RNA–Protein interactions for RNA: ENST00000639300.1

SCARB2-216, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 4,554 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-216ENST00000639300 KIAA1683Q9H0B3 1180 aa15.1■□□□□ 0.01
SCARB2-216ENST00000639300 PCDHGC5Q9Y5F6 944 aa15.1■□□□□ 0.01
SCARB2-216ENST00000639300 NPTXRO95502 500 aa15.1■□□□□ 0.01
SCARB2-216ENST00000639300 RABGAP1LQ5R372 815 aa15.1■□□□□ 0.01
SCARB2-216ENST00000639300 ITPRIPL1Q6GPH6 555 aa15.1■□□□□ 0.01
SCARB2-216ENST00000639300 ACAD11Q709F0 780 aa15.1■□□□□ 0.01
SCARB2-216ENST00000639300 ACTL9Q8TC94 416 aa15.1■□□□□ 0.01
SCARB2-216ENST00000639300 AENQ8WTP8 325 aaKnown RBP15.1■□□□□ 0.01
SCARB2-216ENST00000639300 WDR18Q9BV38 432 aa15.1■□□□□ 0.01
SCARB2-216ENST00000639300 WWP1Q9H0M0 922 aa15.1■□□□□ 0.01
SCARB2-216ENST00000639300 VWA5AO00534 786 aa15.1■□□□□ 0.01
SCARB2-216ENST00000639300 XPAP23025 273 aaPredicted RBP15.1■□□□□ 0.01
SCARB2-216ENST00000639300 RAP1GAPP47736 663 aa15.1■□□□□ 0.01
SCARB2-216ENST00000639300 KIZQ2M2Z5 673 aa15.1■□□□□ 0.01
SCARB2-216ENST00000639300 SLC26A7Q8TE54 656 aa15.1■□□□□ 0.01
SCARB2-216ENST00000639300 KIF9Q9HAQ2 790 aa15.1■□□□□ 0.01
SCARB2-216ENST00000639300 WDR3Q9UNX4 943 aaKnown RBP eCLIP15.1■□□□□ 0.01
SCARB2-216ENST00000639300 TAC1P20366 129 aa15.09■□□□□ 0.01
SCARB2-216ENST00000639300 ELF1P32519 619 aa15.09■□□□□ 0.01
SCARB2-216ENST00000639300 PAPOLAP51003 745 aaKnown RBP15.09■□□□□ 0.01
SCARB2-216ENST00000639300 DEUP1Q05D60 604 aa15.09■□□□□ 0.01
SCARB2-216ENST00000639300 STX3Q13277 289 aa15.09■□□□□ 0.01
SCARB2-216ENST00000639300 SNAPC2Q13487 334 aa15.09■□□□□ 0.01
SCARB2-216ENST00000639300 KRT80Q6KB66 452 aa15.09■□□□□ 0.01
SCARB2-216ENST00000639300 PPIL6Q8IXY8 311 aa15.09■□□□□ 0.01
SCARB2-216ENST00000639300 LRRC43Q8N309 656 aa15.09■□□□□ 0.01
SCARB2-216ENST00000639300 EPAS1Q99814 870 aa15.09■□□□□ 0.01
SCARB2-216ENST00000639300 TRIM4Q9C037 500 aa15.09■□□□□ 0.01
SCARB2-216ENST00000639300 SARS2Q9NP81 518 aaKnown RBP15.09■□□□□ 0.01
SCARB2-216ENST00000639300 SEC23IPQ9Y6Y8 1000 aaKnown RBP15.09■□□□□ 0.01
SCARB2-216ENST00000639300 ATRNO75882 1429 aa15.09■□□□□ 0.01
SCARB2-216ENST00000639300 GOLGA8CPA6NN73 597 aa15.09■□□□□ 0.01
SCARB2-216ENST00000639300 TRIM49D1C9J1S8 452 aa15.09■□□□□ 0.01
SCARB2-216ENST00000639300 VTNP04004 478 aa15.09■□□□□ 0.01
SCARB2-216ENST00000639300 HSD17B4P51659 736 aa15.09■□□□□ 0.01
SCARB2-216ENST00000639300 RGS9BPQ6ZS82 235 aa15.09■□□□□ 0.01
SCARB2-216ENST00000639300 C15orf52Q6ZUT6 534 aaKnown RBP15.09■□□□□ 0.01
SCARB2-216ENST00000639300 MCOLN2Q8IZK6 566 aa15.09■□□□□ 0.01
SCARB2-216ENST00000639300 SLC40A1Q9NP59 571 aa15.09■□□□□ 0.01
SCARB2-216ENST00000639300 ZC3H11AO75152 810 aaKnown RBP eCLIP15.09■□□□□ 0.01
SCARB2-216ENST00000639300 PSMD10O75832 226 aa15.09■□□□□ 0.01
SCARB2-216ENST00000639300 CPA2P48052 419 aa15.09■□□□□ 0.01
SCARB2-216ENST00000639300 CLEC16AQ2KHT3 1053 aa15.09■□□□□ 0.01
SCARB2-216ENST00000639300 ALKBH8Q96BT7 664 aaKnown RBP15.09■□□□□ 0.01
SCARB2-216ENST00000639300 SDCCAG3Q96C92 435 aa15.09■□□□□ 0.01
SCARB2-216ENST00000639300 FAM84AQ96KN4 292 aa15.09■□□□□ 0.01
SCARB2-216ENST00000639300 SNRPAP09012 282 aaKnown RBP15.09■□□□□ 0.01
SCARB2-216ENST00000639300 RPL21P46778 160 aaKnown RBP15.09■□□□□ 0.01
SCARB2-216ENST00000639300 NSUN2Q08J23 767 aaKnown RBP eCLIP15.09■□□□□ 0.01
SCARB2-216ENST00000639300 BOLA3Q53S33 107 aa15.09■□□□□ 0.01
SCARB2-216ENST00000639300 TMTC4Q5T4D3 741 aa15.09■□□□□ 0.01
SCARB2-216ENST00000639300 ABRAQ8N0Z2 381 aa15.09■□□□□ 0.01
SCARB2-216ENST00000639300 GPRC5AQ8NFJ5 357 aa15.09■□□□□ 0.01
SCARB2-216ENST00000639300 TRAPPC12Q8WVT3 735 aa15.09■□□□□ 0.01
SCARB2-216ENST00000639300 SCG3Q8WXD2 468 aaKnown RBP15.09■□□□□ 0.01
SCARB2-216ENST00000639300 CGRRF1Q99675 332 aa15.09■□□□□ 0.01
SCARB2-216ENST00000639300 PLEKHA5Q9HAU0 1116 aa15.09■□□□□ 0.01
SCARB2-216ENST00000639300 MAP3K20Q9NYL2 800 aaKnown RBP15.09■□□□□ 0.01
SCARB2-216ENST00000639300 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP15.09■□□□□ 0.014e-7■■□□□ 14.5
SCARB2-216ENST00000639300 TSR3Q9UJK0 312 aaKnown RBP15.09■□□□□ 0.01
SCARB2-216ENST00000639300 CCDC22O60826 627 aa15.08■□□□□ 0.01
SCARB2-216ENST00000639300 SPATA31C1P0DKV0 1188 aa15.08■□□□□ 0.01
SCARB2-216ENST00000639300 CXCL8P10145 99 aa15.08■□□□□ 0.01
SCARB2-216ENST00000639300 HNRNPH1P31943 449 aaKnown RBP15.08■□□□□ 0.01
SCARB2-216ENST00000639300 GNL1P36915 607 aaPredicted RBP15.08■□□□□ 0.01
SCARB2-216ENST00000639300 YWHAHQ04917 246 aaPredicted RBP15.08■□□□□ 0.01
SCARB2-216ENST00000639300 TAF1CQ15572 869 aaPredicted RBP15.08■□□□□ 0.01
SCARB2-216ENST00000639300 TFDP3Q5H9I0 405 aa15.08■□□□□ 0.01
SCARB2-216ENST00000639300 CDC26Q8NHZ8 85 aa15.08■□□□□ 0.01
SCARB2-216ENST00000639300 TBRG4Q969Z0 631 aaKnown RBP eCLIP15.08■□□□□ 0.012e-7■■■■■ 62.8
SCARB2-216ENST00000639300 RMDN2Q96LZ7 410 aa15.08■□□□□ 0.01
SCARB2-216ENST00000639300 RANBP17Q9H2T7 1088 aaKnown RBP15.08■□□□□ 0.01
SCARB2-216ENST00000639300 IGF2BP3O00425 579 aaKnown RBP eCLIP15.08■□□□□ 0
SCARB2-216ENST00000639300 NEMP1O14524 444 aa15.08■□□□□ 0
SCARB2-216ENST00000639300 PSTPIP1O43586 416 aa15.08■□□□□ 0
SCARB2-216ENST00000639300 IFI35P80217 286 aaPredicted RBP15.08■□□□□ 0
SCARB2-216ENST00000639300 LY6KQ17RY6 165 aa15.08■□□□□ 0
SCARB2-216ENST00000639300 TMC3Q7Z5M5 1100 aa15.08■□□□□ 0
SCARB2-216ENST00000639300 SLC7A14Q8TBB6 771 aa15.08■□□□□ 0
SCARB2-216ENST00000639300 SLC16A10Q8TF71 515 aa15.08■□□□□ 0
SCARB2-216ENST00000639300 IFT43Q96FT9 208 aa15.08■□□□□ 0
SCARB2-216ENST00000639300 HSD3B7Q9H2F3 369 aa15.08■□□□□ 0
SCARB2-216ENST00000639300 DONSONQ9NYP3 566 aa15.08■□□□□ 0
SCARB2-216ENST00000639300 ADA2Q9NZK5 511 aa15.08■□□□□ 0
SCARB2-216ENST00000639300 ANKRD26Q9UPS8 1709 aa15.08■□□□□ 0
SCARB2-216ENST00000639300 CCL15-CCL14A0A0B4J2E2 113 aa15.08■□□□□ 0
SCARB2-216ENST00000639300 KDM4FA0A1W2PPD8 638 aa15.08■□□□□ 0
SCARB2-216ENST00000639300 PPP1R11O60927 126 aaPredicted RBP15.08■□□□□ 0
SCARB2-216ENST00000639300 LMNAP02545 664 aaKnown RBP15.08■□□□□ 0
SCARB2-216ENST00000639300 RFC1P35251 1148 aaPredicted RBP15.08■□□□□ 0
SCARB2-216ENST00000639300 ZNF844Q08AG5 666 aa15.08■□□□□ 0
SCARB2-216ENST00000639300 CCL15Q16663 113 aa15.08■□□□□ 0
SCARB2-216ENST00000639300 LRRC6Q86X45 466 aa15.08■□□□□ 0
SCARB2-216ENST00000639300 IL31RAQ8NI17 732 aa15.08■□□□□ 0
SCARB2-216ENST00000639300 TTC8Q8TAM2 541 aa15.08■□□□□ 0
SCARB2-216ENST00000639300 FAM111AQ96PZ2 611 aa15.08■□□□□ 0
SCARB2-216ENST00000639300 POLIQ9UNA4 740 aa15.08■□□□□ 0
SCARB2-216ENST00000639300 ASTN1O14525 1302 aa15.08■□□□□ 0
SCARB2-216ENST00000639300 DLG5Q8TDM6 1919 aa15.08■□□□□ 0
SCARB2-216ENST00000639300 A0A087WZ62 844 aa15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms