RNA–Protein interactions for RNA: ENST00000640091.1

NECAP1-223, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 2

Gene NECAP1, Length 2,115 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-223ENST00000640091 GRIK3Q13003 919 aa11.12□□□□□ -0.63
NECAP1-223ENST00000640091 TUSC3Q13454 348 aa11.12□□□□□ -0.63
NECAP1-223ENST00000640091 TIGD5Q53EQ6 642 aa11.12□□□□□ -0.63
NECAP1-223ENST00000640091 NOMO2Q5JPE7 1267 aa11.12□□□□□ -0.63
NECAP1-223ENST00000640091 DSTYKQ6XUX3 929 aa11.12□□□□□ -0.63
NECAP1-223ENST00000640091 MMS22LQ6ZRQ5 1243 aa11.12□□□□□ -0.63
NECAP1-223ENST00000640091 TPCN2Q8NHX9 752 aa11.12□□□□□ -0.63
NECAP1-223ENST00000640091 RFFLQ8WZ73 363 aa11.12□□□□□ -0.63
NECAP1-223ENST00000640091 PSMB7Q99436 277 aa11.12□□□□□ -0.63
NECAP1-223ENST00000640091 FAM49BQ9NUQ9 324 aa11.12□□□□□ -0.63
NECAP1-223ENST00000640091 TMEM161AQ9NX61 479 aa11.12□□□□□ -0.63
NECAP1-223ENST00000640091 CNOT8Q9UFF9 292 aaKnown RBP11.12□□□□□ -0.63
NECAP1-223ENST00000640091 HYOU1Q9Y4L1 999 aa11.12□□□□□ -0.63
NECAP1-223ENST00000640091 A0A0A6YYK5 440 aaPredicted RBP11.11□□□□□ -0.63
NECAP1-223ENST00000640091 TRIM43BA6NCK2 446 aa11.11□□□□□ -0.63
NECAP1-223ENST00000640091 ATP2C2O75185 946 aa11.11□□□□□ -0.63
NECAP1-223ENST00000640091 UPP2O95045 317 aa11.11□□□□□ -0.63
NECAP1-223ENST00000640091 CXCL10P02778 98 aa11.11□□□□□ -0.63
NECAP1-223ENST00000640091 VDRP11473 427 aa11.11□□□□□ -0.63
NECAP1-223ENST00000640091 ACAT1P24752 427 aaKnown RBP11.11□□□□□ -0.63
NECAP1-223ENST00000640091 RNASELQ05823 741 aaKnown RBP11.11□□□□□ -0.63
NECAP1-223ENST00000640091 SGO2Q562F6 1265 aa11.11□□□□□ -0.63
NECAP1-223ENST00000640091 PPP1R26Q5T8A7 1209 aaPredicted RBP11.11□□□□□ -0.63
NECAP1-223ENST00000640091 LIN28BQ6ZN17 250 aaKnown RBP eCLIP11.11□□□□□ -0.63
NECAP1-223ENST00000640091 OSTM1Q86WC4 334 aa11.11□□□□□ -0.63
NECAP1-223ENST00000640091 ADGRF2Q8IZF7 708 aa11.11□□□□□ -0.63
NECAP1-223ENST00000640091 APBB2Q92870 758 aa11.11□□□□□ -0.63
NECAP1-223ENST00000640091 TRIM43Q96BQ3 446 aaPredicted RBP11.11□□□□□ -0.63
NECAP1-223ENST00000640091 VWCEQ96DN2 955 aa11.11□□□□□ -0.63
NECAP1-223ENST00000640091 BTBD6Q96KE9 485 aa11.11□□□□□ -0.63
NECAP1-223ENST00000640091 SNX25Q9H3E2 840 aa11.11□□□□□ -0.63
NECAP1-223ENST00000640091 TBC1D13Q9NVG8 400 aa11.11□□□□□ -0.63
NECAP1-223ENST00000640091 ADAM22Q9P0K1 906 aa11.11□□□□□ -0.63
NECAP1-223ENST00000640091 DNAJB4Q9UDY4 337 aa11.11□□□□□ -0.63
NECAP1-223ENST00000640091 CYTH4Q9UIA0 394 aa11.11□□□□□ -0.63
NECAP1-223ENST00000640091 LRFN2Q9ULH4 789 aa11.11□□□□□ -0.63
NECAP1-223ENST00000640091 PCDHGC3Q9UN70 934 aa11.11□□□□□ -0.63
NECAP1-223ENST00000640091 STXBP5LQ9Y2K9 1186 aa11.11□□□□□ -0.63
NECAP1-223ENST00000640091 JRKLQ9Y4A0 524 aa11.11□□□□□ -0.63
NECAP1-223ENST00000640091 PCDHGC5Q9Y5F6 944 aa11.11□□□□□ -0.63
NECAP1-223ENST00000640091 SCN5AQ14524 2016 aa11.11□□□□□ -0.63
NECAP1-223ENST00000640091 O00370 1275 aa11.11□□□□□ -0.63
NECAP1-223ENST00000640091 MED7O43513 233 aa11.11□□□□□ -0.63
NECAP1-223ENST00000640091 BUB1BO60566 1050 aaPredicted RBP11.11□□□□□ -0.63
NECAP1-223ENST00000640091 MICAL2O94851 1124 aa11.11□□□□□ -0.63
NECAP1-223ENST00000640091 CNGA2Q16280 664 aa11.11□□□□□ -0.63
NECAP1-223ENST00000640091 CCDC142Q17RM4 750 aa11.11□□□□□ -0.63
NECAP1-223ENST00000640091 CD300LGQ6UXG3 332 aa11.11□□□□□ -0.63
NECAP1-223ENST00000640091 TRIM72Q6ZMU5 477 aa11.11□□□□□ -0.63
NECAP1-223ENST00000640091 MON1BQ7L1V2 547 aa11.11□□□□□ -0.63
NECAP1-223ENST00000640091 LIMS2Q7Z4I7 341 aa11.11□□□□□ -0.63
NECAP1-223ENST00000640091 DAAM2Q86T65 1068 aa11.11□□□□□ -0.63
NECAP1-223ENST00000640091 ABI1Q8IZP0 508 aa11.11□□□□□ -0.63
NECAP1-223ENST00000640091 TTC39CQ8N584 583 aa11.11□□□□□ -0.63
NECAP1-223ENST00000640091 TOP6BLQ8N6T0 577 aa11.11□□□□□ -0.63
NECAP1-223ENST00000640091 TMEM35BQ8NCS4 154 aa11.11□□□□□ -0.63
NECAP1-223ENST00000640091 NUP85Q9BW27 656 aa11.11□□□□□ -0.63
NECAP1-223ENST00000640091 HCSTQ9UBK5 93 aa11.11□□□□□ -0.63
NECAP1-223ENST00000640091 TJP2Q9UDY2 1190 aa11.11□□□□□ -0.63
NECAP1-223ENST00000640091 TSPAN16Q9UKR8 245 aa11.11□□□□□ -0.63
NECAP1-223ENST00000640091 WDR3Q9UNX4 943 aaKnown RBP eCLIP11.11□□□□□ -0.63
NECAP1-223ENST00000640091 PDCD11Q14690 1871 aaKnown RBP11.1□□□□□ -0.63
NECAP1-223ENST00000640091 M0QYV0 167 aa11.1□□□□□ -0.63
NECAP1-223ENST00000640091 GJB6O95452 261 aa11.1□□□□□ -0.63
NECAP1-223ENST00000640091 CYP1A2P05177 515 aa11.1□□□□□ -0.63
NECAP1-223ENST00000640091 CSF2RAP15509 400 aa11.1□□□□□ -0.63
NECAP1-223ENST00000640091 CXCR5P32302 372 aa11.1□□□□□ -0.63
NECAP1-223ENST00000640091 PSMC1P62191 440 aaKnown RBP11.1□□□□□ -0.63
NECAP1-223ENST00000640091 UNC93AQ86WB7 457 aa11.1□□□□□ -0.63
NECAP1-223ENST00000640091 RHOT2Q8IXI1 618 aa11.1□□□□□ -0.63
NECAP1-223ENST00000640091 LRRC57Q8N9N7 239 aa11.1□□□□□ -0.63
NECAP1-223ENST00000640091 DDX27Q96GQ7 796 aaKnown RBP11.1□□□□□ -0.63
NECAP1-223ENST00000640091 TRIM7Q9C029 511 aa11.1□□□□□ -0.63
NECAP1-223ENST00000640091 GTF3C4Q9UKN8 822 aa11.1□□□□□ -0.63
NECAP1-223ENST00000640091 NCANO14594 1321 aa11.1□□□□□ -0.63
NECAP1-223ENST00000640091 TMEM110-MUSTN1A8MSY1 372 aa11.09□□□□□ -0.63
NECAP1-223ENST00000640091 PIK3R2O00459 728 aa11.09□□□□□ -0.63
NECAP1-223ENST00000640091 ZNF185O15231 689 aa11.09□□□□□ -0.63
NECAP1-223ENST00000640091 INPPL1O15357 1258 aa11.09□□□□□ -0.63
NECAP1-223ENST00000640091 KIF4AO95239 1232 aa11.09□□□□□ -0.63
NECAP1-223ENST00000640091 LSM8O95777 96 aaKnown RBP11.09□□□□□ -0.63
NECAP1-223ENST00000640091 CCDC130P13994 396 aa11.09□□□□□ -0.63
NECAP1-223ENST00000640091 MMP8P22894 467 aa11.09□□□□□ -0.63
NECAP1-223ENST00000640091 GPD2P43304 727 aa11.09□□□□□ -0.63
NECAP1-223ENST00000640091 OR1G1P47890 313 aa11.09□□□□□ -0.63
NECAP1-223ENST00000640091 PTP4A2Q12974 167 aa11.09□□□□□ -0.63
NECAP1-223ENST00000640091 IFI16Q16666 785 aaKnown RBP11.09□□□□□ -0.63
NECAP1-223ENST00000640091 CYP4A22Q5TCH4 519 aa11.09□□□□□ -0.63
NECAP1-223ENST00000640091 KIAA0319Q5VV43 1072 aa11.09□□□□□ -0.63
NECAP1-223ENST00000640091 DCLRE1AQ6PJP8 1040 aa11.09□□□□□ -0.63
NECAP1-223ENST00000640091 TMCO2Q7Z6W1 182 aaPredicted RBP11.09□□□□□ -0.63
NECAP1-223ENST00000640091 ERICH1Q86X53 443 aa11.09□□□□□ -0.63
NECAP1-223ENST00000640091 PHF13Q86YI8 300 aaPredicted RBP11.09□□□□□ -0.63
NECAP1-223ENST00000640091 COLGALT2Q8IYK4 626 aa11.09□□□□□ -0.63
NECAP1-223ENST00000640091 CRIPAKQ8N1N5 446 aa11.09□□□□□ -0.63
NECAP1-223ENST00000640091 ZNF564Q8TBZ8 553 aaPredicted RBP11.09□□□□□ -0.63
NECAP1-223ENST00000640091 URGCPQ8TCY9 931 aa11.09□□□□□ -0.63
NECAP1-223ENST00000640091 CASD1Q96PB1 797 aa11.09□□□□□ -0.63
NECAP1-223ENST00000640091 FAM193BQ96PV7 902 aaPredicted RBP11.09□□□□□ -0.63
NECAP1-223ENST00000640091 TLR10Q9BXR5 811 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms