RNA–Protein interactions for RNA: ENSMUST00000005841.15

Ctcf-201, Transcript of Transcriptional repressor CTCF, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ctcf, Length 3,782 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ctcf-201ENSMUST00000005841 ClcnkbQ9WUB6 687 aa17.7■□□□□ 0.42
Ctcf-201ENSMUST00000005841 Mettl1Q9Z120 268 aa17.7■□□□□ 0.42
Ctcf-201ENSMUST00000005841 Ntrk1Q3UFB7 799 aa17.69■□□□□ 0.42
Ctcf-201ENSMUST00000005841 Fam92bQ3V2J0 292 aa17.69■□□□□ 0.42
Ctcf-201ENSMUST00000005841 Syn2Q64332 586 aa17.69■□□□□ 0.42
Ctcf-201ENSMUST00000005841 Tfb1mQ8JZM0 345 aaKnown RBP17.69■□□□□ 0.42
Ctcf-201ENSMUST00000005841 Rin2Q9D684 903 aa17.69■□□□□ 0.42
Ctcf-201ENSMUST00000005841 Q9DAQ4 598 aa17.69■□□□□ 0.42
Ctcf-201ENSMUST00000005841 Anxa9Q9JHQ0 345 aa17.69■□□□□ 0.42
Ctcf-201ENSMUST00000005841 Btbd35f15A0A087WR44 498 aa17.69■□□□□ 0.42
Ctcf-201ENSMUST00000005841 Btbd35f12A0A0A0MQP3 498 aa17.69■□□□□ 0.42
Ctcf-201ENSMUST00000005841 Bfsp1A2AMT1 669 aa17.69■□□□□ 0.42
Ctcf-201ENSMUST00000005841 Btbd35f9A2BFZ7 498 aa17.69■□□□□ 0.42
Ctcf-201ENSMUST00000005841 Btbd35f7A2BHG6 498 aa17.69■□□□□ 0.42
Ctcf-201ENSMUST00000005841 Btbd35f19A2CG71 498 aa17.69■□□□□ 0.42
Ctcf-201ENSMUST00000005841 Btbd35f10A2CG92 498 aa17.69■□□□□ 0.42
Ctcf-201ENSMUST00000005841 Btbd35f3A2CGC2 496 aa17.69■□□□□ 0.42
Ctcf-201ENSMUST00000005841 Btbd35f13B8JKF6 498 aa17.69■□□□□ 0.42
Ctcf-201ENSMUST00000005841 Btbd35f2J3QMS5 498 aa17.69■□□□□ 0.42
Ctcf-201ENSMUST00000005841 Btbd35f25J3QMV9 498 aa17.69■□□□□ 0.42
Ctcf-201ENSMUST00000005841 Btbd35f6J3QMW9 498 aa17.69■□□□□ 0.42
Ctcf-201ENSMUST00000005841 Btbd35f26J3QNK2 498 aa17.69■□□□□ 0.42
Ctcf-201ENSMUST00000005841 Btbd35f24J3QNQ5 498 aa17.69■□□□□ 0.42
Ctcf-201ENSMUST00000005841 Btbd35f8J3QQ50 498 aa17.69■□□□□ 0.42
Ctcf-201ENSMUST00000005841 Btbd35f17L7MU81 498 aa17.69■□□□□ 0.42
Ctcf-201ENSMUST00000005841 Btbd35f18L7MU83 498 aa17.69■□□□□ 0.42
Ctcf-201ENSMUST00000005841 InvsO89019 1062 aa17.69■□□□□ 0.42
Ctcf-201ENSMUST00000005841 Krt19P19001 403 aa17.69■□□□□ 0.42
Ctcf-201ENSMUST00000005841 Dsc2P55292 902 aa17.69■□□□□ 0.42
Ctcf-201ENSMUST00000005841 Btbd35f14Q1LZI5 498 aa17.69■□□□□ 0.42
Ctcf-201ENSMUST00000005841 Btbd35f27Q5FWA1 498 aa17.69■□□□□ 0.42
Ctcf-201ENSMUST00000005841 GMCL1P1Q99N64 498 aa17.69■□□□□ 0.42
Ctcf-201ENSMUST00000005841 Rdh14Q9ERI6 334 aa17.69■□□□□ 0.42
Ctcf-201ENSMUST00000005841 Slc13a1Q9JHI4 594 aa17.69■□□□□ 0.42
Ctcf-201ENSMUST00000005841 Pdk2Q9JK42 407 aa17.69■□□□□ 0.42
Ctcf-201ENSMUST00000005841 StrcQ8VIM6 1809 aa17.69■□□□□ 0.42
Ctcf-201ENSMUST00000005841 Per1O35973 1291 aa17.69■□□□□ 0.42
Ctcf-201ENSMUST00000005841 Traf3Q60803 567 aa17.69■□□□□ 0.42
Ctcf-201ENSMUST00000005841 PterQ60866 349 aa17.69■□□□□ 0.42
Ctcf-201ENSMUST00000005841 Camta2Q80Y50 1208 aa17.69■□□□□ 0.42
Ctcf-201ENSMUST00000005841 Ciapin1Q8WTY4 309 aa17.69■□□□□ 0.42
Ctcf-201ENSMUST00000005841 Yipf1Q91VU1 306 aa17.69■□□□□ 0.42
Ctcf-201ENSMUST00000005841 HarsQ61035 509 aa17.68■□□□□ 0.42
Ctcf-201ENSMUST00000005841 Nab1Q61122 486 aa17.68■□□□□ 0.42
Ctcf-201ENSMUST00000005841 Plcg2Q8CIH5 1265 aa17.68■□□□□ 0.42
Ctcf-201ENSMUST00000005841 Prorsd1Q9D820 169 aa17.68■□□□□ 0.42
Ctcf-201ENSMUST00000005841 DpysQ9EQF5 519 aa17.68■□□□□ 0.42
Ctcf-201ENSMUST00000005841 Cntnap4Q99P47 1310 aa17.68■□□□□ 0.42
Ctcf-201ENSMUST00000005841 Ltbp1Q8CG19 1712 aa17.68■□□□□ 0.42
Ctcf-201ENSMUST00000005841 Rad51bO35719 350 aa17.68■□□□□ 0.42
Ctcf-201ENSMUST00000005841 Dlg3P70175 849 aa17.68■□□□□ 0.42
Ctcf-201ENSMUST00000005841 Kcna4Q61423 654 aa17.68■□□□□ 0.42
Ctcf-201ENSMUST00000005841 Frmd5Q6P5H6 517 aa17.68■□□□□ 0.42
Ctcf-201ENSMUST00000005841 TdrkhQ80VL1 560 aa17.68■□□□□ 0.42
Ctcf-201ENSMUST00000005841 Usp1Q8BJQ2 784 aa17.68■□□□□ 0.42
Ctcf-201ENSMUST00000005841 Tbc1d20Q9D9I4 402 aa17.68■□□□□ 0.42
Ctcf-201ENSMUST00000005841 Msh5Q9QUM7 833 aa17.68■□□□□ 0.42
Ctcf-201ENSMUST00000005841 Gcnt4E9Q649 455 aa17.68■□□□□ 0.42
Ctcf-201ENSMUST00000005841 Gm21973F6WEZ7 68 aa17.68■□□□□ 0.42
Ctcf-201ENSMUST00000005841 Nos2P29477 1144 aa17.68■□□□□ 0.42
Ctcf-201ENSMUST00000005841 Trpm4Q7TN37 1213 aa17.68■□□□□ 0.42
Ctcf-201ENSMUST00000005841 Znf385bQ8BXJ8 482 aaKnown RBP17.68■□□□□ 0.42
Ctcf-201ENSMUST00000005841 Strip1Q8C079 837 aa17.68■□□□□ 0.42
Ctcf-201ENSMUST00000005841 Kbtbd13Q8C828 458 aa17.68■□□□□ 0.42
Ctcf-201ENSMUST00000005841 Myef2Q8C854 591 aaKnown RBP17.68■□□□□ 0.42
Ctcf-201ENSMUST00000005841 Npm3Q9CPP0 175 aaKnown RBP17.68■□□□□ 0.42
Ctcf-201ENSMUST00000005841 Neu2Q9JMH3 379 aa17.68■□□□□ 0.42
Ctcf-201ENSMUST00000005841 Plekhg4A0A1L1SU27 1217 aa17.67■□□□□ 0.42
Ctcf-201ENSMUST00000005841 Kcng2F7A6P6 480 aa17.67■□□□□ 0.42
Ctcf-201ENSMUST00000005841 Pde6bP23440 856 aa17.67■□□□□ 0.42
Ctcf-201ENSMUST00000005841 Rit2P70425 217 aa17.67■□□□□ 0.42
Ctcf-201ENSMUST00000005841 Kctd8Q50H33 476 aa17.67■□□□□ 0.42
Ctcf-201ENSMUST00000005841 Calhm4Q8CE93 315 aa17.67■□□□□ 0.42
Ctcf-201ENSMUST00000005841 Prkag2Q91WG5 566 aa17.67■□□□□ 0.42
Ctcf-201ENSMUST00000005841 Lman1Q9D0F3 517 aa17.67■□□□□ 0.42
Ctcf-201ENSMUST00000005841 Azi2Q9QYP6 405 aa17.67■□□□□ 0.42
Ctcf-201ENSMUST00000005841 Krt16Q9Z2K1 469 aa17.67■□□□□ 0.42
Ctcf-201ENSMUST00000005841 Tcp11x2A2AEI7 503 aa17.67■□□□□ 0.42
Ctcf-201ENSMUST00000005841 Ccdc144bE9PVZ3 520 aa17.67■□□□□ 0.42
Ctcf-201ENSMUST00000005841 Rpl7aP12970 266 aaKnown RBP17.67■□□□□ 0.42
Ctcf-201ENSMUST00000005841 Psg28Q4KL66 472 aa17.67■□□□□ 0.42
Ctcf-201ENSMUST00000005841 Stip1Q60864 543 aaKnown RBP17.67■□□□□ 0.42
Ctcf-201ENSMUST00000005841 Dpysl3Q62188 570 aa17.67■□□□□ 0.42
Ctcf-201ENSMUST00000005841 Tmcc1Q69ZZ6 649 aa17.67■□□□□ 0.42
Ctcf-201ENSMUST00000005841 ItpkcQ7TS72 678 aa17.67■□□□□ 0.42
Ctcf-201ENSMUST00000005841 Klhl11Q8CE33 709 aa17.67■□□□□ 0.42
Ctcf-201ENSMUST00000005841 Acat1Q8QZT1 424 aa17.67■□□□□ 0.42
Ctcf-201ENSMUST00000005841 Pdk3Q922H2 415 aaKnown RBP17.67■□□□□ 0.42
Ctcf-201ENSMUST00000005841 Sdr42e1Q9D665 394 aa17.67■□□□□ 0.42
Ctcf-201ENSMUST00000005841 Ptf1aQ9QX98 324 aa17.67■□□□□ 0.42
Ctcf-201ENSMUST00000005841 Slc6a16A0A1L1SR47 742 aa17.67■□□□□ 0.42
Ctcf-201ENSMUST00000005841 Adgrf2E9Q4J9 644 aa17.67■□□□□ 0.42
Ctcf-201ENSMUST00000005841 Nedd9O35177 833 aa17.67■□□□□ 0.42
Ctcf-201ENSMUST00000005841 Tff2Q03404 129 aa17.67■□□□□ 0.42
Ctcf-201ENSMUST00000005841 Trim21Q62191 470 aa17.67■□□□□ 0.42
Ctcf-201ENSMUST00000005841 Olfr1505Q7TQQ2 316 aa17.67■□□□□ 0.42
Ctcf-201ENSMUST00000005841 Q8BGN9 141 aa17.67■□□□□ 0.42
Ctcf-201ENSMUST00000005841 Lrrc19Q8BZT5 364 aa17.67■□□□□ 0.42
Ctcf-201ENSMUST00000005841 Spag16Q8K450 639 aa17.67■□□□□ 0.42
Ctcf-201ENSMUST00000005841 Drc3Q9D5E4 523 aa17.67■□□□□ 0.42
Retrieved 100 of 22,080 RNA–protein pairs in 13.7 ms