RNA–Protein interactions for RNA: ENST00000639841.1

NECAP1-220, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 1,982 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-220ENST00000639841 TRIM25Q14258 630 aaKnown RBP8.06□□□□□ -1.12
NECAP1-220ENST00000639841 C3orf38Q5JPI3 329 aa8.06□□□□□ -1.12
NECAP1-220ENST00000639841 ELMSAN1Q6PJG2 1045 aa8.06□□□□□ -1.12
NECAP1-220ENST00000639841 TMTC3Q6ZXV5 915 aa8.06□□□□□ -1.12
NECAP1-220ENST00000639841 ZFPM1Q8IX07 1006 aa8.06□□□□□ -1.12
NECAP1-220ENST00000639841 DLG3Q92796 817 aa8.06□□□□□ -1.12
NECAP1-220ENST00000639841 COG8Q96MW5 612 aa8.06□□□□□ -1.12
NECAP1-220ENST00000639841 EYA3Q99504 573 aa8.06□□□□□ -1.12
NECAP1-220ENST00000639841 GPR63Q9BZJ6 419 aa8.06□□□□□ -1.12
NECAP1-220ENST00000639841 SAYSD1Q9NPB0 183 aa8.06□□□□□ -1.12
NECAP1-220ENST00000639841 PIH1D1Q9NWS0 290 aaKnown RBP8.06□□□□□ -1.12
NECAP1-220ENST00000639841 PKD2L1Q9P0L9 805 aa8.06□□□□□ -1.12
NECAP1-220ENST00000639841 IQCJ-SCHIP1C9J366 451 aaPredicted RBP8.05□□□□□ -1.12
NECAP1-220ENST00000639841 F8W031 263 aaPredicted RBP8.05□□□□□ -1.12
NECAP1-220ENST00000639841 INO80B-WBP1J3KQ70 363 aa8.05□□□□□ -1.12
NECAP1-220ENST00000639841 PODXLO00592 558 aa8.05□□□□□ -1.12
NECAP1-220ENST00000639841 TM4SF5O14894 197 aa8.05□□□□□ -1.12
NECAP1-220ENST00000639841 NTSR2O95665 410 aa8.05□□□□□ -1.12
NECAP1-220ENST00000639841 CYP17A1P05093 508 aa8.05□□□□□ -1.12
NECAP1-220ENST00000639841 CST5P28325 142 aaPredicted RBP8.05□□□□□ -1.12
NECAP1-220ENST00000639841 HNF4AP41235 474 aa8.05□□□□□ -1.12
NECAP1-220ENST00000639841 WASP42768 502 aa8.05□□□□□ -1.12
NECAP1-220ENST00000639841 HK3P52790 923 aa8.05□□□□□ -1.12
NECAP1-220ENST00000639841 MRPS35P82673 323 aaKnown RBP8.05□□□□□ -1.12
NECAP1-220ENST00000639841 POU4F1Q01851 419 aa8.05□□□□□ -1.12
NECAP1-220ENST00000639841 PLS1Q14651 629 aa8.05□□□□□ -1.12
NECAP1-220ENST00000639841 WTAPQ15007 396 aa8.05□□□□□ -1.12
NECAP1-220ENST00000639841 SETMARQ53H47 684 aaPredicted RBP8.05□□□□□ -1.12
NECAP1-220ENST00000639841 CST9Q5W186 159 aa8.05□□□□□ -1.12
NECAP1-220ENST00000639841 BORAQ6PGQ7 559 aa8.05□□□□□ -1.12
NECAP1-220ENST00000639841 CNSTQ6PJW8 725 aa8.05□□□□□ -1.12
NECAP1-220ENST00000639841 OR8H3Q8N146 312 aa8.05□□□□□ -1.12
NECAP1-220ENST00000639841 TOR1AIP2Q8NFQ8 470 aa8.05□□□□□ -1.12
NECAP1-220ENST00000639841 TM7SF3Q9NS93 570 aa8.05□□□□□ -1.12
NECAP1-220ENST00000639841 CRIM1Q9NZV1 1036 aa8.05□□□□□ -1.12
NECAP1-220ENST00000639841 SLC6A14Q9UN76 642 aa8.05□□□□□ -1.12
NECAP1-220ENST00000639841 AKAP11Q9UKA4 1901 aa8.05□□□□□ -1.12
NECAP1-220ENST00000639841 LOC100289279A0A1B0GTE1 492 aa8.04□□□□□ -1.12
NECAP1-220ENST00000639841 RNF225M0QZC1 329 aaPredicted RBP8.04□□□□□ -1.12
NECAP1-220ENST00000639841 MEIS1O00470 390 aa8.04□□□□□ -1.12
NECAP1-220ENST00000639841 UBE2CO00762 179 aa8.04□□□□□ -1.12
NECAP1-220ENST00000639841 SCDO00767 359 aa8.04□□□□□ -1.12
NECAP1-220ENST00000639841 NDST3O95803 873 aa8.04□□□□□ -1.12
NECAP1-220ENST00000639841 DESP17661 470 aa8.04□□□□□ -1.12
NECAP1-220ENST00000639841 GMPSP49915 693 aaPredicted RBP8.04□□□□□ -1.12
NECAP1-220ENST00000639841 SLC12A2P55011 1212 aa8.04□□□□□ -1.12
NECAP1-220ENST00000639841 UBXN2AP68543 259 aa8.04□□□□□ -1.12
NECAP1-220ENST00000639841 CDK17Q00537 523 aa8.04□□□□□ -1.12
NECAP1-220ENST00000639841 KRTCAP3Q53RY4 240 aa8.04□□□□□ -1.12
NECAP1-220ENST00000639841 RGMBQ6NW40 437 aa8.04□□□□□ -1.12
NECAP1-220ENST00000639841 ARHGAP36Q6ZRI8 547 aa8.04□□□□□ -1.12
NECAP1-220ENST00000639841 ZNF619Q8N2I2 560 aa8.04□□□□□ -1.12
NECAP1-220ENST00000639841 GOLGA6L2Q8N9W4 650 aaPredicted RBP8.04□□□□□ -1.12
NECAP1-220ENST00000639841 SH3RF2Q8TEC5 729 aa8.04□□□□□ -1.12
NECAP1-220ENST00000639841 AFG1LQ8WV93 481 aa8.04□□□□□ -1.12
NECAP1-220ENST00000639841 RSAD2Q8WXG1 361 aa8.04□□□□□ -1.12
NECAP1-220ENST00000639841 FCRL3Q96P31 734 aaPredicted RBP8.04□□□□□ -1.12
NECAP1-220ENST00000639841 EDEM3Q9BZQ6 932 aa8.04□□□□□ -1.12
NECAP1-220ENST00000639841 RNPEPQ9H4A4 650 aa8.04□□□□□ -1.12
NECAP1-220ENST00000639841 CCDC196A0A1B0GTZ2 297 aa8.04□□□□□ -1.12
NECAP1-220ENST00000639841 MAN2B1O00754 1011 aa8.04□□□□□ -1.12
NECAP1-220ENST00000639841 C2CD2LO14523 706 aa8.04□□□□□ -1.12
NECAP1-220ENST00000639841 LRRN2O75325 713 aa8.04□□□□□ -1.12
NECAP1-220ENST00000639841 UPP2O95045 317 aa8.04□□□□□ -1.12
NECAP1-220ENST00000639841 LGALS4P56470 323 aa8.04□□□□□ -1.12
NECAP1-220ENST00000639841 HNRNPUQ00839 825 aaKnown RBP eCLIP8.04□□□□□ -1.12
NECAP1-220ENST00000639841 UBXN1Q04323 297 aa8.04□□□□□ -1.12
NECAP1-220ENST00000639841 CXCL9Q07325 125 aa8.04□□□□□ -1.12
NECAP1-220ENST00000639841 ADAM15Q13444 863 aa8.04□□□□□ -1.12
NECAP1-220ENST00000639841 SLC12A1Q13621 1099 aa8.04□□□□□ -1.12
NECAP1-220ENST00000639841 TARBP2Q15633 366 aaKnown RBP8.04□□□□□ -1.12
NECAP1-220ENST00000639841 GPR19Q15760 415 aa8.04□□□□□ -1.12
NECAP1-220ENST00000639841 HLFQ16534 295 aa8.04□□□□□ -1.12
NECAP1-220ENST00000639841 ARHGAP15Q53QZ3 475 aa8.04□□□□□ -1.12
NECAP1-220ENST00000639841 ALKBH5Q6P6C2 394 aaKnown RBP8.04□□□□□ -1.12
NECAP1-220ENST00000639841 TSPYL5Q86VY4 417 aaPredicted RBP8.04□□□□□ -1.12
NECAP1-220ENST00000639841 NLRP14Q86W24 1093 aa8.04□□□□□ -1.12
NECAP1-220ENST00000639841 KCNG4Q8TDN1 519 aa8.04□□□□□ -1.12
NECAP1-220ENST00000639841 DCPSQ96C86 337 aaKnown RBP8.04□□□□□ -1.12
NECAP1-220ENST00000639841 EID2BQ96D98 161 aa8.04□□□□□ -1.12
NECAP1-220ENST00000639841 ASIC4Q96FT7 647 aa8.04□□□□□ -1.12
NECAP1-220ENST00000639841 TWNKQ96RR1 684 aa8.04□□□□□ -1.12
NECAP1-220ENST00000639841 JAM3Q9BX67 310 aa8.04□□□□□ -1.12
NECAP1-220ENST00000639841 ADAM7Q9H2U9 754 aa8.04□□□□□ -1.12
NECAP1-220ENST00000639841 CFAP20Q9Y6A4 193 aaKnown RBP8.04□□□□□ -1.12
NECAP1-220ENST00000639841 COL4A5P29400 1685 aa8.03□□□□□ -1.12
NECAP1-220ENST00000639841 MAPK8IP3Q9UPT6 1336 aa8.03□□□□□ -1.12
NECAP1-220ENST00000639841 LAMB2P55268 1798 aa8.03□□□□□ -1.12
NECAP1-220ENST00000639841 AGAP14A8MT82 685 aa8.03□□□□□ -1.12
NECAP1-220ENST00000639841 PIP5K1BO14986 540 aa8.03□□□□□ -1.12
NECAP1-220ENST00000639841 KCNQ3O43525 872 aa8.03□□□□□ -1.12
NECAP1-220ENST00000639841 THEGLP0DJG4 465 aa8.03□□□□□ -1.12
NECAP1-220ENST00000639841 NR2F1P10589 423 aa8.03□□□□□ -1.12
NECAP1-220ENST00000639841 BCRP11274 1271 aa8.03□□□□□ -1.12
NECAP1-220ENST00000639841 MLH1P40692 756 aa8.03□□□□□ -1.12
NECAP1-220ENST00000639841 HUNKP57058 714 aa8.03□□□□□ -1.12
NECAP1-220ENST00000639841 CREB5Q02930 508 aa8.03□□□□□ -1.12
NECAP1-220ENST00000639841 GRAPQ13588 217 aa8.03□□□□□ -1.12
NECAP1-220ENST00000639841 MAP3K21Q5TCX8 1036 aa8.03□□□□□ -1.12
NECAP1-220ENST00000639841 TRIM68Q6AZZ1 485 aa8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms