RNA–Protein interactions for RNA: YER088C

DOT6, Transcript of Protein involved in rRNA and ribosome biogenesis, yeast

Gene DOT6, Length 2,013 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
DOT6	YER088C	YMR105W-A	Q8TGS8	64 aa		1.16	□□□□□ -2.22
DOT6	YER088C	YHR212W-A	P0CX91	67 aa		1.16	□□□□□ -2.22
DOT6	YER088C	PHO85	P17157	305 aa		1.16	□□□□□ -2.22
DOT6	YER088C	CCA1	P21269	546 aa		1.16	□□□□□ -2.22
DOT6	YER088C	SEC22	P22214	214 aa		1.16	□□□□□ -2.22
DOT6	YER088C	ASF2	P32448	525 aa	Predicted RBP	1.16	□□□□□ -2.22
DOT6	YER088C	NTF2	P33331	125 aa	Known RBP	1.16	□□□□□ -2.22
DOT6	YER088C	NRG2	P38082	220 aa		1.16	□□□□□ -2.22
DOT6	YER088C	TRM5	P38793	499 aa		1.16	□□□□□ -2.22
DOT6	YER088C	IKI1	P38874	309 aa		1.16	□□□□□ -2.22
DOT6	YER088C	RMD6	P39975	231 aa		1.16	□□□□□ -2.22
DOT6	YER088C	YJL027C	P47063	138 aa	Predicted RBP	1.16	□□□□□ -2.22
DOT6	YER088C	BAT2	P47176	376 aa	Known RBP	1.16	□□□□□ -2.22
DOT6	YER088C	CCC1	P47818	322 aa		1.16	□□□□□ -2.22
DOT6	YER088C	MGA1	P53050	456 aa		1.16	□□□□□ -2.22
DOT6	YER088C	BRR6	P53062	197 aa		1.16	□□□□□ -2.22
DOT6	YER088C	YGL101W	P53144	215 aa		1.16	□□□□□ -2.22
DOT6	YER088C	DML1	Q03652	475 aa		1.16	□□□□□ -2.22
DOT6	YER088C	AIM36	Q03798	255 aa		1.16	□□□□□ -2.22
DOT6	YER088C	GGA1	Q06336	557 aa		1.16	□□□□□ -2.22
DOT6	YER088C	RFU1	Q08003	200 aa		1.16	□□□□□ -2.22
DOT6	YER088C	YOR186W	Q08560	144 aa		1.16	□□□□□ -2.22
DOT6	YER088C	YDR157W	A0A023PZE8	133 aa		1.15	□□□□□ -2.22
DOT6	YER088C	COX5B	P00425	151 aa		1.15	□□□□□ -2.22
DOT6	YER088C	YOL162W	P0CF19	215 aa		1.15	□□□□□ -2.22
DOT6	YER088C	URA6	P15700	204 aa		1.15	□□□□□ -2.22
DOT6	YER088C	NUF2	P33895	451 aa		1.15	□□□□□ -2.22
DOT6	YER088C	YBR063C	P38083	404 aa		1.15	□□□□□ -2.22
DOT6	YER088C	YFR035C	P43608	114 aa		1.15	□□□□□ -2.22
DOT6	YER088C	OST2	P46964	130 aa		1.15	□□□□□ -2.22
DOT6	YER088C	ALG13	P53178	202 aa		1.15	□□□□□ -2.22
DOT6	YER088C	YPL067C	Q02754	198 aa		1.15	□□□□□ -2.22
DOT6	YER088C	YDR248C	Q03786	193 aa		1.15	□□□□□ -2.22
DOT6	YER088C	GPI17	Q04080	534 aa		1.15	□□□□□ -2.22
DOT6	YER088C	NSL1	Q12143	216 aa		1.15	□□□□□ -2.22
DOT6	YER088C	TMA19	P35691	167 aa	Known RBP	1.15	□□□□□ -2.23
DOT6	YER088C	IRC18	P47056	224 aa		1.15	□□□□□ -2.23
DOT6	YER088C	SOL1	P50278	321 aa		1.15	□□□□□ -2.23
DOT6	YER088C	HOR7	Q05827	59 aa		1.15	□□□□□ -2.23
DOT6	YER088C	PRM3	Q08931	133 aa		1.15	□□□□□ -2.23
DOT6	YER088C	LSO2	Q3E772	92 aa	Known RBP	1.15	□□□□□ -2.23
DOT6	YER088C	YPL229W	Q99395	206 aa		1.15	□□□□□ -2.23
DOT6	YER088C	SIR2	P06700	562 aa		1.14	□□□□□ -2.23
DOT6	YER088C	GRX2	P17695	143 aa	Known RBP	1.14	□□□□□ -2.23
DOT6	YER088C	ROX3	P25046	220 aa		1.14	□□□□□ -2.23
DOT6	YER088C	RPC19	P28000	142 aa	Known RBP	1.14	□□□□□ -2.23
DOT6	YER088C	SRP102	P36057	244 aa	Predicted RBP	1.14	□□□□□ -2.23
DOT6	YER088C	MTW1	P39731	289 aa		1.14	□□□□□ -2.23
DOT6	YER088C	VPS55	P47111	140 aa		1.14	□□□□□ -2.23
DOT6	YER088C	BXI1	P48558	297 aa		1.14	□□□□□ -2.23
DOT6	YER088C	RMR1	P53060	241 aa		1.14	□□□□□ -2.23
DOT6	YER088C	FAR8	Q05040	523 aa		1.14	□□□□□ -2.23
DOT6	YER088C	YLR179C	Q06252	201 aa	Known RBP	1.14	□□□□□ -2.23
DOT6	YER088C	BBP1	Q12365	385 aa		1.14	□□□□□ -2.23
DOT6	YER088C	YHR086W-A	Q3E746	53 aa		1.14	□□□□□ -2.23
DOT6	YER088C	HTL1	Q9URQ5	78 aa		1.14	□□□□□ -2.23
DOT6	YER088C	RFA3	P26755	122 aa	Known RBP	1.13	□□□□□ -2.23
DOT6	YER088C	ATP7	P30902	174 aa		1.13	□□□□□ -2.23
DOT6	YER088C	RCN1	P36054	211 aa		1.13	□□□□□ -2.23
DOT6	YER088C	MPM1	P40364	252 aa		1.13	□□□□□ -2.23
DOT6	YER088C	SNX4	P47057	423 aa		1.13	□□□□□ -2.23
DOT6	YER088C	NUP49	Q02199	472 aa		1.13	□□□□□ -2.23
DOT6	YER088C	SNZ1	Q03148	297 aa		1.13	□□□□□ -2.23
DOT6	YER088C	YMD8	Q03697	442 aa		1.13	□□□□□ -2.23
DOT6	YER088C	YHP1	Q04116	353 aa		1.13	□□□□□ -2.23
DOT6	YER088C	YPL257W	Q08974	193 aa		1.13	□□□□□ -2.23
DOT6	YER088C	CDC28	P00546	298 aa	Known RBP	1.13	□□□□□ -2.23
DOT6	YER088C	Q0255	P03881	472 aa		1.13	□□□□□ -2.23
DOT6	YER088C	ADH3	P07246	375 aa	Known RBP	1.13	□□□□□ -2.23
DOT6	YER088C	RPL30	P14120	105 aa	Known RBP	1.13	□□□□□ -2.23
DOT6	YER088C	GCN3	P14741	305 aa		1.13	□□□□□ -2.23
DOT6	YER088C	ERG24	P32462	438 aa	Known RBP	1.13	□□□□□ -2.23
DOT6	YER088C	SPS18	P32572	300 aa		1.13	□□□□□ -2.23
DOT6	YER088C	ARC19	P33204	171 aa	Known RBP	1.13	□□□□□ -2.23
DOT6	YER088C	CPR5	P35176	225 aa		1.13	□□□□□ -2.23
DOT6	YER088C	APS1	P35181	156 aa		1.13	□□□□□ -2.23
DOT6	YER088C	COS8	P38723	381 aa		1.13	□□□□□ -2.23
DOT6	YER088C	MPC2	P38857	129 aa		1.13	□□□□□ -2.23
DOT6	YER088C	YAR068W	P39564	161 aa		1.13	□□□□□ -2.23
DOT6	YER088C	PEX17	P40155	199 aa		1.13	□□□□□ -2.23
DOT6	YER088C	BMT5	P40493	336 aa		1.13	□□□□□ -2.23
DOT6	YER088C	CAT5	P41735	233 aa		1.13	□□□□□ -2.23
DOT6	YER088C	FAR7	P43592	221 aa		1.13	□□□□□ -2.23
DOT6	YER088C	PRM8	P53174	237 aa		1.13	□□□□□ -2.23
DOT6	YER088C	PDR17	P53844	350 aa		1.13	□□□□□ -2.23
DOT6	YER088C	YDR274C	P87283	123 aa		1.13	□□□□□ -2.23
DOT6	YER088C	ABF2	Q02486	183 aa		1.13	□□□□□ -2.23
DOT6	YER088C	YOR289W	Q12012	251 aa	Predicted RBP	1.13	□□□□□ -2.23
DOT6	YER088C	YOR020W-A	Q3E824	90 aa		1.13	□□□□□ -2.23
DOT6	YER088C	RIB3	Q99258	208 aa		1.13	□□□□□ -2.23
DOT6	YER088C	QCR7	P00128	127 aa		1.12	□□□□□ -2.23
DOT6	YER088C	REP2	P03872	296 aa		1.12	□□□□□ -2.23
DOT6	YER088C	DOG1	P38774	246 aa		1.12	□□□□□ -2.23
DOT6	YER088C	EGD2	P38879	174 aa	Known RBP	1.12	□□□□□ -2.23
DOT6	YER088C	SEC72	P39742	193 aa	Known RBP	1.12	□□□□□ -2.23
DOT6	YER088C	TOS8	P53147	276 aa		1.12	□□□□□ -2.23
DOT6	YER088C	MMS2	P53152	137 aa		1.12	□□□□□ -2.23
DOT6	YER088C	ERV29	P53337	310 aa		1.12	□□□□□ -2.23
DOT6	YER088C	YKR005C	Q02203	525 aa		1.12	□□□□□ -2.23
DOT6	YER088C	UPS1	Q05776	175 aa		1.12	□□□□□ -2.23

Retrieved 100 of 5,963 RNA–protein pairs in 116.9 ms