RNA–Protein interactions for RNA: ENST00000642021.1

PHGDH-233, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,794 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-233ENST00000642021 EFTUD2Q15029 972 aaKnown RBP eCLIP14.58□□□□□ -0.073e-6■■■■□ 23.9
PHGDH-233ENST00000642021 VSIG1Q86XK7 387 aa14.58□□□□□ -0.07
PHGDH-233ENST00000642021 TAB3Q8N5C8 712 aaPredicted RBP14.58□□□□□ -0.07
PHGDH-233ENST00000642021 WDTC1Q8N5D0 677 aa14.58□□□□□ -0.07
PHGDH-233ENST00000642021 RBM41Q96IZ5 413 aaKnown RBP14.58□□□□□ -0.07
PHGDH-233ENST00000642021 C12orf65Q9H3J6 166 aaKnown RBP14.58□□□□□ -0.07
PHGDH-233ENST00000642021 NKX1-2Q9UD57 310 aaPredicted RBP14.58□□□□□ -0.07
PHGDH-233ENST00000642021 TTC36A6NLP5 189 aa14.58□□□□□ -0.08
PHGDH-233ENST00000642021 MAFGO15525 162 aa14.58□□□□□ -0.08
PHGDH-233ENST00000642021 EDF1O60869 148 aaKnown RBP14.58□□□□□ -0.08
PHGDH-233ENST00000642021 ZNF132P52740 706 aa14.58□□□□□ -0.08
PHGDH-233ENST00000642021 NAA25Q14CX7 972 aa14.58□□□□□ -0.08
PHGDH-233ENST00000642021 PDK4Q16654 411 aa14.58□□□□□ -0.08
PHGDH-233ENST00000642021 MSS51Q4VC12 460 aa14.58□□□□□ -0.08
PHGDH-233ENST00000642021 SNRNP48Q6IEG0 339 aaKnown RBP14.58□□□□□ -0.08
PHGDH-233ENST00000642021 RSRC1Q96IZ7 334 aaKnown RBP14.58□□□□□ -0.08
PHGDH-233ENST00000642021 SMC6Q96SB8 1091 aa14.58□□□□□ -0.08
PHGDH-233ENST00000642021 UBN1Q9NPG3 1134 aa14.58□□□□□ -0.08
PHGDH-233ENST00000642021 DRG1Q9Y295 367 aaKnown RBP14.58□□□□□ -0.08
PHGDH-233ENST00000642021 NUMBLQ9Y6R0 609 aa14.58□□□□□ -0.08
PHGDH-233ENST00000642021 A0A0B4J269 797 aa14.57□□□□□ -0.08
PHGDH-233ENST00000642021 A0A1B0GUA9 196 aa14.57□□□□□ -0.08
PHGDH-233ENST00000642021 LRRD1A4D1F6 860 aa14.57□□□□□ -0.08
PHGDH-233ENST00000642021 HMGB2P26583 209 aaKnown RBP14.57□□□□□ -0.08
PHGDH-233ENST00000642021 SSTR1P30872 391 aa14.57□□□□□ -0.08
PHGDH-233ENST00000642021 TNFSF9P41273 254 aa14.57□□□□□ -0.08
PHGDH-233ENST00000642021 CDKN2BP42772 138 aa14.57□□□□□ -0.08
PHGDH-233ENST00000642021 VCPP55072 806 aaKnown RBP14.57□□□□□ -0.08
PHGDH-233ENST00000642021 GDF10P55107 478 aa14.57□□□□□ -0.08
PHGDH-233ENST00000642021 CXCL9Q07325 125 aa14.57□□□□□ -0.08
PHGDH-233ENST00000642021 MORF4L2Q15014 288 aa14.57□□□□□ -0.08
PHGDH-233ENST00000642021 FAM182AQ5T1J6 154 aa14.57□□□□□ -0.08
PHGDH-233ENST00000642021 ANKRD22Q5VYY1 191 aa14.57□□□□□ -0.08
PHGDH-233ENST00000642021 FBF1Q8TES7 1133 aa14.57□□□□□ -0.08
PHGDH-233ENST00000642021 LRRC37BQ96QE4 947 aa14.57□□□□□ -0.08
PHGDH-233ENST00000642021 CGRRF1Q99675 332 aa14.57□□□□□ -0.08
PHGDH-233ENST00000642021 USH1CQ9Y6N9 552 aa14.57□□□□□ -0.08
PHGDH-233ENST00000642021 CLUHO75153 1309 aa14.57□□□□□ -0.08
PHGDH-233ENST00000642021 SGK1O00141 431 aa14.57□□□□□ -0.08
PHGDH-233ENST00000642021 KIF1CO43896 1103 aaKnown RBP14.57□□□□□ -0.08
PHGDH-233ENST00000642021 KRT4P19013 534 aa14.57□□□□□ -0.08
PHGDH-233ENST00000642021 CETN2P41208 172 aa14.57□□□□□ -0.08
PHGDH-233ENST00000642021 DYNLT1P63172 113 aa14.57□□□□□ -0.08
PHGDH-233ENST00000642021 NR1H3Q13133 447 aa14.57□□□□□ -0.08
PHGDH-233ENST00000642021 PLEKHG4Q58EX7 1191 aa14.57□□□□□ -0.08
PHGDH-233ENST00000642021 XKR3Q5GH77 459 aa14.57□□□□□ -0.08
PHGDH-233ENST00000642021 CYP4A22Q5TCH4 519 aa14.57□□□□□ -0.08
PHGDH-233ENST00000642021 XRRA1Q6P2D8 792 aa14.57□□□□□ -0.08
PHGDH-233ENST00000642021 DCUN1D2Q6PH85 259 aa14.57□□□□□ -0.08
PHGDH-233ENST00000642021 RGS9BPQ6ZS82 235 aa14.57□□□□□ -0.08
PHGDH-233ENST00000642021 UBR7Q8N806 425 aa14.57□□□□□ -0.08
PHGDH-233ENST00000642021 NSUN6Q8TEA1 469 aaKnown RBP14.57□□□□□ -0.08
PHGDH-233ENST00000642021 SLC7A6OSQ96CW6 309 aaPredicted RBP14.57□□□□□ -0.08
PHGDH-233ENST00000642021 TTC25Q96NG3 672 aa14.57□□□□□ -0.08
PHGDH-233ENST00000642021 WDR83Q9BRX9 315 aaKnown RBP14.57□□□□□ -0.08
PHGDH-233ENST00000642021 ADGRA2Q96PE1 1338 aa14.57□□□□□ -0.08
PHGDH-233ENST00000642021 CBX6O95503 412 aa14.56□□□□□ -0.08
PHGDH-233ENST00000642021 GM2AP17900 193 aa14.56□□□□□ -0.08
PHGDH-233ENST00000642021 FSTL1Q12841 308 aa14.56□□□□□ -0.08
PHGDH-233ENST00000642021 TFDP1Q14186 410 aa14.56□□□□□ -0.08
PHGDH-233ENST00000642021 TFDP3Q5H9I0 405 aa14.56□□□□□ -0.08
PHGDH-233ENST00000642021 FNBP1LQ5T0N5 605 aa14.56□□□□□ -0.08
PHGDH-233ENST00000642021 OTOAQ7RTW8 1153 aa14.56□□□□□ -0.08
PHGDH-233ENST00000642021 MAB21L3Q8N8X9 362 aa14.56□□□□□ -0.08
PHGDH-233ENST00000642021 REPS2Q8NFH8 660 aa14.56□□□□□ -0.08
PHGDH-233ENST00000642021 DEPTORQ8TB45 409 aa14.56□□□□□ -0.08
PHGDH-233ENST00000642021 KCNV2Q8TDN2 545 aa14.56□□□□□ -0.08
PHGDH-233ENST00000642021 C10orf82Q8WW14 230 aa14.56□□□□□ -0.08
PHGDH-233ENST00000642021 PORCNQ9H237 461 aa14.56□□□□□ -0.08
PHGDH-233ENST00000642021 MYOZ2Q9NPC6 264 aa14.56□□□□□ -0.08
PHGDH-233ENST00000642021 SLC5A4Q9NY91 659 aa14.56□□□□□ -0.08
PHGDH-233ENST00000642021 TJP2Q9UDY2 1190 aa14.56□□□□□ -0.08
PHGDH-233ENST00000642021 DOCK5Q9H7D0 1870 aa14.56□□□□□ -0.08
PHGDH-233ENST00000642021 DKC1O60832 514 aaKnown RBP eCLIP14.56□□□□□ -0.081e-16■■■■■ 39.7
PHGDH-233ENST00000642021 TBXAS1P24557 533 aaPredicted RBP14.56□□□□□ -0.08
PHGDH-233ENST00000642021 SLC18A1P54219 525 aa14.56□□□□□ -0.08
PHGDH-233ENST00000642021 LACTBP83111 547 aaPredicted RBP14.56□□□□□ -0.08
PHGDH-233ENST00000642021 ATP11AP98196 1134 aa14.56□□□□□ -0.08
PHGDH-233ENST00000642021 CRYMQ14894 314 aa14.56□□□□□ -0.08
PHGDH-233ENST00000642021 SETDB1Q15047 1291 aa14.56□□□□□ -0.08
PHGDH-233ENST00000642021 SMTNL2Q2TAL5 461 aa14.56□□□□□ -0.08
PHGDH-233ENST00000642021 KCNT1Q5JUK3 1230 aa14.56□□□□□ -0.08
PHGDH-233ENST00000642021 PPP1R15BQ5SWA1 713 aa14.56□□□□□ -0.08
PHGDH-233ENST00000642021 DNAJC24Q6P3W2 148 aa14.56□□□□□ -0.08
PHGDH-233ENST00000642021 ZNF449Q6P9G9 518 aa14.56□□□□□ -0.08
PHGDH-233ENST00000642021 LVRNQ6Q4G3 990 aa14.56□□□□□ -0.08
PHGDH-233ENST00000642021 ARFGAP1Q8N6T3 406 aa14.56□□□□□ -0.08
PHGDH-233ENST00000642021 AGBL3Q8NEM8 1001 aa14.56□□□□□ -0.08
PHGDH-233ENST00000642021 LRRC8CQ8TDW0 803 aa14.56□□□□□ -0.08
PHGDH-233ENST00000642021 TFAP2BQ92481 460 aa14.56□□□□□ -0.08
PHGDH-233ENST00000642021 NKD2Q969F2 451 aaPredicted RBP14.56□□□□□ -0.08
PHGDH-233ENST00000642021 LRMDAQ9H2I8 198 aa14.56□□□□□ -0.08
PHGDH-233ENST00000642021 RABGEF1Q9UJ41 708 aa14.56□□□□□ -0.08
PHGDH-233ENST00000642021 FZD1Q9UP38 647 aa14.56□□□□□ -0.08
PHGDH-233ENST00000642021 SMG5Q9UPR3 1016 aaKnown RBP14.56□□□□□ -0.08
PHGDH-233ENST00000642021 CCDC189A1A4V9 331 aa14.56□□□□□ -0.08
PHGDH-233ENST00000642021 WDR91A4D1P6 747 aa14.56□□□□□ -0.08
PHGDH-233ENST00000642021 C3orf70A6NLC5 250 aaPredicted RBP14.56□□□□□ -0.08
PHGDH-233ENST00000642021 H0YCG3 227 aa14.56□□□□□ -0.08
PHGDH-233ENST00000642021 PIGRP01833 764 aa14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms