RNA–Protein interactions for RNA: ENST00000639290.1

CCDC7-213, Transcript of coiled-coil domain containing 7, humanhuman

TSL 1 (best)

Gene CCDC7, Length 2,542 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-213ENST00000639290 MRPL10Q7Z7H8 261 aaKnown RBP3.93□□□□□ -1.78
CCDC7-213ENST00000639290 RAB11FIP4Q86YS3 637 aa3.93□□□□□ -1.78
CCDC7-213ENST00000639290 COLGALT2Q8IYK4 626 aa3.93□□□□□ -1.78
CCDC7-213ENST00000639290 OXR1Q8N573 874 aa3.93□□□□□ -1.78
CCDC7-213ENST00000639290 SLC7A3Q8WY07 619 aa3.93□□□□□ -1.78
CCDC7-213ENST00000639290 DYNLL2Q96FJ2 89 aa3.93□□□□□ -1.78
CCDC7-213ENST00000639290 SECISBP2Q96T21 854 aaKnown RBP3.93□□□□□ -1.78
CCDC7-213ENST00000639290 FAM83CQ9BQN1 747 aa3.93□□□□□ -1.78
CCDC7-213ENST00000639290 IL21RQ9HBE5 538 aa3.93□□□□□ -1.78
CCDC7-213ENST00000639290 HCFC1R1Q9NWW0 138 aa3.93□□□□□ -1.78
CCDC7-213ENST00000639290 POLIQ9UNA4 740 aa3.93□□□□□ -1.78
CCDC7-213ENST00000639290 SALL2Q9Y467 1007 aaPredicted RBP3.93□□□□□ -1.78
CCDC7-213ENST00000639290 PCDHA5Q9Y5H7 936 aa3.93□□□□□ -1.78
CCDC7-213ENST00000639290 SF3B1O75533 1304 aaKnown RBP eCLIP3.93□□□□□ -1.78
CCDC7-213ENST00000639290 CABIN1Q9Y6J0 2220 aa3.93□□□□□ -1.78
CCDC7-213ENST00000639290 A0A1B0GTQ1 180 aa3.93□□□□□ -1.78
CCDC7-213ENST00000639290 ZBTB24O43167 697 aaPredicted RBP3.93□□□□□ -1.78
CCDC7-213ENST00000639290 MARCH6O60337 910 aa3.93□□□□□ -1.78
CCDC7-213ENST00000639290 NDUFS2O75306 463 aa3.93□□□□□ -1.78
CCDC7-213ENST00000639290 VIPR2P41587 438 aa3.93□□□□□ -1.78
CCDC7-213ENST00000639290 NOP2P46087 812 aaKnown RBP3.93□□□□□ -1.78
CCDC7-213ENST00000639290 GALK1P51570 392 aa3.93□□□□□ -1.78
CCDC7-213ENST00000639290 AFF3P51826 1226 aaKnown RBP3.93□□□□□ -1.78
CCDC7-213ENST00000639290 TIMM10P62072 90 aa3.93□□□□□ -1.78
CCDC7-213ENST00000639290 CTDSPL2Q05D32 466 aa3.93□□□□□ -1.78
CCDC7-213ENST00000639290 EIF3IQ13347 325 aaKnown RBP3.93□□□□□ -1.78
CCDC7-213ENST00000639290 ZRSR2Q15696 482 aaKnown RBP3.93□□□□□ -1.78
CCDC7-213ENST00000639290 TSNAXIP1Q2TAA8 658 aa3.93□□□□□ -1.78
CCDC7-213ENST00000639290 ZRANB3Q5FWF4 1079 aa3.93□□□□□ -1.78
CCDC7-213ENST00000639290 IQCEQ6IPM2 695 aa3.93□□□□□ -1.78
CCDC7-213ENST00000639290 FUT10Q6P4F1 479 aa3.93□□□□□ -1.78
CCDC7-213ENST00000639290 SIRT2Q8IXJ6 389 aa3.93□□□□□ -1.78
CCDC7-213ENST00000639290 TCEAL8Q8IYN2 117 aa3.93□□□□□ -1.78
CCDC7-213ENST00000639290 RGL4Q8IZJ4 473 aa3.93□□□□□ -1.78
CCDC7-213ENST00000639290 SEPT1Q8WYJ6 367 aa3.93□□□□□ -1.78
CCDC7-213ENST00000639290 TCTN2Q96GX1 697 aa3.93□□□□□ -1.78
CCDC7-213ENST00000639290 CDHR1Q96JP9 859 aa3.93□□□□□ -1.78
CCDC7-213ENST00000639290 TAAR1Q96RJ0 339 aa3.93□□□□□ -1.78
CCDC7-213ENST00000639290 TRIM8Q9BZR9 551 aa3.93□□□□□ -1.78
CCDC7-213ENST00000639290 PKD2L1Q9P0L9 805 aa3.93□□□□□ -1.78
CCDC7-213ENST00000639290 BCCIPQ9P287 314 aaKnown RBP eCLIP3.93□□□□□ -1.78
CCDC7-213ENST00000639290 DNAJB4Q9UDY4 337 aa3.93□□□□□ -1.78
CCDC7-213ENST00000639290 TMA7Q9Y2S6 64 aaKnown RBP3.93□□□□□ -1.78
CCDC7-213ENST00000639290 N4BP3O15049 544 aa3.92□□□□□ -1.78
CCDC7-213ENST00000639290 RNF113AO15541 343 aaKnown RBP3.92□□□□□ -1.78
CCDC7-213ENST00000639290 PRICKLE3O43900 615 aaPredicted RBP3.92□□□□□ -1.78
CCDC7-213ENST00000639290 MOSPD3O75425 235 aa3.92□□□□□ -1.78
CCDC7-213ENST00000639290 INSRRP14616 1297 aa3.92□□□□□ -1.78
CCDC7-213ENST00000639290 COX6B1P14854 86 aa3.92□□□□□ -1.78
CCDC7-213ENST00000639290 OXTRP30559 389 aa3.92□□□□□ -1.78
CCDC7-213ENST00000639290 HSD17B4P51659 736 aa3.92□□□□□ -1.78
CCDC7-213ENST00000639290 ART1P52961 327 aa3.92□□□□□ -1.78
CCDC7-213ENST00000639290 CYP4F2P78329 520 aa3.92□□□□□ -1.78
CCDC7-213ENST00000639290 TWISTNBQ3B726 338 aaPredicted RBP3.92□□□□□ -1.78
CCDC7-213ENST00000639290 MANEAQ5SRI9 462 aa3.92□□□□□ -1.78
CCDC7-213ENST00000639290 LIAT1Q6ZQX7 453 aa3.92□□□□□ -1.78
CCDC7-213ENST00000639290 MIGA1Q8NAN2 632 aa3.92□□□□□ -1.78
CCDC7-213ENST00000639290 NEDD1Q8NHV4 660 aa3.92□□□□□ -1.78
CCDC7-213ENST00000639290 WDR48Q8TAF3 677 aa3.92□□□□□ -1.78
CCDC7-213ENST00000639290 CPT1CQ8TCG5 803 aa3.92□□□□□ -1.78
CCDC7-213ENST00000639290 TMEM40Q8WWA1 233 aa3.92□□□□□ -1.78
CCDC7-213ENST00000639290 GTSE1Q9NYZ3 720 aa3.92□□□□□ -1.78
CCDC7-213ENST00000639290 STK17AQ9UEE5 414 aa3.92□□□□□ -1.78
CCDC7-213ENST00000639290 PCDHA1Q9Y5I3 950 aa3.92□□□□□ -1.78
CCDC7-213ENST00000639290 UTP20O75691 2785 aaKnown RBP3.92□□□□□ -1.78
CCDC7-213ENST00000639290 CELSR2Q9HCU4 2923 aa3.92□□□□□ -1.78
CCDC7-213ENST00000639290 FAM187AA6NFU0 413 aa3.92□□□□□ -1.78
CCDC7-213ENST00000639290 ELL2O00472 640 aaPredicted RBP3.92□□□□□ -1.78
CCDC7-213ENST00000639290 KCNAB3O43448 404 aa3.92□□□□□ -1.78
CCDC7-213ENST00000639290 USP12O75317 370 aa3.92□□□□□ -1.78
CCDC7-213ENST00000639290 GPR32O75388 356 aa3.92□□□□□ -1.78
CCDC7-213ENST00000639290 CD2BP2O95400 341 aaKnown RBP3.92□□□□□ -1.78
CCDC7-213ENST00000639290 EIF2DP41214 584 aaKnown RBP3.92□□□□□ -1.78
CCDC7-213ENST00000639290 GCGRP47871 477 aa3.92□□□□□ -1.78
CCDC7-213ENST00000639290 NOVP48745 357 aa3.92□□□□□ -1.78
CCDC7-213ENST00000639290 SP2Q02086 613 aa3.92□□□□□ -1.78
CCDC7-213ENST00000639290 FUT2Q10981 343 aa3.92□□□□□ -1.78
CCDC7-213ENST00000639290 TRAF1Q13077 416 aa3.92□□□□□ -1.78
CCDC7-213ENST00000639290 ZNF268Q14587 947 aaPredicted RBP3.92□□□□□ -1.78
CCDC7-213ENST00000639290 PSMD5Q16401 504 aa3.92□□□□□ -1.78
CCDC7-213ENST00000639290 CRTC2Q53ET0 693 aaPredicted RBP3.92□□□□□ -1.78
CCDC7-213ENST00000639290 TSHZ3Q63HK5 1081 aa3.92□□□□□ -1.78
CCDC7-213ENST00000639290 PI16Q6UXB8 463 aa3.92□□□□□ -1.78
CCDC7-213ENST00000639290 STOX1Q6ZVD7 989 aa3.92□□□□□ -1.78
CCDC7-213ENST00000639290 HPS6Q86YV9 775 aa3.92□□□□□ -1.78
CCDC7-213ENST00000639290 WDR36Q8NI36 951 aaKnown RBP3.92□□□□□ -1.78
CCDC7-213ENST00000639290 GPBAR1Q8TDU6 330 aa3.92□□□□□ -1.78
CCDC7-213ENST00000639290 PRR11Q96HE9 360 aaPredicted RBP3.92□□□□□ -1.78
CCDC7-213ENST00000639290 INPP4AQ96PE3 977 aaPredicted RBP3.92□□□□□ -1.78
CCDC7-213ENST00000639290 LRRCC1Q9C099 1032 aa3.92□□□□□ -1.78
CCDC7-213ENST00000639290 ASAH2Q9NR71 780 aa3.92□□□□□ -1.78
CCDC7-213ENST00000639290 MRPL11Q9Y3B7 192 aaKnown RBP3.92□□□□□ -1.78
CCDC7-213ENST00000639290 SUPT16HQ9Y5B9 1047 aaKnown RBP3.92□□□□□ -1.78
CCDC7-213ENST00000639290 DOCK6Q96HP0 2047 aa3.92□□□□□ -1.78
CCDC7-213ENST00000639290 MGAQ8IWI9 3026 aa3.92□□□□□ -1.78
CCDC7-213ENST00000639290 CSPG4Q6UVK1 2322 aa3.92□□□□□ -1.78
CCDC7-213ENST00000639290 STAB1Q9NY15 2570 aa3.92□□□□□ -1.78
CCDC7-213ENST00000639290 GOLGA4Q13439 2230 aaKnown RBP3.91□□□□□ -1.78
CCDC7-213ENST00000639290 MYO5AQ9Y4I1 1855 aaKnown RBP3.91□□□□□ -1.78
CCDC7-213ENST00000639290 A0A0A0MRY4 1105 aa3.91□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms