RNA–Protein interactions for RNA: ENST00000637897.1

PNKP-229, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 190 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-229ENST00000637897 POLR2BP30876 1174 aaKnown RBP8.46□□□□□ -1.06
PNKP-229ENST00000637897 ELF1P32519 619 aa8.46□□□□□ -1.06
PNKP-229ENST00000637897 CUL4BQ13620 913 aa8.46□□□□□ -1.06
PNKP-229ENST00000637897 STK38Q15208 465 aa8.46□□□□□ -1.06
PNKP-229ENST00000637897 SDHAF4Q5VUM1 108 aa8.46□□□□□ -1.06
PNKP-229ENST00000637897 RESP18Q5W5W9 173 aa8.46□□□□□ -1.06
PNKP-229ENST00000637897 MTSS1LQ765P7 747 aa8.46□□□□□ -1.06
PNKP-229ENST00000637897 PDCL2Q8N4E4 241 aa8.46□□□□□ -1.06
PNKP-229ENST00000637897 KCNG4Q8TDN1 519 aa8.46□□□□□ -1.06
PNKP-229ENST00000637897 KBTBD7Q8WVZ9 684 aa8.46□□□□□ -1.06
PNKP-229ENST00000637897 PSMG2Q969U7 264 aa8.46□□□□□ -1.06
PNKP-229ENST00000637897 CLDN23Q96B33 292 aa8.46□□□□□ -1.06
PNKP-229ENST00000637897 PYM1Q9BRP8 204 aaKnown RBP8.46□□□□□ -1.06
PNKP-229ENST00000637897 BLZF1Q9H2G9 400 aa8.46□□□□□ -1.06
PNKP-229ENST00000637897 TNMDQ9H2S6 317 aa8.46□□□□□ -1.06
PNKP-229ENST00000637897 LTB4R2Q9NPC1 389 aa8.46□□□□□ -1.06
PNKP-229ENST00000637897 MAFFQ9ULX9 164 aa8.46□□□□□ -1.06
PNKP-229ENST00000637897 MIA3Q5JRA6 1907 aa8.46□□□□□ -1.06
PNKP-229ENST00000637897 ZNF292O60281 2723 aa8.45□□□□□ -1.06
PNKP-229ENST00000637897 PTPRDP23468 1912 aa8.45□□□□□ -1.06
PNKP-229ENST00000637897 GREB1Q4ZG55 1949 aa8.45□□□□□ -1.06
PNKP-229ENST00000637897 OTOL1A6NHN0 477 aaPredicted RBP8.45□□□□□ -1.06
PNKP-229ENST00000637897 HEPACAM2A8MVW5 462 aa8.45□□□□□ -1.06
PNKP-229ENST00000637897 KPNA7A9QM74 516 aa8.45□□□□□ -1.06
PNKP-229ENST00000637897 GABRDO14764 452 aa8.45□□□□□ -1.06
PNKP-229ENST00000637897 POLR2DO15514 142 aaKnown RBP8.45□□□□□ -1.06
PNKP-229ENST00000637897 EXTL3O43909 919 aa8.45□□□□□ -1.06
PNKP-229ENST00000637897 GFRA3O60609 400 aa8.45□□□□□ -1.06
PNKP-229ENST00000637897 ATP2C2O75185 946 aa8.45□□□□□ -1.06
PNKP-229ENST00000637897 CST3P01034 146 aaPredicted RBP8.45□□□□□ -1.06
PNKP-229ENST00000637897 ITGB3P05106 788 aa8.45□□□□□ -1.06
PNKP-229ENST00000637897 HAPLN1P10915 354 aaPredicted RBP8.45□□□□□ -1.06
PNKP-229ENST00000637897 ODC1P11926 461 aa8.45□□□□□ -1.06
PNKP-229ENST00000637897 ACAT1P24752 427 aaKnown RBP8.45□□□□□ -1.06
PNKP-229ENST00000637897 LMO2P25791 158 aa8.45□□□□□ -1.06
PNKP-229ENST00000637897 TAF6P49848 677 aa8.45□□□□□ -1.06
PNKP-229ENST00000637897 SOWAHAQ2M3V2 549 aa8.45□□□□□ -1.06
PNKP-229ENST00000637897 SLC39A12Q504Y0 691 aa8.45□□□□□ -1.06
PNKP-229ENST00000637897 TXNDC11Q6PKC3 985 aa8.45□□□□□ -1.06
PNKP-229ENST00000637897 PDZD4Q76G19 769 aaPredicted RBP8.45□□□□□ -1.06
PNKP-229ENST00000637897 KIAA0895Q8NCT3 520 aa8.45□□□□□ -1.06
PNKP-229ENST00000637897 ZSCAN18Q8TBC5 510 aaPredicted RBP8.45□□□□□ -1.06
PNKP-229ENST00000637897 GIPC2Q8TF65 315 aa8.45□□□□□ -1.06
PNKP-229ENST00000637897 NELL1Q92832 810 aa8.45□□□□□ -1.06
PNKP-229ENST00000637897 SMARCD2Q92925 531 aa8.45□□□□□ -1.06
PNKP-229ENST00000637897 ELMO3Q96BJ8 720 aa8.45□□□□□ -1.06
PNKP-229ENST00000637897 MTMR12Q9C0I1 747 aa8.45□□□□□ -1.06
PNKP-229ENST00000637897 SMG9Q9H0W8 520 aaKnown RBP8.45□□□□□ -1.06
PNKP-229ENST00000637897 NUP62CLQ9H1M0 184 aa8.45□□□□□ -1.06
PNKP-229ENST00000637897 TMEM30AQ9NV96 361 aa8.45□□□□□ -1.06
PNKP-229ENST00000637897 INTS13Q9NVM9 706 aa8.45□□□□□ -1.06
PNKP-229ENST00000637897 C2orf42Q9NWW7 574 aa8.45□□□□□ -1.06
PNKP-229ENST00000637897 RBAKQ9NYW8 714 aaPredicted RBP8.45□□□□□ -1.06
PNKP-229ENST00000637897 AGAP1Q9UPQ3 857 aa8.45□□□□□ -1.06
PNKP-229ENST00000637897 HPSEQ9Y251 543 aa8.45□□□□□ -1.06
PNKP-229ENST00000637897 SIT1Q9Y3P8 196 aa8.45□□□□□ -1.06
PNKP-229ENST00000637897 PCDHB13Q9Y5F0 798 aa8.45□□□□□ -1.06
PNKP-229ENST00000637897 R4GN57 208 aa8.45□□□□□ -1.06
PNKP-229ENST00000637897 NUP210Q8TEM1 1887 aaPredicted RBP8.45□□□□□ -1.06
PNKP-229ENST00000637897 ANAPC1Q9H1A4 1944 aa8.44□□□□□ -1.06
PNKP-229ENST00000637897 A0A1W2PQ27 194 aa8.44□□□□□ -1.06
PNKP-229ENST00000637897 A0A1W2PQ64 194 aa8.44□□□□□ -1.06
PNKP-229ENST00000637897 A0A1W2PQD8 194 aa8.44□□□□□ -1.06
PNKP-229ENST00000637897 MYBPHLA2RUH7 354 aa8.44□□□□□ -1.06
PNKP-229ENST00000637897 FAM170BA6NMN3 283 aa8.44□□□□□ -1.06
PNKP-229ENST00000637897 CLIC2O15247 247 aa8.44□□□□□ -1.06
PNKP-229ENST00000637897 XPOTO43592 962 aaKnown RBP8.44□□□□□ -1.06
PNKP-229ENST00000637897 IL18RAPO95256 599 aa8.44□□□□□ -1.06
PNKP-229ENST00000637897 F11P03951 625 aa8.44□□□□□ -1.06
PNKP-229ENST00000637897 SP9P0CG40 484 aa8.44□□□□□ -1.06
PNKP-229ENST00000637897 ME1P48163 572 aa8.44□□□□□ -1.06
PNKP-229ENST00000637897 SOX9P48436 509 aa8.44□□□□□ -1.06
PNKP-229ENST00000637897 ZXDBP98169 803 aa8.44□□□□□ -1.06
PNKP-229ENST00000637897 CYP4F8P98187 520 aa8.44□□□□□ -1.06
PNKP-229ENST00000637897 TFAMQ00059 246 aaKnown RBP8.44□□□□□ -1.06
PNKP-229ENST00000637897 PRKCQQ04759 706 aa8.44□□□□□ -1.06
PNKP-229ENST00000637897 FCHO2Q0JRZ9 810 aa8.44□□□□□ -1.06
PNKP-229ENST00000637897 STK4Q13043 487 aa8.44□□□□□ -1.06
PNKP-229ENST00000637897 POSTNQ15063 836 aa8.44□□□□□ -1.06
PNKP-229ENST00000637897 BMT2Q1RMZ1 405 aa8.44□□□□□ -1.06
PNKP-229ENST00000637897 TPRG1Q6ZUI0 275 aa8.44□□□□□ -1.06
PNKP-229ENST00000637897 UNC13DQ70J99 1090 aa8.44□□□□□ -1.06
PNKP-229ENST00000637897 NT5DC4Q86YG4 428 aa8.44□□□□□ -1.06
PNKP-229ENST00000637897 ARID3BQ8IVW6 561 aaPredicted RBP8.44□□□□□ -1.06
PNKP-229ENST00000637897 C1orf210Q8IVY1 113 aa8.44□□□□□ -1.06
PNKP-229ENST00000637897 GPD1LQ8N335 351 aa8.44□□□□□ -1.06
PNKP-229ENST00000637897 ZFYVE19Q96K21 471 aa8.44□□□□□ -1.06
PNKP-229ENST00000637897 ZNF512Q96ME7 567 aaPredicted RBP8.44□□□□□ -1.06
PNKP-229ENST00000637897 SLC46A2Q9BY10 475 aa8.44□□□□□ -1.06
PNKP-229ENST00000637897 RBSNQ9H1K0 784 aa8.44□□□□□ -1.06
PNKP-229ENST00000637897 CLSTN2Q9H4D0 955 aa8.44□□□□□ -1.06
PNKP-229ENST00000637897 ZFP14Q9HCL3 533 aa8.44□□□□□ -1.06
PNKP-229ENST00000637897 ASAH2Q9NR71 780 aa8.44□□□□□ -1.06
PNKP-229ENST00000637897 AGPAT3Q9NRZ7 376 aa8.44□□□□□ -1.06
PNKP-229ENST00000637897 GDAP2Q9NXN4 497 aa8.44□□□□□ -1.06
PNKP-229ENST00000637897 HSPBP1Q9NZL4 362 aa8.44□□□□□ -1.06
PNKP-229ENST00000637897 HSFX1Q9UBD0 423 aa8.44□□□□□ -1.06
PNKP-229ENST00000637897 SERTAD1Q9UHV2 236 aa8.44□□□□□ -1.06
PNKP-229ENST00000637897 CCL26Q9Y258 94 aa8.44□□□□□ -1.06
PNKP-229ENST00000637897 CEP250Q9BV73 2442 aa8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms