RNA–Protein interactions for RNA: ENSMUST00000196220.4

Pdlim5-208, Transcript of PDZ and LIM domain protein 5, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Pdlim5, Length 1,725 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim5-208ENSMUST00000196220 Lonrf1D3YY23 762 aa14.03□□□□□ -0.16
Pdlim5-208ENSMUST00000196220 Farp1F8VPU2 1048 aa14.03□□□□□ -0.16
Pdlim5-208ENSMUST00000196220 Shoc2O88520 582 aaKnown RBP14.03□□□□□ -0.16
Pdlim5-208ENSMUST00000196220 AfpP02772 605 aa14.03□□□□□ -0.16
Pdlim5-208ENSMUST00000196220 RargP18911 458 aaKnown RBP14.03□□□□□ -0.16
Pdlim5-208ENSMUST00000196220 Usp10P52479 792 aaKnown RBP14.03□□□□□ -0.16
Pdlim5-208ENSMUST00000196220 InscQ3HNM7 579 aa14.03□□□□□ -0.16
Pdlim5-208ENSMUST00000196220 CblbQ3TTA7 982 aa14.03□□□□□ -0.16
Pdlim5-208ENSMUST00000196220 Dpysl3Q62188 570 aa14.03□□□□□ -0.16
Pdlim5-208ENSMUST00000196220 Tpd52Q62393 224 aa14.03□□□□□ -0.16
Pdlim5-208ENSMUST00000196220 Fcrl5Q68SN8 596 aa14.03□□□□□ -0.16
Pdlim5-208ENSMUST00000196220 Armcx2Q6A058 784 aaKnown RBP14.03□□□□□ -0.16
Pdlim5-208ENSMUST00000196220 Pi4kbQ8BKC8 816 aa14.03□□□□□ -0.16
Pdlim5-208ENSMUST00000196220 Anapc5Q8BTZ4 740 aa14.03□□□□□ -0.16
Pdlim5-208ENSMUST00000196220 Rsl1d1Q8BVY0 452 aaKnown RBP14.03□□□□□ -0.16
Pdlim5-208ENSMUST00000196220 YarsQ91WQ3 528 aaKnown RBP14.03□□□□□ -0.16
Pdlim5-208ENSMUST00000196220 Lztr1Q9CQ33 837 aa14.03□□□□□ -0.16
Pdlim5-208ENSMUST00000196220 Coro7Q9D2V7 922 aa14.03□□□□□ -0.16
Pdlim5-208ENSMUST00000196220 TtpalQ9D3D0 343 aa14.03□□□□□ -0.16
Pdlim5-208ENSMUST00000196220 Gtf2ird1Q9JI57 1104 aaKnown RBP14.03□□□□□ -0.16
Pdlim5-208ENSMUST00000196220 Trpm5Q9JJH7 1158 aa14.03□□□□□ -0.16
Pdlim5-208ENSMUST00000196220 Tk2Q9R088 270 aa14.03□□□□□ -0.16
Pdlim5-208ENSMUST00000196220 Nr1h3Q9Z0Y9 445 aa14.03□□□□□ -0.16
Pdlim5-208ENSMUST00000196220 Usp35M0QWN7 1009 aa14.02□□□□□ -0.16
Pdlim5-208ENSMUST00000196220 Clcn6O35454 870 aa14.02□□□□□ -0.16
Pdlim5-208ENSMUST00000196220 Aff1O88573 1216 aa14.02□□□□□ -0.16
Pdlim5-208ENSMUST00000196220 Gjb1P28230 283 aa14.02□□□□□ -0.16
Pdlim5-208ENSMUST00000196220 Rab20P35295 233 aa14.02□□□□□ -0.16
Pdlim5-208ENSMUST00000196220 Shox2P70390 331 aa14.02□□□□□ -0.16
Pdlim5-208ENSMUST00000196220 Zscan2Q07230 614 aa14.02□□□□□ -0.16
Pdlim5-208ENSMUST00000196220 Nlrc4Q3UP24 1024 aa14.02□□□□□ -0.16
Pdlim5-208ENSMUST00000196220 Vps41Q5KU39 853 aa14.02□□□□□ -0.16
Pdlim5-208ENSMUST00000196220 Mief2Q5NCS9 454 aa14.02□□□□□ -0.16
Pdlim5-208ENSMUST00000196220 Tcf4Q60722 670 aa14.02□□□□□ -0.16
Pdlim5-208ENSMUST00000196220 Wdr44Q6NVE8 915 aa14.02□□□□□ -0.16
Pdlim5-208ENSMUST00000196220 Ccdc117Q6PB51 277 aa14.02□□□□□ -0.16
Pdlim5-208ENSMUST00000196220 Igsf3Q6ZQA6 1194 aa14.02□□□□□ -0.16
Pdlim5-208ENSMUST00000196220 C2cd5Q7TPS5 1016 aaKnown RBP14.02□□□□□ -0.16
Pdlim5-208ENSMUST00000196220 Usp6nlQ80XC3 819 aa14.02□□□□□ -0.16
Pdlim5-208ENSMUST00000196220 Cwf19l2Q8BG79 887 aaKnown RBP14.02□□□□□ -0.16
Pdlim5-208ENSMUST00000196220 Rccd1Q8BTU7 377 aa14.02□□□□□ -0.16
Pdlim5-208ENSMUST00000196220 Ythdf3Q8BYK6 585 aaKnown RBP14.02□□□□□ -0.16
Pdlim5-208ENSMUST00000196220 Olfr393Q8VGR6 312 aa14.02□□□□□ -0.16
Pdlim5-208ENSMUST00000196220 GneQ91WG8 722 aaKnown RBP14.02□□□□□ -0.16
Pdlim5-208ENSMUST00000196220 Kdelr1Q99JH8 212 aa14.02□□□□□ -0.16
Pdlim5-208ENSMUST00000196220 Pcyox1Q9CQF9 505 aa14.02□□□□□ -0.16
Pdlim5-208ENSMUST00000196220 Rsph3bQ9DA80 389 aa14.02□□□□□ -0.16
Pdlim5-208ENSMUST00000196220 Tsc1Q9EP53 1161 aa14.02□□□□□ -0.16
Pdlim5-208ENSMUST00000196220 Prl2a1Q9JHK0 228 aa14.02□□□□□ -0.16
Pdlim5-208ENSMUST00000196220 Krt71Q9R0H5 524 aa14.02□□□□□ -0.16
Pdlim5-208ENSMUST00000196220 SktA2AQ25 1946 aaKnown RBP14.02□□□□□ -0.16
Pdlim5-208ENSMUST00000196220 Gm11985A0A1B0GS61 206 aa14.01□□□□□ -0.17
Pdlim5-208ENSMUST00000196220 Slc4a11A2AJN7 862 aa14.01□□□□□ -0.17
Pdlim5-208ENSMUST00000196220 Bfsp1A2AMT1 669 aa14.01□□□□□ -0.17
Pdlim5-208ENSMUST00000196220 Mocs3A2BDX3 460 aaKnown RBP14.01□□□□□ -0.17
Pdlim5-208ENSMUST00000196220 Gm16430A6X8J1 155 aa14.01□□□□□ -0.17
Pdlim5-208ENSMUST00000196220 Apol7bB1AQP7 369 aa14.01□□□□□ -0.17
Pdlim5-208ENSMUST00000196220 Ccdc170D3YXL0 722 aa14.01□□□□□ -0.17
Pdlim5-208ENSMUST00000196220 Slc4a9E9PUP3 929 aa14.01□□□□□ -0.17
Pdlim5-208ENSMUST00000196220 Gm5795E9PZN8 263 aa14.01□□□□□ -0.17
Pdlim5-208ENSMUST00000196220 Fignl2J3QK54 644 aa14.01□□□□□ -0.17
Pdlim5-208ENSMUST00000196220 P01650 108 aa14.01□□□□□ -0.17
Pdlim5-208ENSMUST00000196220 P01653 108 aa14.01□□□□□ -0.17
Pdlim5-208ENSMUST00000196220 Rbp3P49194 1234 aa14.01□□□□□ -0.17
Pdlim5-208ENSMUST00000196220 Nploc4P60670 608 aa14.01□□□□□ -0.17
Pdlim5-208ENSMUST00000196220 Pde1bQ01065 535 aa14.01□□□□□ -0.17
Pdlim5-208ENSMUST00000196220 Gbp8Q2V6D6 525 aa14.01□□□□□ -0.17
Pdlim5-208ENSMUST00000196220 Mphosph8Q3TYA6 858 aaKnown RBP14.01□□□□□ -0.17
Pdlim5-208ENSMUST00000196220 Apol7eQ3UZ24 369 aa14.01□□□□□ -0.17
Pdlim5-208ENSMUST00000196220 Snx25Q3ZT31 840 aa14.01□□□□□ -0.17
Pdlim5-208ENSMUST00000196220 Gm13103Q4VAD2 491 aa14.01□□□□□ -0.17
Pdlim5-208ENSMUST00000196220 Samhd1Q60710 627 aa14.01□□□□□ -0.17
Pdlim5-208ENSMUST00000196220 Acvrl1Q61288 502 aa14.01□□□□□ -0.17
Pdlim5-208ENSMUST00000196220 Plk4Q64702 925 aa14.01□□□□□ -0.17
Pdlim5-208ENSMUST00000196220 HpseQ6YGZ1 535 aa14.01□□□□□ -0.17
Pdlim5-208ENSMUST00000196220 Zdhhc17Q80TN5 632 aa14.01□□□□□ -0.17
Pdlim5-208ENSMUST00000196220 Vmn2r43Q80Z08 845 aa14.01□□□□□ -0.17
Pdlim5-208ENSMUST00000196220 Kctd15Q8K0E1 283 aa14.01□□□□□ -0.17
Pdlim5-208ENSMUST00000196220 Tdrd7Q8K1H1 1086 aaKnown RBP14.01□□□□□ -0.17
Pdlim5-208ENSMUST00000196220 OafQ8QZR4 282 aa14.01□□□□□ -0.17
Pdlim5-208ENSMUST00000196220 Haus3Q8QZX2 570 aa14.01□□□□□ -0.17
Pdlim5-208ENSMUST00000196220 Oit3Q8R4V5 546 aa14.01□□□□□ -0.17
Pdlim5-208ENSMUST00000196220 Slc35f6Q8VE96 372 aa14.01□□□□□ -0.17
Pdlim5-208ENSMUST00000196220 Olfr1502Q8VG66 316 aa14.01□□□□□ -0.17
Pdlim5-208ENSMUST00000196220 GzmnQ920S1 248 aa14.01□□□□□ -0.17
Pdlim5-208ENSMUST00000196220 Xpo6Q924Z6 1125 aa14.01□□□□□ -0.17
Pdlim5-208ENSMUST00000196220 Mcur1Q9CXD6 340 aa14.01□□□□□ -0.17
Pdlim5-208ENSMUST00000196220 Fam173bQ9D1Z3 247 aa14.01□□□□□ -0.17
Pdlim5-208ENSMUST00000196220 Slxl1Q9D515 155 aa14.01□□□□□ -0.17
Pdlim5-208ENSMUST00000196220 Ccdc124Q9D8X2 217 aaKnown RBP14.01□□□□□ -0.17
Pdlim5-208ENSMUST00000196220 Tmod3Q9JHJ0 352 aa14.01□□□□□ -0.17
Pdlim5-208ENSMUST00000196220 Msgn1Q9JK54 188 aa14.01□□□□□ -0.17
Pdlim5-208ENSMUST00000196220 Iigp1Q9QZ85 413 aa14.01□□□□□ -0.17
Pdlim5-208ENSMUST00000196220 Gm9774A0A0A6YVU8 407 aa14.01□□□□□ -0.17
Pdlim5-208ENSMUST00000196220 Gm6657A0A1B0GRJ3 277 aa14.01□□□□□ -0.17
Pdlim5-208ENSMUST00000196220 D3Z070 196 aa14.01□□□□□ -0.17
Pdlim5-208ENSMUST00000196220 Trim5E9PV98 497 aa14.01□□□□□ -0.17
Pdlim5-208ENSMUST00000196220 Gm3460E9QAI8 215 aa14.01□□□□□ -0.17
Pdlim5-208ENSMUST00000196220 Top6blJ3QMY9 579 aa14.01□□□□□ -0.17
Pdlim5-208ENSMUST00000196220 Kpna6O35345 536 aa14.01□□□□□ -0.17
Retrieved 100 of 22,080 RNA–protein pairs in 18.1 ms