RNA–Protein interactions for RNA: ENSMUST00000119954.8

Pcf11-201, Transcript of Cleavage and polyadenylation factor subunit homolog (S. cerevisiae), mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcf11, Length 5,995 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcf11-201ENSMUST00000119954 Pcdhga4Q91XY4 930 aa18.24■□□□□ 0.51
Pcf11-201ENSMUST00000119954 WapP01173 134 aa18.24■□□□□ 0.51
Pcf11-201ENSMUST00000119954 HdcP23738 662 aa18.24■□□□□ 0.51
Pcf11-201ENSMUST00000119954 Mxi1P50540 228 aa18.24■□□□□ 0.51
Pcf11-201ENSMUST00000119954 Klhdc10Q6PAR0 439 aa18.24■□□□□ 0.51
Pcf11-201ENSMUST00000119954 RgmbQ7TQ33 436 aa18.24■□□□□ 0.51
Pcf11-201ENSMUST00000119954 Tspan9Q8BJU2 239 aa18.24■□□□□ 0.51
Pcf11-201ENSMUST00000119954 Ttc23Q8CHY7 488 aa18.24■□□□□ 0.51
Pcf11-201ENSMUST00000119954 Armcx6Q8K3A6 301 aa18.24■□□□□ 0.51
Pcf11-201ENSMUST00000119954 Glra3Q91XP5 464 aa18.24■□□□□ 0.51
Pcf11-201ENSMUST00000119954 Golph3Q9CRA5 298 aa18.24■□□□□ 0.51
Pcf11-201ENSMUST00000119954 Thg1lQ9CY52 298 aa18.24■□□□□ 0.51
Pcf11-201ENSMUST00000119954 Lrrc71Q9D3W5 558 aa18.24■□□□□ 0.51
Pcf11-201ENSMUST00000119954 LrmdaQ9D9B4 229 aa18.24■□□□□ 0.51
Pcf11-201ENSMUST00000119954 Tlr9Q9EQU3 1032 aa18.24■□□□□ 0.51
Pcf11-201ENSMUST00000119954 Sgpp1Q9JI99 430 aa18.24■□□□□ 0.51
Pcf11-201ENSMUST00000119954 Krt28A6BLY7 462 aa18.24■□□□□ 0.51
Pcf11-201ENSMUST00000119954 Ccndbp1Q3TVC7 356 aa18.24■□□□□ 0.51
Pcf11-201ENSMUST00000119954 Nudt18Q3U2V3 323 aa18.24■□□□□ 0.51
Pcf11-201ENSMUST00000119954 Suz12Q80U70 741 aaKnown RBP18.24■□□□□ 0.51
Pcf11-201ENSMUST00000119954 Smndc1Q8BGT7 238 aaKnown RBP18.24■□□□□ 0.51
Pcf11-201ENSMUST00000119954 Efl1Q8C0D5 1127 aa18.24■□□□□ 0.51
Pcf11-201ENSMUST00000119954 Fam118bQ8C569 351 aa18.24■□□□□ 0.51
Pcf11-201ENSMUST00000119954 Idh3bQ91VA7 384 aa18.24■□□□□ 0.51
Pcf11-201ENSMUST00000119954 Tex44Q9DA60 530 aa18.24■□□□□ 0.51
Pcf11-201ENSMUST00000119954 Thap11Q9JJD0 305 aa18.24■□□□□ 0.51
Pcf11-201ENSMUST00000119954 Prg3Q9JL95 222 aa18.24■□□□□ 0.51
Pcf11-201ENSMUST00000119954 Rasgrp2Q9QUG9 608 aa18.24■□□□□ 0.51
Pcf11-201ENSMUST00000119954 C87977A2A958 498 aa18.23■□□□□ 0.51
Pcf11-201ENSMUST00000119954 Nmt1O70310 496 aaKnown RBP18.23■□□□□ 0.51
Pcf11-201ENSMUST00000119954 Otop3Q80UF9 577 aa18.23■□□□□ 0.51
Pcf11-201ENSMUST00000119954 Slitrk2Q810C0 846 aa18.23■□□□□ 0.51
Pcf11-201ENSMUST00000119954 Kbtbd13Q8C828 458 aa18.23■□□□□ 0.51
Pcf11-201ENSMUST00000119954 Fcho1Q8K285 873 aa18.23■□□□□ 0.51
Pcf11-201ENSMUST00000119954 Trpv2Q9WTR1 756 aa18.23■□□□□ 0.51
Pcf11-201ENSMUST00000119954 M1apQ9Z0E1 529 aa18.23■□□□□ 0.51
Pcf11-201ENSMUST00000119954 Gm17093F6XGJ4 214 aa18.23■□□□□ 0.51
Pcf11-201ENSMUST00000119954 Vmn1r209Q5NC97 312 aa18.23■□□□□ 0.51
Pcf11-201ENSMUST00000119954 Znf513Q6PD29 541 aa18.23■□□□□ 0.51
Pcf11-201ENSMUST00000119954 Olfr297Q7TS07 310 aa18.23■□□□□ 0.51
Pcf11-201ENSMUST00000119954 Dgcr8Q9EQM6 773 aa18.23■□□□□ 0.51
Pcf11-201ENSMUST00000119954 Gabbr1Q9WV18 960 aa18.23■□□□□ 0.51
Pcf11-201ENSMUST00000119954 PtproE9Q612 1226 aa18.23■□□□□ 0.51
Pcf11-201ENSMUST00000119954 Klf6O08584 283 aa18.23■□□□□ 0.51
Pcf11-201ENSMUST00000119954 Pdk1Q8BFP9 434 aaKnown RBP18.23■□□□□ 0.51
Pcf11-201ENSMUST00000119954 Sh3bp5lQ99LH9 392 aa18.23■□□□□ 0.51
Pcf11-201ENSMUST00000119954 Pde1aQ61481 565 aa18.23■□□□□ 0.51
Pcf11-201ENSMUST00000119954 Olfr832Q7TRG9 312 aa18.23■□□□□ 0.51
Pcf11-201ENSMUST00000119954 Ppm1nQ8BGL1 404 aa18.23■□□□□ 0.51
Pcf11-201ENSMUST00000119954 Hat1Q8BY71 416 aa18.23■□□□□ 0.51
Pcf11-201ENSMUST00000119954 Pak5Q8C015 719 aa18.23■□□□□ 0.51
Pcf11-201ENSMUST00000119954 Scgb2b20Q9JI02 112 aa18.23■□□□□ 0.51
Pcf11-201ENSMUST00000119954 Rnf25Q9QZR0 456 aa18.23■□□□□ 0.51
Pcf11-201ENSMUST00000119954 Phf2Q9WTU0 1096 aa18.23■□□□□ 0.51
Pcf11-201ENSMUST00000119954 Kdm5cP41230 1554 aa18.23■□□□□ 0.51
Pcf11-201ENSMUST00000119954 Gm4952Q5FW57 296 aa18.23■□□□□ 0.51
Pcf11-201ENSMUST00000119954 Ddx3xQ62167 662 aaKnown RBP18.23■□□□□ 0.51
Pcf11-201ENSMUST00000119954 RbakQ8BQC8 711 aa18.23■□□□□ 0.51
Pcf11-201ENSMUST00000119954 Eif2b2Q99LD9 351 aa18.23■□□□□ 0.51
Pcf11-201ENSMUST00000119954 Nkd1Q99MH6 471 aa18.23■□□□□ 0.51
Pcf11-201ENSMUST00000119954 H2afxP27661 143 aaKnown RBP18.22■□□□□ 0.51
Pcf11-201ENSMUST00000119954 Ankrd27Q3UMR0 1048 aa18.22■□□□□ 0.51
Pcf11-201ENSMUST00000119954 Tssk1bQ61241 365 aa18.22■□□□□ 0.51
Pcf11-201ENSMUST00000119954 Eif3lQ8QZY1 564 aaKnown RBP18.22■□□□□ 0.51
Pcf11-201ENSMUST00000119954 Serpina3nQ91WP6 418 aa18.22■□□□□ 0.51
Pcf11-201ENSMUST00000119954 Jph2Q9ET78 696 aa18.22■□□□□ 0.51
Pcf11-201ENSMUST00000119954 Wdr12Q9JJA4 423 aa18.22■□□□□ 0.51
Pcf11-201ENSMUST00000119954 Cfap74Q3UY96 1578 aa18.22■□□□□ 0.51
Pcf11-201ENSMUST00000119954 Nos1Q9Z0J4 1429 aa18.22■□□□□ 0.51
Pcf11-201ENSMUST00000119954 Zfp277E9Q6D6 583 aaKnown RBP18.22■□□□□ 0.51
Pcf11-201ENSMUST00000119954 Ccdc69Q3TCJ8 202 aa18.22■□□□□ 0.51
Pcf11-201ENSMUST00000119954 Epha7Q61772 998 aa18.22■□□□□ 0.51
Pcf11-201ENSMUST00000119954 E2f7Q6S7F2 904 aa18.22■□□□□ 0.51
Pcf11-201ENSMUST00000119954 TbataQ7TSD4 393 aa18.22■□□□□ 0.51
Pcf11-201ENSMUST00000119954 CherpQ8CGZ0 936 aaKnown RBP18.22■□□□□ 0.51
Pcf11-201ENSMUST00000119954 Nxnl1Q8VC33 217 aa18.22■□□□□ 0.51
Pcf11-201ENSMUST00000119954 Pcdha5Q91Y15 934 aa18.22■□□□□ 0.51
Pcf11-201ENSMUST00000119954 Orc6Q9WUJ8 262 aa18.22■□□□□ 0.51
Pcf11-201ENSMUST00000119954 Kdm3bQ6ZPY7 1562 aa18.22■□□□□ 0.51
Pcf11-201ENSMUST00000119954 L1camP11627 1260 aa18.22■□□□□ 0.51
Pcf11-201ENSMUST00000119954 Phka2Q8BWJ3 1235 aa18.22■□□□□ 0.51
Pcf11-201ENSMUST00000119954 Zhx3Q8C0Q2 951 aa18.22■□□□□ 0.51
Pcf11-201ENSMUST00000119954 Slc9b1Q8C0X2 565 aa18.22■□□□□ 0.51
Pcf11-201ENSMUST00000119954 DpydQ8CHR6 1025 aa18.22■□□□□ 0.51
Pcf11-201ENSMUST00000119954 GaleQ8R059 347 aa18.22■□□□□ 0.51
Pcf11-201ENSMUST00000119954 Kif1cO35071 1100 aaKnown RBP18.22■□□□□ 0.51
Pcf11-201ENSMUST00000119954 S100a13P97352 98 aa18.22■□□□□ 0.51
Pcf11-201ENSMUST00000119954 Usp39Q3TIX9 564 aa18.22■□□□□ 0.51
Pcf11-201ENSMUST00000119954 Mks1Q5SW45 561 aa18.22■□□□□ 0.51
Pcf11-201ENSMUST00000119954 Vmn2r87E9PZX4 848 aa18.21■□□□□ 0.51
Pcf11-201ENSMUST00000119954 Ccng2O08918 344 aa18.21■□□□□ 0.51
Pcf11-201ENSMUST00000119954 CrymO54983 313 aa18.21■□□□□ 0.51
Pcf11-201ENSMUST00000119954 CidebO70303 219 aa18.21■□□□□ 0.51
Pcf11-201ENSMUST00000119954 Nmt2O70311 529 aa18.21■□□□□ 0.51
Pcf11-201ENSMUST00000119954 AurkcO88445 282 aa18.21■□□□□ 0.51
Pcf11-201ENSMUST00000119954 Clec4fP70194 548 aa18.21■□□□□ 0.51
Pcf11-201ENSMUST00000119954 Taf6lQ8R2K4 616 aa18.21■□□□□ 0.51
Pcf11-201ENSMUST00000119954 Smok2bQ9QYZ3 484 aa18.21■□□□□ 0.51
Pcf11-201ENSMUST00000119954 Smok2aQ9QYZ6 504 aa18.21■□□□□ 0.51
Pcf11-201ENSMUST00000119954 Dlc1Q9R0Z9 1092 aa18.21■□□□□ 0.51
Retrieved 100 of 22,080 RNA–protein pairs in 23.9 ms