RNA–Protein interactions for RNA: YDR146C

SWI5, Transcript of Transcription factor that recruits Mediator and Swi/Snf complexes, yeastyeast

Gene SWI5, Length 2,130 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SWI5YDR146C RPL37BP51402 88 aaKnown RBP0.6□□□□□ -2.31
SWI5YDR146C YGL230CP53074 147 aa0.6□□□□□ -2.31
SWI5YDR146C FIT1Q04433 528 aa0.6□□□□□ -2.31
SWI5YDR146C CCW12Q12127 133 aa0.6□□□□□ -2.31
SWI5YDR146C CHD1P32657 1468 aa0.6□□□□□ -2.31
SWI5YDR146C AHT1P29589 182 aa0.59□□□□□ -2.31
SWI5YDR146C YFL051CP43552 160 aa0.59□□□□□ -2.31
SWI5YDR146C AVO2Q04749 426 aa0.59□□□□□ -2.31
SWI5YDR146C SHB17P36136 271 aaKnown RBP0.59□□□□□ -2.32
SWI5YDR146C SBH2P52871 88 aa0.59□□□□□ -2.32
SWI5YDR146C THI74Q04083 370 aa0.59□□□□□ -2.32
SWI5YDR146C SYM1Q06563 197 aa0.59□□□□□ -2.32
SWI5YDR146C PEX11Q12462 236 aa0.59□□□□□ -2.32
SWI5YDR146C RAD6P06104 172 aa0.58□□□□□ -2.32
SWI5YDR146C INO4P13902 151 aa0.58□□□□□ -2.32
SWI5YDR146C YKR070WP36151 352 aaKnown RBP0.58□□□□□ -2.32
SWI5YDR146C YEL028WP39989 153 aa0.58□□□□□ -2.32
SWI5YDR146C GLR1P41921 483 aaKnown RBP0.58□□□□□ -2.32
SWI5YDR146C DCV1P43595 202 aa0.58□□□□□ -2.32
SWI5YDR146C GRX5Q02784 150 aa0.58□□□□□ -2.32
SWI5YDR146C GLC8P41818 229 aa0.58□□□□□ -2.32
SWI5YDR146C TIM13P53299 105 aa0.58□□□□□ -2.32
SWI5YDR146C SRP14P38985 146 aa0.57□□□□□ -2.32
SWI5YDR146C YGR269WP40326 108 aa0.57□□□□□ -2.32
SWI5YDR146C YML079WQ03629 201 aa0.57□□□□□ -2.32
SWI5YDR146C YDR102CQ03864 110 aa0.57□□□□□ -2.32
SWI5YDR146C YDL241WQ07738 123 aa0.57□□□□□ -2.32
SWI5YDR146C SPS2P08459 502 aa0.56□□□□□ -2.32
SWI5YDR146C YER121WP40076 114 aa0.56□□□□□ -2.32
SWI5YDR146C MOB1P40484 314 aa0.56□□□□□ -2.32
SWI5YDR146C YJR015WP47090 510 aa0.56□□□□□ -2.32
SWI5YDR146C GIM5Q04493 163 aa0.56□□□□□ -2.32
SWI5YDR146C YPR114WQ06107 315 aa0.56□□□□□ -2.32
SWI5YDR146C ATG10Q07879 167 aa0.56□□□□□ -2.32
SWI5YDR146C TRM3Q07527 1436 aa0.56□□□□□ -2.32
SWI5YDR146C CMD1P06787 147 aaKnown RBP0.56□□□□□ -2.32
SWI5YDR146C APS3P47064 194 aa0.56□□□□□ -2.32
SWI5YDR146C HHT1P61830 136 aa0.56□□□□□ -2.32
SWI5YDR146C LIP1Q03579 150 aa0.56□□□□□ -2.32
SWI5YDR146C PLP1Q04004 230 aa0.56□□□□□ -2.32
SWI5YDR146C KEI1Q06346 221 aa0.56□□□□□ -2.32
SWI5YDR146C KIN28P06242 306 aa0.55□□□□□ -2.32
SWI5YDR146C RPS25BP0C0T4 108 aaKnown RBP0.55□□□□□ -2.32
SWI5YDR146C YPT31P38555 223 aaKnown RBP0.55□□□□□ -2.32
SWI5YDR146C YAR064WP39563 99 aa0.55□□□□□ -2.32
SWI5YDR146C YDC1Q02896 317 aa0.55□□□□□ -2.32
SWI5YDR146C YDL157CQ12082 118 aa0.55□□□□□ -2.32
SWI5YDR146C RPS25AQ3E792 108 aaPredicted RBP0.55□□□□□ -2.32
SWI5YDR146C HFA1P32874 2273 aa0.55□□□□□ -2.32
SWI5YDR146C YIL102CP40488 101 aa0.55□□□□□ -2.32
SWI5YDR146C ORM1P53224 222 aa0.55□□□□□ -2.32
SWI5YDR146C CMC4Q3E7A9 73 aa0.55□□□□□ -2.32
SWI5YDR146C SPT14P32363 452 aa0.54□□□□□ -2.32
SWI5YDR146C TMA23Q03525 211 aa0.54□□□□□ -2.32
SWI5YDR146C ATP5P09457 212 aa0.53□□□□□ -2.32
SWI5YDR146C YOL013W-AP0C272 63 aaPredicted RBP0.53□□□□□ -2.32
SWI5YDR146C UBI4P0CG63 381 aaKnown RBP0.53□□□□□ -2.32
SWI5YDR146C MRS4P23500 304 aa0.53□□□□□ -2.32
SWI5YDR146C PTC1P35182 281 aa0.53□□□□□ -2.32
SWI5YDR146C YNR064CP53750 290 aa0.53□□□□□ -2.32
SWI5YDR146C RDI1Q12434 202 aa0.53□□□□□ -2.32
SWI5YDR146C TAF2P23255 1407 aa0.53□□□□□ -2.32
SWI5YDR146C YGL101WP53144 215 aa0.53□□□□□ -2.32
SWI5YDR146C TMA20P89886 181 aaPredicted RBP0.53□□□□□ -2.32
SWI5YDR146C PRE1P22141 198 aaKnown RBP0.52□□□□□ -2.33
SWI5YDR146C SRP102P36057 244 aaPredicted RBP0.52□□□□□ -2.33
SWI5YDR146C VPS51P36116 164 aa0.52□□□□□ -2.33
SWI5YDR146C ATG8P38182 117 aaRIP-Chip data0.52□□□□□ -2.33not detected
SWI5YDR146C FES1P38260 290 aa0.52□□□□□ -2.33
SWI5YDR146C LSM3P57743 89 aaKnown RBP0.52□□□□□ -2.33
SWI5YDR146C HRD1Q08109 551 aa0.52□□□□□ -2.33
SWI5YDR146C UIP4Q08926 304 aa0.52□□□□□ -2.33
SWI5YDR146C FCY1Q12178 158 aa0.52□□□□□ -2.33
SWI5YDR146C CDC39P25655 2108 aaKnown RBP0.52□□□□□ -2.33
SWI5YDR146C CCC1P47818 322 aa0.52□□□□□ -2.33
SWI5YDR146C YLR053CQ12026 108 aa0.52□□□□□ -2.33
SWI5YDR146C CMC2Q3E7A4 109 aa0.52□□□□□ -2.33
SWI5YDR146C RIB3Q99258 208 aa0.52□□□□□ -2.33
SWI5YDR146C SAC3P46674 1301 aa0.51□□□□□ -2.33
SWI5YDR146C FMP49A0A023PZB3 126 aa0.51□□□□□ -2.33
SWI5YDR146C YBR027CP38220 110 aa0.51□□□□□ -2.33
SWI5YDR146C SLM6P38343 150 aa0.51□□□□□ -2.33
SWI5YDR146C DLS1P40366 167 aa0.51□□□□□ -2.33
SWI5YDR146C GEP7P53171 287 aa0.51□□□□□ -2.33
SWI5YDR146C RPL30P14120 105 aaKnown RBP0.5□□□□□ -2.33
SWI5YDR146C YCR001WP25347 104 aa0.5□□□□□ -2.33
SWI5YDR146C HTD2P38790 280 aaKnown RBP0.5□□□□□ -2.33
SWI5YDR146C HHY1P39982 102 aa0.5□□□□□ -2.33
SWI5YDR146C YEL014CP39999 101 aa0.5□□□□□ -2.33
SWI5YDR146C CIN5P40917 295 aa0.5□□□□□ -2.33
SWI5YDR146C FIP1P45976 327 aa0.5□□□□□ -2.33
SWI5YDR146C SRP21P32342 167 aa0.5□□□□□ -2.33
SWI5YDR146C NMA1Q06178 401 aaKnown RBP0.5□□□□□ -2.33
SWI5YDR146C YPR202WQ08993 238 aa0.5□□□□□ -2.33
SWI5YDR146C YLR046CQ12253 270 aa0.5□□□□□ -2.33
SWI5YDR146C ADE6P38972 1358 aaKnown RBP0.5□□□□□ -2.33
SWI5YDR146C HSP150P32478 413 aa0.49□□□□□ -2.33
SWI5YDR146C APQ12P40532 138 aa0.49□□□□□ -2.33
SWI5YDR146C SEN15Q04675 128 aa0.49□□□□□ -2.33
SWI5YDR146C IRC19Q07843 230 aa0.49□□□□□ -2.33
Retrieved 100 of 5,963 RNA–protein pairs in 26.4 ms