RNA–Protein interactions for RNA: ENSMUST00000030992.12

Rnf4-201, Transcript of E3 ubiquitin-protein ligase RNF4, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Rnf4, Length 2,895 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf4-201ENSMUST00000030992 Aldh5a1Q8BWF0 523 aa13.37□□□□□ -0.27
Rnf4-201ENSMUST00000030992 CgasQ8C6L5 507 aa13.37□□□□□ -0.27
Rnf4-201ENSMUST00000030992 Kctd12bQ8C7J6 292 aa13.37□□□□□ -0.27
Rnf4-201ENSMUST00000030992 Polr2bQ8CFI7 1174 aaKnown RBP13.37□□□□□ -0.27
Rnf4-201ENSMUST00000030992 Olfr385Q8VGT1 312 aa13.37□□□□□ -0.27
Rnf4-201ENSMUST00000030992 Pcdhb1Q91Y08 818 aa13.37□□□□□ -0.27
Rnf4-201ENSMUST00000030992 Nop56Q9D6Z1 580 aaKnown RBP13.37□□□□□ -0.27
Rnf4-201ENSMUST00000030992 Clcn2Q9R0A1 908 aa13.37□□□□□ -0.27
Rnf4-201ENSMUST00000030992 Atp6v0a1Q9Z1G4 839 aaKnown RBP13.37□□□□□ -0.27
Rnf4-201ENSMUST00000030992 Olfr1305A2AVW3 312 aa13.36□□□□□ -0.27
Rnf4-201ENSMUST00000030992 Abcb5B5X0E4 1255 aa13.36□□□□□ -0.27
Rnf4-201ENSMUST00000030992 Gm3460E9QAI8 215 aa13.36□□□□□ -0.27
Rnf4-201ENSMUST00000030992 Psmc1P62192 440 aa13.36□□□□□ -0.27
Rnf4-201ENSMUST00000030992 Runx2Q08775 607 aa13.36□□□□□ -0.27
Rnf4-201ENSMUST00000030992 Znf185Q62394 352 aa13.36□□□□□ -0.27
Rnf4-201ENSMUST00000030992 Sec23ipQ6NZC7 998 aa13.36□□□□□ -0.27
Rnf4-201ENSMUST00000030992 Trnp1Q80ZI1 223 aa13.36□□□□□ -0.27
Rnf4-201ENSMUST00000030992 Ireb2Q811J3 963 aaKnown RBP13.36□□□□□ -0.27
Rnf4-201ENSMUST00000030992 Ccdc186Q8C9S4 917 aa13.36□□□□□ -0.27
Rnf4-201ENSMUST00000030992 Smtnl2Q8CI12 456 aa13.36□□□□□ -0.27
Rnf4-201ENSMUST00000030992 Abcf3Q8K268 709 aa13.36□□□□□ -0.27
Rnf4-201ENSMUST00000030992 Trpv6Q91WD2 767 aa13.36□□□□□ -0.27
Rnf4-201ENSMUST00000030992 Kdelr1Q99JH8 212 aa13.36□□□□□ -0.27
Rnf4-201ENSMUST00000030992 PirQ9D711 290 aa13.36□□□□□ -0.27
Rnf4-201ENSMUST00000030992 Tbx20Q9ES03 445 aa13.36□□□□□ -0.27
Rnf4-201ENSMUST00000030992 Serpinb6eI7HJI3 429 aa13.36□□□□□ -0.27
Rnf4-201ENSMUST00000030992 Chrna1P04756 457 aa13.36□□□□□ -0.27
Rnf4-201ENSMUST00000030992 Myl1P05977 188 aa13.36□□□□□ -0.27
Rnf4-201ENSMUST00000030992 Rab20P35295 233 aa13.36□□□□□ -0.27
Rnf4-201ENSMUST00000030992 PorP37040 678 aa13.36□□□□□ -0.27
Rnf4-201ENSMUST00000030992 Stmn1P54227 149 aaKnown RBP13.36□□□□□ -0.27
Rnf4-201ENSMUST00000030992 Tll1Q62381 1013 aa13.36□□□□□ -0.27
Rnf4-201ENSMUST00000030992 Ugt1a1Q63886 535 aa13.36□□□□□ -0.27
Rnf4-201ENSMUST00000030992 Olfr392Q7TRX6 312 aa13.36□□□□□ -0.27
Rnf4-201ENSMUST00000030992 PhkbQ7TSH2 1085 aa13.36□□□□□ -0.27
Rnf4-201ENSMUST00000030992 HomezQ80W88 542 aa13.36□□□□□ -0.27
Rnf4-201ENSMUST00000030992 Wdr35Q8BND3 1181 aa13.36□□□□□ -0.27
Rnf4-201ENSMUST00000030992 MgarpQ8VI64 283 aa13.36□□□□□ -0.27
Rnf4-201ENSMUST00000030992 Mcrs1Q99L90 462 aa13.36□□□□□ -0.27
Rnf4-201ENSMUST00000030992 Mageb3Q9D2H4 330 aa13.36□□□□□ -0.27
Rnf4-201ENSMUST00000030992 Cd97Q9Z0M6 818 aa13.36□□□□□ -0.27
Rnf4-201ENSMUST00000030992 Nr1h3Q9Z0Y9 445 aa13.36□□□□□ -0.27
Rnf4-201ENSMUST00000030992 Net1Q9Z206 595 aa13.36□□□□□ -0.27
Rnf4-201ENSMUST00000030992 Diaph3Q9Z207 1171 aa13.36□□□□□ -0.27
Rnf4-201ENSMUST00000030992 Gm28360A0A087WR25 190 aa13.35□□□□□ -0.27
Rnf4-201ENSMUST00000030992 Zc3h12bG3X9I7 835 aa13.35□□□□□ -0.27
Rnf4-201ENSMUST00000030992 Capn6O35646 641 aa13.35□□□□□ -0.27
Rnf4-201ENSMUST00000030992 Ccnd3P30282 292 aa13.35□□□□□ -0.27
Rnf4-201ENSMUST00000030992 Ptpn11P35235 597 aa13.35□□□□□ -0.27
Rnf4-201ENSMUST00000030992 SftpdP50404 374 aa13.35□□□□□ -0.27
Rnf4-201ENSMUST00000030992 Mxi1P50540 228 aa13.35□□□□□ -0.27
Rnf4-201ENSMUST00000030992 Fam189a2Q4FZH1 290 aa13.35□□□□□ -0.27
Rnf4-201ENSMUST00000030992 Arhgap1Q5FWK3 439 aa13.35□□□□□ -0.27
Rnf4-201ENSMUST00000030992 Icam5Q60625 917 aa13.35□□□□□ -0.27
Rnf4-201ENSMUST00000030992 Bmp3Q8BHE5 468 aa13.35□□□□□ -0.27
Rnf4-201ENSMUST00000030992 Adgrf4Q9D2L6 698 aa13.35□□□□□ -0.27
Rnf4-201ENSMUST00000030992 Hsf2bpQ9D4G2 338 aa13.35□□□□□ -0.27
Rnf4-201ENSMUST00000030992 Sf3a3Q9D554 501 aaKnown RBP13.35□□□□□ -0.27
Rnf4-201ENSMUST00000030992 Ppp1r12aQ9DBR7 1029 aaKnown RBP13.35□□□□□ -0.27
Rnf4-201ENSMUST00000030992 Dpp7Q9ET22 506 aa13.35□□□□□ -0.27
Rnf4-201ENSMUST00000030992 Clec4aQ9QZ15 238 aa13.35□□□□□ -0.27
Rnf4-201ENSMUST00000030992 Ccdc152E9PX14 254 aa13.35□□□□□ -0.27
Rnf4-201ENSMUST00000030992 Gad2P48320 585 aa13.35□□□□□ -0.27
Rnf4-201ENSMUST00000030992 GckP52792 465 aa13.35□□□□□ -0.27
Rnf4-201ENSMUST00000030992 Pde1bQ01065 535 aa13.35□□□□□ -0.27
Rnf4-201ENSMUST00000030992 Cdca2Q14B71 982 aaKnown RBP13.35□□□□□ -0.27
Rnf4-201ENSMUST00000030992 CblbQ3TTA7 982 aa13.35□□□□□ -0.27
Rnf4-201ENSMUST00000030992 Trmt1Q3TX08 663 aa13.35□□□□□ -0.27
Rnf4-201ENSMUST00000030992 Fam81aQ3UXZ6 364 aa13.35□□□□□ -0.27
Rnf4-201ENSMUST00000030992 Ddx49Q4FZF3 480 aaKnown RBP13.35□□□□□ -0.27
Rnf4-201ENSMUST00000030992 Vmn2r43Q80Z08 845 aa13.35□□□□□ -0.27
Rnf4-201ENSMUST00000030992 Dars2Q8BIP0 653 aa13.35□□□□□ -0.27
Rnf4-201ENSMUST00000030992 Tdp1Q8BJ37 609 aa13.35□□□□□ -0.27
Rnf4-201ENSMUST00000030992 Pcdha10Q91Y20 946 aa13.35□□□□□ -0.27
Rnf4-201ENSMUST00000030992 Lpgat1Q91YX5 370 aa13.35□□□□□ -0.27
Rnf4-201ENSMUST00000030992 Q9DA42 136 aa13.35□□□□□ -0.27
Rnf4-201ENSMUST00000030992 Scyl3Q9DBQ7 735 aa13.35□□□□□ -0.27
Rnf4-201ENSMUST00000030992 Tmed2Q9R0Q3 201 aa13.35□□□□□ -0.27
Rnf4-201ENSMUST00000030992 Sgk1Q9WVC6 431 aa13.35□□□□□ -0.27
Rnf4-201ENSMUST00000030992 Ssxb9A2BI93 185 aa13.34□□□□□ -0.27
Rnf4-201ENSMUST00000030992 PotegA5H0M4 473 aa13.34□□□□□ -0.27
Rnf4-201ENSMUST00000030992 B020004C17RikJ3QP07 232 aa13.34□□□□□ -0.27
Rnf4-201ENSMUST00000030992 Ppargc1aO70343 797 aa13.34□□□□□ -0.27
Rnf4-201ENSMUST00000030992 Fgfr1P16092 822 aa13.34□□□□□ -0.27
Rnf4-201ENSMUST00000030992 Eno1P17182 434 aaKnown RBP13.34□□□□□ -0.27
Rnf4-201ENSMUST00000030992 Gjb1P28230 283 aa13.34□□□□□ -0.27
Rnf4-201ENSMUST00000030992 Oprl1P35377 367 aa13.34□□□□□ -0.27
Rnf4-201ENSMUST00000030992 Slc1a2P43006 572 aa13.34□□□□□ -0.27
Rnf4-201ENSMUST00000030992 Zscan2Q07230 614 aa13.34□□□□□ -0.27
Rnf4-201ENSMUST00000030992 Znf112Q0VAW7 879 aa13.34□□□□□ -0.27
Rnf4-201ENSMUST00000030992 Hexim2Q3TVI4 313 aa13.34□□□□□ -0.27
Rnf4-201ENSMUST00000030992 Hace1Q3U0D9 909 aa13.34□□□□□ -0.27
Rnf4-201ENSMUST00000030992 Birc2Q62210 612 aa13.34□□□□□ -0.27
Rnf4-201ENSMUST00000030992 Sulf1Q8K007 870 aa13.34□□□□□ -0.27
Rnf4-201ENSMUST00000030992 Me2Q99KE1 589 aa13.34□□□□□ -0.27
Rnf4-201ENSMUST00000030992 Ccdc182Q9D9C6 152 aa13.34□□□□□ -0.27
Rnf4-201ENSMUST00000030992 Mrpl4Q9DCU6 294 aaKnown RBP13.34□□□□□ -0.27
Rnf4-201ENSMUST00000030992 Plscr2Q9DCW2 307 aa13.34□□□□□ -0.27
Rnf4-201ENSMUST00000030992 Pappa2E9PZ87 1789 aa13.34□□□□□ -0.27
Rnf4-201ENSMUST00000030992 Ms4a14A0A087WSD2 1232 aa13.34□□□□□ -0.27
Retrieved 100 of 22,080 RNA–protein pairs in 23.9 ms