RNA–Protein interactions for RNA: ENST00000638142.2

SYNGAP1-227, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 2,499 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-227ENST00000638142 FETUBQ9UGM5 382 aa21.21■□□□□ 0.99
SYNGAP1-227ENST00000638142 GRID1Q9ULK0 1009 aa21.21■□□□□ 0.99
SYNGAP1-227ENST00000638142 ACTR2P61160 394 aa21.2■□□□□ 0.98
SYNGAP1-227ENST00000638142 DNAJC24Q6P3W2 148 aa21.2■□□□□ 0.98
SYNGAP1-227ENST00000638142 ABHD15Q6UXT9 468 aa21.2■□□□□ 0.98
SYNGAP1-227ENST00000638142 RPAP3Q9H6T3 665 aaPredicted RBP21.2■□□□□ 0.98
SYNGAP1-227ENST00000638142 TCRBV5S1A1TA0A578 114 aa21.2■□□□□ 0.98
SYNGAP1-227ENST00000638142 RGS20O76081 388 aa21.2■□□□□ 0.98
SYNGAP1-227ENST00000638142 APBA3O96018 575 aa21.2■□□□□ 0.98
SYNGAP1-227ENST00000638142 TAP1Q03518 808 aa21.2■□□□□ 0.98
SYNGAP1-227ENST00000638142 NCOA4Q13772 614 aa21.2■□□□□ 0.98
SYNGAP1-227ENST00000638142 PIGHQ14442 188 aaPredicted RBP21.2■□□□□ 0.98
SYNGAP1-227ENST00000638142 WDR72Q3MJ13 1102 aa21.2■□□□□ 0.98
SYNGAP1-227ENST00000638142 EFHC2Q5JST6 749 aa21.2■□□□□ 0.98
SYNGAP1-227ENST00000638142 HHATQ5VTY9 493 aa21.2■□□□□ 0.98
SYNGAP1-227ENST00000638142 PCGF5Q86SE9 256 aa21.2■□□□□ 0.98
SYNGAP1-227ENST00000638142 RTKN2Q8IZC4 609 aa21.2■□□□□ 0.98
SYNGAP1-227ENST00000638142 NSUN6Q8TEA1 469 aaKnown RBP21.2■□□□□ 0.98
SYNGAP1-227ENST00000638142 C10orf82Q8WW14 230 aa21.2■□□□□ 0.98
SYNGAP1-227ENST00000638142 MCEEQ96PE7 176 aa21.2■□□□□ 0.98
SYNGAP1-227ENST00000638142 MSTO1Q9BUK6 570 aa21.2■□□□□ 0.98
SYNGAP1-227ENST00000638142 IMPG2Q9BZV3 1241 aa21.2■□□□□ 0.98
SYNGAP1-227ENST00000638142 NAMPTP43490 491 aa21.19■□□□□ 0.98
SYNGAP1-227ENST00000638142 PDIA2Q13087 525 aaKnown RBP21.19■□□□□ 0.98
SYNGAP1-227ENST00000638142 SLC1A5Q15758 541 aa21.19■□□□□ 0.98
SYNGAP1-227ENST00000638142 HP1BP3Q5SSJ5 553 aaPredicted RBP21.19■□□□□ 0.98
SYNGAP1-227ENST00000638142 UBR7Q8N806 425 aa21.19■□□□□ 0.98
SYNGAP1-227ENST00000638142 RIPK3Q9Y572 518 aa21.19■□□□□ 0.98
SYNGAP1-227ENST00000638142 KIAA1217Q5T5P2 1943 aa21.19■□□□□ 0.98
SYNGAP1-227ENST00000638142 CNTNAP2Q9UHC6 1331 aa21.19■□□□□ 0.98
SYNGAP1-227ENST00000638142 A0A0B4J269 797 aa21.19■□□□□ 0.98
SYNGAP1-227ENST00000638142 F8VP50 259 aa21.19■□□□□ 0.98
SYNGAP1-227ENST00000638142 K7ERI5 159 aa21.19■□□□□ 0.98
SYNGAP1-227ENST00000638142 WNT10BO00744 389 aa21.19■□□□□ 0.98
SYNGAP1-227ENST00000638142 LIN7AO14910 233 aaPredicted RBP21.19■□□□□ 0.98
SYNGAP1-227ENST00000638142 ZWINTO95229 277 aa21.19■□□□□ 0.98
SYNGAP1-227ENST00000638142 CDKN2BP42772 138 aa21.19■□□□□ 0.98
SYNGAP1-227ENST00000638142 RASSF2P50749 326 aa21.19■□□□□ 0.98
SYNGAP1-227ENST00000638142 SP4Q02446 784 aa21.19■□□□□ 0.98
SYNGAP1-227ENST00000638142 ZC3H12AQ5D1E8 599 aaKnown RBP21.19■□□□□ 0.98
SYNGAP1-227ENST00000638142 DCUN1D2Q6PH85 259 aa21.19■□□□□ 0.98
SYNGAP1-227ENST00000638142 DEPTORQ8TB45 409 aa21.19■□□□□ 0.98
SYNGAP1-227ENST00000638142 ZBTB45Q96K62 511 aaPredicted RBP21.19■□□□□ 0.98
SYNGAP1-227ENST00000638142 TELO2Q9Y4R8 837 aa21.19■□□□□ 0.98
SYNGAP1-227ENST00000638142 SGK1O00141 431 aa21.18■□□□□ 0.98
SYNGAP1-227ENST00000638142 CLGNO14967 610 aa21.18■□□□□ 0.98
SYNGAP1-227ENST00000638142 TARSP26639 723 aaKnown RBP21.18■□□□□ 0.98
SYNGAP1-227ENST00000638142 GEMIN4P57678 1058 aaKnown RBP21.18■□□□□ 0.98
SYNGAP1-227ENST00000638142 MTMR2Q13614 643 aa21.18■□□□□ 0.98
SYNGAP1-227ENST00000638142 HIF1AQ16665 826 aa21.18■□□□□ 0.98
SYNGAP1-227ENST00000638142 CAPN12Q6ZSI9 719 aa21.18■□□□□ 0.98
SYNGAP1-227ENST00000638142 NIPA2Q8N8Q9 360 aa21.18■□□□□ 0.98
SYNGAP1-227ENST00000638142 OR5B17Q8NGF7 314 aa21.18■□□□□ 0.98
SYNGAP1-227ENST00000638142 PORCNQ9H237 461 aa21.18■□□□□ 0.98
SYNGAP1-227ENST00000638142 LRRD1A4D1F6 860 aa21.18■□□□□ 0.98
SYNGAP1-227ENST00000638142 PHBP35232 272 aa21.18■□□□□ 0.98
SYNGAP1-227ENST00000638142 ANKRD20A2Q5SQ80 823 aa21.18■□□□□ 0.98
SYNGAP1-227ENST00000638142 ZBTB41Q5SVQ8 909 aa21.18■□□□□ 0.98
SYNGAP1-227ENST00000638142 ANKRD20A1Q5TYW2 823 aa21.18■□□□□ 0.98
SYNGAP1-227ENST00000638142 ANKRD20A3Q5VUR7 823 aa21.18■□□□□ 0.98
SYNGAP1-227ENST00000638142 TMEM35BQ8NCS4 154 aa21.18■□□□□ 0.98
SYNGAP1-227ENST00000638142 SLC35B2Q8TB61 432 aa21.18■□□□□ 0.98
SYNGAP1-227ENST00000638142 ATG4CQ96DT6 458 aa21.18■□□□□ 0.98
SYNGAP1-227ENST00000638142 TMEM121Q9BTD3 319 aa21.18■□□□□ 0.98
SYNGAP1-227ENST00000638142 ZNF518BQ9C0D4 1074 aa21.18■□□□□ 0.98
SYNGAP1-227ENST00000638142 ANKFY1Q9P2R3 1169 aa21.18■□□□□ 0.98
SYNGAP1-227ENST00000638142 HAO1Q9UJM8 370 aa21.18■□□□□ 0.98
SYNGAP1-227ENST00000638142 FARP1Q9Y4F1 1045 aaPredicted RBP21.18■□□□□ 0.98
SYNGAP1-227ENST00000638142 COL4A5P29400 1685 aa21.18■□□□□ 0.98
SYNGAP1-227ENST00000638142 SIP14410 1827 aa21.17■□□□□ 0.98
SYNGAP1-227ENST00000638142 SUPT20HL2P0C7V6 817 aa21.17■□□□□ 0.98
SYNGAP1-227ENST00000638142 GLRA2P23416 452 aa21.17■□□□□ 0.98
SYNGAP1-227ENST00000638142 PLCB3Q01970 1234 aa21.17■□□□□ 0.98
SYNGAP1-227ENST00000638142 SUPT20HL1Q3ZLR7 823 aa21.17■□□□□ 0.98
SYNGAP1-227ENST00000638142 ZNF398Q8TD17 642 aa21.17■□□□□ 0.98
SYNGAP1-227ENST00000638142 ASAP3Q8TDY4 903 aa21.17■□□□□ 0.98
SYNGAP1-227ENST00000638142 TMEM143Q96AN5 459 aa21.17■□□□□ 0.98
SYNGAP1-227ENST00000638142 MAK16Q9BXY0 300 aaKnown RBP21.17■□□□□ 0.98
SYNGAP1-227ENST00000638142 CYLDQ9NQC7 956 aa21.17■□□□□ 0.98
SYNGAP1-227ENST00000638142 ADGRA2Q96PE1 1338 aa21.17■□□□□ 0.98
SYNGAP1-227ENST00000638142 FER1L6Q2WGJ9 1857 aa21.17■□□□□ 0.98
SYNGAP1-227ENST00000638142 A0A1W2PPM1 405 aa21.17■□□□□ 0.98
SYNGAP1-227ENST00000638142 LRRIQ4A6NIV6 560 aa21.17■□□□□ 0.98
SYNGAP1-227ENST00000638142 IFNB1P01574 187 aa21.17■□□□□ 0.98
SYNGAP1-227ENST00000638142 AP3M2P53677 418 aa21.17■□□□□ 0.98
SYNGAP1-227ENST00000638142 OGDHQ02218 1023 aa21.17■□□□□ 0.98
SYNGAP1-227ENST00000638142 SLC45A4Q5BKX6 768 aa21.17■□□□□ 0.98
SYNGAP1-227ENST00000638142 PPP1R15BQ5SWA1 713 aa21.17■□□□□ 0.98
SYNGAP1-227ENST00000638142 LVRNQ6Q4G3 990 aa21.17■□□□□ 0.98
SYNGAP1-227ENST00000638142 ATP11CQ8NB49 1132 aa21.17■□□□□ 0.98
SYNGAP1-227ENST00000638142 ZNF75CPQ92670 426 aaPredicted RBP21.17■□□□□ 0.98
SYNGAP1-227ENST00000638142 HAUS1Q96CS2 278 aa21.17■□□□□ 0.98
SYNGAP1-227ENST00000638142 TARS2Q9BW92 718 aaKnown RBP21.17■□□□□ 0.98
SYNGAP1-227ENST00000638142 FRMD8P1Q9BZ68 369 aaPredicted RBP21.17■□□□□ 0.98
SYNGAP1-227ENST00000638142 ZNF277Q9NRM2 450 aaPredicted RBP21.17■□□□□ 0.98
SYNGAP1-227ENST00000638142 EFR3BQ9Y2G0 817 aa21.17■□□□□ 0.98
SYNGAP1-227ENST00000638142 TRAFD1O14545 582 aaPredicted RBP21.16■□□□□ 0.98
SYNGAP1-227ENST00000638142 STAM2O75886 525 aa21.16■□□□□ 0.98
SYNGAP1-227ENST00000638142 KRT4P19013 534 aa21.16■□□□□ 0.98
SYNGAP1-227ENST00000638142 GPX6P59796 221 aa21.16■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms