RNA–Protein interactions for RNA: ENSMUST00000038514.14

Nup54-201, Transcript of Nuclear pore complex protein Nup54, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Nup54, Length 2,352 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup54-201ENSMUST00000038514 Adamts18Q4VC17 1219 aa15.73■□□□□ 0.11
Nup54-201ENSMUST00000038514 Trim24Q64127 1051 aaKnown RBP15.73■□□□□ 0.11
Nup54-201ENSMUST00000038514 OcrlQ6NVF0 900 aa15.73■□□□□ 0.11
Nup54-201ENSMUST00000038514 Psd2Q6P1I6 770 aa15.73■□□□□ 0.11
Nup54-201ENSMUST00000038514 Gm2163Q6PCY5 473 aa15.73■□□□□ 0.11
Nup54-201ENSMUST00000038514 Mapk15Q80Y86 549 aa15.73■□□□□ 0.11
Nup54-201ENSMUST00000038514 Rbm12b1Q80YR9 836 aaKnown RBP15.73■□□□□ 0.11
Nup54-201ENSMUST00000038514 Ldlrap1Q8C142 308 aa15.73■□□□□ 0.11
Nup54-201ENSMUST00000038514 Gtpbp10Q8K013 366 aa15.73■□□□□ 0.11
Nup54-201ENSMUST00000038514 Adi1Q99JT9 179 aa15.73■□□□□ 0.11
Nup54-201ENSMUST00000038514 Q9D2Q3 444 aa15.73■□□□□ 0.11
Nup54-201ENSMUST00000038514 Ropn1Q9ESG2 212 aa15.73■□□□□ 0.11
Nup54-201ENSMUST00000038514 Hes6Q9JHE6 224 aa15.73■□□□□ 0.11
Nup54-201ENSMUST00000038514 Tk2Q9R088 270 aa15.73■□□□□ 0.11
Nup54-201ENSMUST00000038514 Col4a3Q9QZS0 1669 aa15.72■□□□□ 0.11
Nup54-201ENSMUST00000038514 Siah3B2RWG3 268 aa15.72■□□□□ 0.11
Nup54-201ENSMUST00000038514 VdrP48281 422 aa15.72■□□□□ 0.11
Nup54-201ENSMUST00000038514 HpdP49429 393 aa15.72■□□□□ 0.11
Nup54-201ENSMUST00000038514 NcstnP57716 708 aa15.72■□□□□ 0.11
Nup54-201ENSMUST00000038514 Spa17Q62252 149 aa15.72■□□□□ 0.11
Nup54-201ENSMUST00000038514 Nuak1Q641K5 658 aa15.72■□□□□ 0.11
Nup54-201ENSMUST00000038514 Lrif1Q8CDD9 755 aa15.72■□□□□ 0.11
Nup54-201ENSMUST00000038514 Sugp2Q8CH09 1067 aa15.72■□□□□ 0.11
Nup54-201ENSMUST00000038514 Dicer1Q8R418 1916 aa15.72■□□□□ 0.11
Nup54-201ENSMUST00000038514 Ccdc13D3YV10 709 aa15.72■□□□□ 0.11
Nup54-201ENSMUST00000038514 Dnase1l3O55070 310 aa15.72■□□□□ 0.11
Nup54-201ENSMUST00000038514 Magea6O89010 325 aa15.72■□□□□ 0.11
Nup54-201ENSMUST00000038514 Pms2P54279 859 aa15.72■□□□□ 0.11
Nup54-201ENSMUST00000038514 Sem1P60897 70 aa15.72■□□□□ 0.11
Nup54-201ENSMUST00000038514 InscQ3HNM7 579 aa15.72■□□□□ 0.11
Nup54-201ENSMUST00000038514 Rcsd1Q3UZA1 412 aa15.72■□□□□ 0.11
Nup54-201ENSMUST00000038514 Pik3r5Q5SW28 871 aa15.72■□□□□ 0.11
Nup54-201ENSMUST00000038514 Arhgap18Q8K0Q5 663 aa15.72■□□□□ 0.11
Nup54-201ENSMUST00000038514 Vps37bQ8R0J7 285 aa15.72■□□□□ 0.11
Nup54-201ENSMUST00000038514 Sun1Q9D666 913 aaKnown RBP15.72■□□□□ 0.11
Nup54-201ENSMUST00000038514 IydQ9DCX8 285 aa15.72■□□□□ 0.11
Nup54-201ENSMUST00000038514 Gadd45gQ9Z111 159 aa15.72■□□□□ 0.11
Nup54-201ENSMUST00000038514 SfnO70456 248 aaKnown RBP15.71■□□□□ 0.11
Nup54-201ENSMUST00000038514 Srpk1O70551 648 aaKnown RBP15.71■□□□□ 0.11
Nup54-201ENSMUST00000038514 AmhP27106 555 aa15.71■□□□□ 0.11
Nup54-201ENSMUST00000038514 Bace1P56818 501 aa15.71■□□□□ 0.11
Nup54-201ENSMUST00000038514 Kmt5aQ2YDW7 349 aa15.71■□□□□ 0.11
Nup54-201ENSMUST00000038514 Ppp4r3cQ3V0Y1 813 aa15.71■□□□□ 0.11
Nup54-201ENSMUST00000038514 PterQ60866 349 aa15.71■□□□□ 0.11
Nup54-201ENSMUST00000038514 Zfyve28Q6ZPK7 905 aa15.71■□□□□ 0.11
Nup54-201ENSMUST00000038514 Gpr151Q7TSN6 422 aa15.71■□□□□ 0.11
Nup54-201ENSMUST00000038514 NfascQ810U3 1240 aa15.71■□□□□ 0.11
Nup54-201ENSMUST00000038514 Hkdc1Q91W97 915 aa15.71■□□□□ 0.11
Nup54-201ENSMUST00000038514 Pcdha9Q91Y11 979 aa15.71■□□□□ 0.11
Nup54-201ENSMUST00000038514 Nxf1Q99JX7 618 aaKnown RBP15.71■□□□□ 0.11
Nup54-201ENSMUST00000038514 HemgnQ9ERZ0 503 aa15.71■□□□□ 0.11
Nup54-201ENSMUST00000038514 Skint3A7TZF0 458 aa15.71■□□□□ 0.11
Nup54-201ENSMUST00000038514 Eddm13E9Q7F5 164 aa15.71■□□□□ 0.11
Nup54-201ENSMUST00000038514 Tekt5G5E8A8 557 aa15.71■□□□□ 0.11
Nup54-201ENSMUST00000038514 ThbdP15306 577 aa15.71■□□□□ 0.11
Nup54-201ENSMUST00000038514 Nos2P29477 1144 aa15.71■□□□□ 0.11
Nup54-201ENSMUST00000038514 Cst8P32766 142 aa15.71■□□□□ 0.11
Nup54-201ENSMUST00000038514 Klf1P46099 358 aa15.71■□□□□ 0.11
Nup54-201ENSMUST00000038514 Runx2Q08775 607 aa15.71■□□□□ 0.11
Nup54-201ENSMUST00000038514 Elf3Q3UPW2 391 aa15.71■□□□□ 0.11
Nup54-201ENSMUST00000038514 DeptorQ570Y9 409 aa15.71■□□□□ 0.11
Nup54-201ENSMUST00000038514 Tab3Q571K4 716 aa15.71■□□□□ 0.11
Nup54-201ENSMUST00000038514 Vps72Q62481 368 aa15.71■□□□□ 0.11
Nup54-201ENSMUST00000038514 Kif11Q6P9P6 1052 aa15.71■□□□□ 0.11
Nup54-201ENSMUST00000038514 Znf507Q6ZPY5 941 aa15.71■□□□□ 0.11
Nup54-201ENSMUST00000038514 Crybg3Q80W49 1005 aa15.71■□□□□ 0.11
Nup54-201ENSMUST00000038514 Btbd10Q80X66 475 aa15.71■□□□□ 0.11
Nup54-201ENSMUST00000038514 Pdzph1Q8BGR1 1238 aa15.71■□□□□ 0.11
Nup54-201ENSMUST00000038514 6820408C15RikQ8BJX2 354 aa15.71■□□□□ 0.11
Nup54-201ENSMUST00000038514 Dhx32Q8BZS9 744 aa15.71■□□□□ 0.11
Nup54-201ENSMUST00000038514 Smtnl2Q8CI12 456 aa15.71■□□□□ 0.11
Nup54-201ENSMUST00000038514 Col23a1Q8K4G2 532 aa15.71■□□□□ 0.11
Nup54-201ENSMUST00000038514 Pofut2Q8VHI3 429 aa15.71■□□□□ 0.11
Nup54-201ENSMUST00000038514 Epn3Q91W69 636 aa15.71■□□□□ 0.11
Nup54-201ENSMUST00000038514 Gbp7Q91Z40 638 aa15.71■□□□□ 0.11
Nup54-201ENSMUST00000038514 Pde6cQ91ZQ1 861 aa15.71■□□□□ 0.11
Nup54-201ENSMUST00000038514 Cul2Q9D4H8 745 aa15.71■□□□□ 0.11
Nup54-201ENSMUST00000038514 PorcnQ9JJJ7 461 aa15.71■□□□□ 0.11
Nup54-201ENSMUST00000038514 MycsQ9Z304 431 aa15.71■□□□□ 0.11
Nup54-201ENSMUST00000038514 Gm27029A2A4P4 543 aa15.7■□□□□ 0.1
Nup54-201ENSMUST00000038514 Pagr1bF6V0H0 108 aa15.7■□□□□ 0.1
Nup54-201ENSMUST00000038514 Stra6O70491 670 aa15.7■□□□□ 0.1
Nup54-201ENSMUST00000038514 Rasgrf1P27671 1262 aa15.7■□□□□ 0.1
Nup54-201ENSMUST00000038514 Sh3bp2Q06649 559 aa15.7■□□□□ 0.1
Nup54-201ENSMUST00000038514 Neurl1bQ0MW30 546 aa15.7■□□□□ 0.1
Nup54-201ENSMUST00000038514 Zfyve27Q3TXX3 415 aa15.7■□□□□ 0.1
Nup54-201ENSMUST00000038514 Ugt3a1Q3UP75 523 aa15.7■□□□□ 0.1
Nup54-201ENSMUST00000038514 Acvrl1Q61288 502 aa15.7■□□□□ 0.1
Nup54-201ENSMUST00000038514 Xlr3cQ61806 226 aa15.7■□□□□ 0.1
Nup54-201ENSMUST00000038514 Rimbp2Q80U40 1072 aa15.7■□□□□ 0.1
Nup54-201ENSMUST00000038514 N4bp3Q8C7U1 537 aa15.7■□□□□ 0.1
Nup54-201ENSMUST00000038514 Plscr2Q9DCW2 307 aa15.7■□□□□ 0.1
Nup54-201ENSMUST00000038514 Ccdc22Q9JIG7 627 aa15.7■□□□□ 0.1
Nup54-201ENSMUST00000038514 Trpc2Q9R244 1172 aa15.7■□□□□ 0.1
Nup54-201ENSMUST00000038514 Arhgap42B2RQE8 841 aa15.7■□□□□ 0.1
Nup54-201ENSMUST00000038514 Zc3h7aE9PWW6 970 aaKnown RBP15.7■□□□□ 0.1
Nup54-201ENSMUST00000038514 AlplP09242 524 aa15.7■□□□□ 0.1
Nup54-201ENSMUST00000038514 Pdha1P35486 390 aaKnown RBP15.7■□□□□ 0.1
Nup54-201ENSMUST00000038514 Crnkl1P63154 690 aaKnown RBP15.7■□□□□ 0.1
Nup54-201ENSMUST00000038514 Epas1P97481 874 aa15.7■□□□□ 0.1
Retrieved 100 of 22,080 RNA–protein pairs in 24.4 ms