RNA–Protein interactions for RNA: ENSMUST00000135636.5

Sort1-203, Transcript of Sortilin, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Sort1, Length 6,836 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sort1-203ENSMUST00000135636 Usp17ldG5E8G2 545 aa19.26■□□□□ 0.67
Sort1-203ENSMUST00000135636 Usp17lcG5E8I7 545 aa19.26■□□□□ 0.67
Sort1-203ENSMUST00000135636 Grap2O89100 322 aa19.26■□□□□ 0.67
Sort1-203ENSMUST00000135636 TfamP40630 243 aa19.26■□□□□ 0.67
Sort1-203ENSMUST00000135636 4933424G06RikA0A140LIP3 267 aa19.26■□□□□ 0.67
Sort1-203ENSMUST00000135636 Rdh7O88451 316 aa19.26■□□□□ 0.67
Sort1-203ENSMUST00000135636 Zfy1P10925 782 aa19.26■□□□□ 0.67
Sort1-203ENSMUST00000135636 Scaf1Q5U4C3 1256 aaKnown RBP19.26■□□□□ 0.67
Sort1-203ENSMUST00000135636 Tas2r134Q7TQB0 298 aa19.26■□□□□ 0.67
Sort1-203ENSMUST00000135636 Ccdc137Q8R0K4 290 aaKnown RBP19.26■□□□□ 0.67
Sort1-203ENSMUST00000135636 Rxfp2Q91ZZ5 737 aa19.26■□□□□ 0.67
Sort1-203ENSMUST00000135636 Vta1Q9CR26 309 aa19.26■□□□□ 0.67
Sort1-203ENSMUST00000135636 MispQ9D279 648 aa19.26■□□□□ 0.67
Sort1-203ENSMUST00000135636 Tnfrsf25B1AWN9 411 aa19.26■□□□□ 0.67
Sort1-203ENSMUST00000135636 Bnc1O35914 961 aa19.26■□□□□ 0.67
Sort1-203ENSMUST00000135636 Grm6Q5NCH9 871 aa19.26■□□□□ 0.67
Sort1-203ENSMUST00000135636 Rgs3Q9DC04 966 aa19.26■□□□□ 0.67
Sort1-203ENSMUST00000135636 RhoaQ9QUI0 193 aa19.26■□□□□ 0.67
Sort1-203ENSMUST00000135636 CtsfQ9R013 462 aa19.26■□□□□ 0.67
Sort1-203ENSMUST00000135636 Vstm4T1NXB5 319 aa19.26■□□□□ 0.67
Sort1-203ENSMUST00000135636 Ighv11-1A0A075B5R6 117 aa19.26■□□□□ 0.67
Sort1-203ENSMUST00000135636 Serpina3cP29621 417 aa19.26■□□□□ 0.67
Sort1-203ENSMUST00000135636 Gemin4Q6P6L6 1058 aaKnown RBP19.26■□□□□ 0.67
Sort1-203ENSMUST00000135636 Zmynd10Q99ML0 440 aa19.26■□□□□ 0.67
Sort1-203ENSMUST00000135636 Extl2Q9ES89 330 aa19.26■□□□□ 0.67
Sort1-203ENSMUST00000135636 Sgpp1Q9JI99 430 aa19.26■□□□□ 0.67
Sort1-203ENSMUST00000135636 Ugt1a8D3Z748 530 aa19.25■□□□□ 0.67
Sort1-203ENSMUST00000135636 Ugt1a10E9PXN7 530 aa19.25■□□□□ 0.67
Sort1-203ENSMUST00000135636 PkmP52480 531 aaKnown RBP19.25■□□□□ 0.67
Sort1-203ENSMUST00000135636 Ugt1a2P70691 533 aa19.25■□□□□ 0.67
Sort1-203ENSMUST00000135636 Ugt1a9Q62452 528 aa19.25■□□□□ 0.67
Sort1-203ENSMUST00000135636 Ugt1a1Q63886 535 aa19.25■□□□□ 0.67
Sort1-203ENSMUST00000135636 Nlrp9cQ66X01 1004 aa19.25■□□□□ 0.67
Sort1-203ENSMUST00000135636 Egfl8Q6GUQ1 293 aa19.25■□□□□ 0.67
Sort1-203ENSMUST00000135636 Ggnbp1Q6K1E7 370 aa19.25■□□□□ 0.67
Sort1-203ENSMUST00000135636 Stau2Q8CJ67 570 aaKnown RBP19.25■□□□□ 0.67
Sort1-203ENSMUST00000135636 Zfp566Q8VCI1 386 aa19.25■□□□□ 0.67
Sort1-203ENSMUST00000135636 Olfr30Q8VGD8 315 aa19.25■□□□□ 0.67
Sort1-203ENSMUST00000135636 Tlr6Q9EPW9 795 aa19.25■□□□□ 0.67
Sort1-203ENSMUST00000135636 Tulp4Q9JIL5 1547 aa19.25■□□□□ 0.67
Sort1-203ENSMUST00000135636 RaraP11416 462 aa19.25■□□□□ 0.67
Sort1-203ENSMUST00000135636 Ephb3P54754 993 aaKnown RBP19.25■□□□□ 0.67
Sort1-203ENSMUST00000135636 Lzts1P60853 599 aa19.25■□□□□ 0.67
Sort1-203ENSMUST00000135636 IdsQ08890 552 aa19.25■□□□□ 0.67
Sort1-203ENSMUST00000135636 Nlrp4aQ8BU40 982 aa19.25■□□□□ 0.67
Sort1-203ENSMUST00000135636 Sgf29Q9DA08 293 aaKnown RBP19.25■□□□□ 0.67
Sort1-203ENSMUST00000135636 Cyp2j6O54750 501 aa19.25■□□□□ 0.67
Sort1-203ENSMUST00000135636 YdjcQ14BV6 310 aa19.25■□□□□ 0.67
Sort1-203ENSMUST00000135636 Pik3r5Q5SW28 871 aa19.25■□□□□ 0.67
Sort1-203ENSMUST00000135636 C130060K24RikG3UWA8 416 aa19.25■□□□□ 0.67
Sort1-203ENSMUST00000135636 Fkbp1aP26883 108 aaKnown RBP19.25■□□□□ 0.67
Sort1-203ENSMUST00000135636 Hist2h2acQ64523 129 aa19.25■□□□□ 0.67
Sort1-203ENSMUST00000135636 Hist2h2aa1Q6GSS7 130 aaKnown RBP19.25■□□□□ 0.67
Sort1-203ENSMUST00000135636 L3mbtl3Q8BLB7 883 aa19.25■□□□□ 0.67
Sort1-203ENSMUST00000135636 Abcf2Q99LE6 628 aaKnown RBP19.25■□□□□ 0.67
Sort1-203ENSMUST00000135636 Cndp2Q9D1A2 475 aaKnown RBP19.25■□□□□ 0.67
Sort1-203ENSMUST00000135636 Ndufs3Q9DCT2 263 aaKnown RBP19.25■□□□□ 0.67
Sort1-203ENSMUST00000135636 Gm6882J3KMT3 313 aa19.25■□□□□ 0.67
Sort1-203ENSMUST00000135636 Atp6v1b2P62814 511 aa19.25■□□□□ 0.67
Sort1-203ENSMUST00000135636 Cct7P80313 544 aa19.25■□□□□ 0.67
Sort1-203ENSMUST00000135636 Gm10662Q3UT86 313 aa19.25■□□□□ 0.67
Sort1-203ENSMUST00000135636 Ppp4r3cQ3V0Y1 813 aa19.25■□□□□ 0.67
Sort1-203ENSMUST00000135636 Tfdp2Q64163 446 aa19.25■□□□□ 0.67
Sort1-203ENSMUST00000135636 Snx14Q8BHY8 964 aa19.25■□□□□ 0.67
Sort1-203ENSMUST00000135636 Det1Q9D0A0 550 aa19.25■□□□□ 0.67
Sort1-203ENSMUST00000135636 Sept12Q9D451 317 aa19.25■□□□□ 0.67
Sort1-203ENSMUST00000135636 Zcchc17Q9ESX4 241 aaKnown RBP19.25■□□□□ 0.67
Sort1-203ENSMUST00000135636 Zmym2Q9CU65 1376 aa19.25■□□□□ 0.67
Sort1-203ENSMUST00000135636 PdgfraP26618 1089 aa19.25■□□□□ 0.67
Sort1-203ENSMUST00000135636 CebpaP53566 359 aa19.25■□□□□ 0.67
Sort1-203ENSMUST00000135636 CpQ61147 1061 aa19.25■□□□□ 0.67
Sort1-203ENSMUST00000135636 Qsox1Q8BND5 748 aa19.25■□□□□ 0.67
Sort1-203ENSMUST00000135636 Dctpp1Q9QY93 170 aa19.25■□□□□ 0.67
Sort1-203ENSMUST00000135636 Dctn3Q9Z0Y1 186 aa19.25■□□□□ 0.67
Sort1-203ENSMUST00000135636 DtnbO70585 659 aa19.24■□□□□ 0.67
Sort1-203ENSMUST00000135636 Rad54lP70270 747 aa19.24■□□□□ 0.67
Sort1-203ENSMUST00000135636 Itga7Q61738 1179 aa19.24■□□□□ 0.67
Sort1-203ENSMUST00000135636 Mup6A2AV72 179 aa19.24■□□□□ 0.67
Sort1-203ENSMUST00000135636 Zscan4dA7KBS4 506 aa19.24■□□□□ 0.67
Sort1-203ENSMUST00000135636 Acot1O55137 419 aa19.24■□□□□ 0.67
Sort1-203ENSMUST00000135636 Cdc25aP48964 514 aa19.24■□□□□ 0.67
Sort1-203ENSMUST00000135636 Frmd8Q3UFK8 466 aa19.24■□□□□ 0.67
Sort1-203ENSMUST00000135636 Zscan4fQ3URS2 506 aa19.24■□□□□ 0.67
Sort1-203ENSMUST00000135636 Zscan4cQ80VJ6 506 aa19.24■□□□□ 0.67
Sort1-203ENSMUST00000135636 SucoQ8C341 1250 aa19.24■□□□□ 0.67
Sort1-203ENSMUST00000135636 Slc13a3Q91Y63 600 aa19.24■□□□□ 0.67
Sort1-203ENSMUST00000135636 AasdhpptQ9CQF6 309 aa19.24■□□□□ 0.67
Sort1-203ENSMUST00000135636 Pld1Q9Z280 1074 aa19.24■□□□□ 0.67
Sort1-203ENSMUST00000135636 Olfr726E9Q8X3 321 aa19.24■□□□□ 0.67
Sort1-203ENSMUST00000135636 Adcy1O88444 1118 aa19.24■□□□□ 0.67
Sort1-203ENSMUST00000135636 Olfr725Q05A45 321 aa19.24■□□□□ 0.67
Sort1-203ENSMUST00000135636 Trmt10aQ8C1Z8 328 aaKnown RBP19.24■□□□□ 0.67
Sort1-203ENSMUST00000135636 Cdk9Q99J95 372 aa19.24■□□□□ 0.67
Sort1-203ENSMUST00000135636 Rin2Q9D684 903 aa19.24■□□□□ 0.67
Sort1-203ENSMUST00000135636 Dot1lQ6XZL8 1540 aa19.24■□□□□ 0.67
Sort1-203ENSMUST00000135636 Gm8926L7MUE8 181 aa19.24■□□□□ 0.67
Sort1-203ENSMUST00000135636 Ephb4P54761 987 aa19.24■□□□□ 0.67
Sort1-203ENSMUST00000135636 Usp13Q5BKP2 858 aa19.24■□□□□ 0.67
Sort1-203ENSMUST00000135636 Zc3h11aQ6NZF1 792 aaKnown RBP19.24■□□□□ 0.67
Sort1-203ENSMUST00000135636 Maml1Q6T264 1020 aa19.24■□□□□ 0.67
Retrieved 100 of 22,080 RNA–protein pairs in 18.5 ms