARHGAP17Q68EM7 881 aa15.12■□□□□ 0.01
RTFDC1-201ENST00000023939 TTC27Q6P3X3 843 aa15.12■□□□□ 0.01
RTFDC1-201ENST00000023939 POLNQ7Z5Q5 900 aa15.12■□□□□ 0.01
RTFDC1-201ENST00000023939 RCOR2Q8IZ40 523 aa15.12■□□□□ 0.01
RTFDC1-201ENST00000023939 MRPL45Q9BRJ2 306 aaKnown RBP15.12■□□□□ 0.01
RTFDC1-201ENST00000023939 PARP2Q9UGN5 583 aa15.12■□□□□ 0.01
RTFDC1-201ENST00000023939 FAM153AQ9UHL3 310 aa15.12■□□□□ 0.01
RTFDC1-201ENST00000023939 DAPK3O43293 454 aa15.12■□□□□ 0.01
RTFDC1-201ENST00000023939 RPS6KA5O75582 802 aa15.12■□□□□ 0.01
RTFDC1-201ENST00000023939 TOMM70O94826 608 aa15.12■□□□□ 0.01
RTFDC1-201ENST00000023939 CHRNA1P02708 482 aa15.12■□□□□ 0.01
RTFDC1-201ENST00000023939 ERBB2P04626 1255 aa15.12■□□□□ 0.01
RTFDC1-201ENST00000023939 ASGR1P07306 291 aa15.12■□□□□ 0.01
RTFDC1-201ENST00000023939 PRKAR2AP13861 404 aaKnown RBP15.12■□□□□ 0.01
RTFDC1-201ENST00000023939 CETN2P41208 172 aa15.12■□□□□ 0.01
RTFDC1-201ENST00000023939 COPS2P61201 443 aa15.12■□□□□ 0.01
RTFDC1-201ENST00000023939 SOWAHAQ2M3V2 549 aa15.12■□□□□ 0.01
RTFDC1-201ENST00000023939 TWF2Q6IBS0 349 aaKnown RBP15.12■□□□□ 0.01
RTFDC1-201ENST00000023939 CCDC137Q6PK04 289 aaKnown RBP15.12■□□□□ 0.01
RTFDC1-201ENST00000023939 CRYBG2Q8N1P7 616 aa15.12■□□□□ 0.01
RTFDC1-201ENST00000023939 PCSK9Q8NBP7 692 aaKnown RBP15.12■□□□□ 0.01
RTFDC1-201ENST00000023939 STK32AQ8WU08 396 aa15.12■□□□□ 0.01
RTFDC1-201ENST00000023939 RBM41Q96IZ5 413 aaKnown RBP15.12■□□□□ 0.01
RTFDC1-201ENST00000023939 CAPNS2Q96L46 248 aa15.12■□□□□ 0.01
RTFDC1-201ENST00000023939 APOL6Q9BWW8 343 aa15.12■□□□□ 0.01
RTFDC1-201ENST00000023939 FAM129AQ9BZQ8 928 aa15.12■□□□□ 0.01
RTFDC1-201ENST00000023939 DNAI2Q9GZS0 605 aa15.12■□□□□ 0.01
RTFDC1-201ENST00000023939 PLEKHA4Q9H4M7 779 aa15.12■□□□□ 0.01
RTFDC1-201ENST00000023939 ST7Q9NRC1 585 aa15.12■□□□□ 0.01
RTFDC1-201ENST00000023939 RNF186Q9NXI6 227 aa15.12■□□□□ 0.01
RTFDC1-201ENST00000023939 DDX56Q9NY93 547 aaKnown RBP15.12■□□□□ 0.01
RTFDC1-201ENST00000023939 SRRDQ9UH36 339 aa15.12■□□□□ 0.01
RTFDC1-201ENST00000023939 TRIP11Q15643 1979 aa15.11■□□□□ 0.01
RTFDC1-201ENST00000023939 GOLGA6BA6NDN3 693 aa15.11■□□□□ 0.01
RTFDC1-201ENST00000023939 KPNA7A9QM74 516 aa15.11■□□□□ 0.01
RTFDC1-201ENST00000023939 AGPSO00116 658 aa15.11■□□□□ 0.01
RTFDC1-201ENST00000023939 CABYRO75952 493 aa15.11■□□□□ 0.01
RTFDC1-201ENST00000023939 PFKMP08237 780 aa15.11■□□□□ 0.01
RTFDC1-201ENST00000023939 HOXD10P28358 340 aa15.11■□□□□ 0.01
RTFDC1-201ENST00000023939 CCND3P30281 292 aaPredicted RBP15.11■□□□□ 0.01
RTFDC1-201ENST00000023939 RFC1P35251 1148 aaPredicted RBP15.11■□□□□ 0.01
RTFDC1-201ENST00000023939 TAF6P49848 677 aa15.11■□□□□ 0.01
RTFDC1-201ENST00000023939 HLTFQ14527 1009 aaKnown RBP eCLIP15.11■□□□□ 0.01
RTFDC1-201ENST00000023939 KCNA10Q16322 511 aa15.11■□□□□ 0.01
RTFDC1-201ENST00000023939 DEFB115Q30KQ5 88 aa15.11■□□□□ 0.01
RTFDC1-201ENST00000023939 SV2CQ496J9 727 aa15.11■□□□□ 0.01
RTFDC1-201ENST00000023939 SYDE1Q6ZW31 735 aaPredicted RBP15.11■□□□□ 0.01
RTFDC1-201ENST00000023939 DPH6Q7L8W6 267 aa15.11■□□□□ 0.01
RTFDC1-201ENST00000023939 HACE1Q8IYU2 909 aa15.11■□□□□ 0.01
RTFDC1-201ENST00000023939 IQCKQ8N0W5 287 aa15.11■□□□□ 0.01
RTFDC1-201ENST00000023939 TSEN2Q8NCE0 465 aaKnown RBP15.11■□□□□ 0.01
RTFDC1-201ENST00000023939 ARRDC4Q8NCT1 418 aa15.11■□□□□ 0.01
RTFDC1-201ENST00000023939 IPO4Q8TEX9 1081 aaKnown RBP15.11■□□□□ 0.01
RTFDC1-201ENST00000023939 WNT8BQ93098 351 aa15.11■□□□□ 0.01
RTFDC1-201ENST00000023939 LRRC45Q96CN5 670 aa15.11■□□□□ 0.01
RTFDC1-201ENST00000023939 PPP1R10Q96QC0 940 aaKnown RBP15.11■□□□□ 0.01
RTFDC1-201ENST00000023939 TRIM51Q9BSJ1 452 aa15.11■□□□□ 0.01
RTFDC1-201ENST00000023939 TRAIPQ9BWF2 469 aa15.11■□□□□ 0.01
RTFDC1-201ENST00000023939 KLK14Q9P0G3 267 aa15.11■□□□□ 0.01
RTFDC1-201ENST00000023939 TSPAN16Q9UKR8 245 aa15.11■□□□□ 0.01
RTFDC1-201ENST00000023939 ST3GAL5Q9UNP4 418 aa15.11■□□□□ 0.01
RTFDC1-201ENST00000023939 USTQ9Y2C2 406 aa15.11■□□□□ 0.01
RTFDC1-201ENST00000023939 SCN1AP35498 2009 aa15.1■□□□□ 0.01
RTFDC1-201ENST00000023939 F8VP50 259 aa15.1■□□□□ 0.01
RTFDC1-201ENST00000023939 GPR182O15218 404 aa15.1■□□□□ 0.01
RTFDC1-201ENST00000023939 AOC2O75106 756 aa15.1■□□□□ 0.01
RTFDC1-201ENST00000023939 SYF2O95926 243 aaKnown RBP15.1■□□□□ 0.01
RTFDC1-201ENST00000023939 SOX4Q06945 474 aaPredicted RBP15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms