RNA–Protein interactions for RNA: ENST00000637450.1

CLN6-220, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 3

Gene CLN6, Length 868 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-220ENST00000637450 CDC25CP30307 473 aa19.91■□□□□ 0.78
CLN6-220ENST00000637450 PNPLA4P41247 253 aa19.91■□□□□ 0.78
CLN6-220ENST00000637450 CASP5P51878 434 aa19.91■□□□□ 0.78
CLN6-220ENST00000637450 BRSK2Q8IWQ3 736 aa19.91■□□□□ 0.78
CLN6-220ENST00000637450 SAAL1Q96ER3 474 aa19.91■□□□□ 0.78
CLN6-220ENST00000637450 ZNF560Q96MR9 790 aa19.91■□□□□ 0.78
CLN6-220ENST00000637450 USP28Q96RU2 1077 aa19.91■□□□□ 0.78
CLN6-220ENST00000637450 MTMR6Q9Y217 621 aa19.91■□□□□ 0.78
CLN6-220ENST00000637450 CACNA1AO00555 2505 aa19.91■□□□□ 0.78
CLN6-220ENST00000637450 PATJQ8NI35 1801 aa19.9■□□□□ 0.78
CLN6-220ENST00000637450 SCN1AP35498 2009 aa19.9■□□□□ 0.78
CLN6-220ENST00000637450 MYBPHLA2RUH7 354 aa19.9■□□□□ 0.78
CLN6-220ENST00000637450 SLC38A8A6NNN8 435 aa19.9■□□□□ 0.78
CLN6-220ENST00000637450 IDEP14735 1019 aa19.9■□□□□ 0.78
CLN6-220ENST00000637450 STAT6P42226 847 aa19.9■□□□□ 0.78
CLN6-220ENST00000637450 SOX9P48436 509 aa19.9■□□□□ 0.78
CLN6-220ENST00000637450 KPNA1P52294 538 aaPredicted RBP19.9■□□□□ 0.78
CLN6-220ENST00000637450 NRLP54845 237 aa19.9■□□□□ 0.78
CLN6-220ENST00000637450 CYP4F8P98187 520 aa19.9■□□□□ 0.78
CLN6-220ENST00000637450 TFAMQ00059 246 aaKnown RBP19.9■□□□□ 0.78
CLN6-220ENST00000637450 ALCAMQ13740 583 aa19.9■□□□□ 0.78
CLN6-220ENST00000637450 PPP2R5DQ14738 602 aa19.9■□□□□ 0.78
CLN6-220ENST00000637450 ARHGAP29Q52LW3 1261 aa19.9■□□□□ 0.78
CLN6-220ENST00000637450 C1orf127Q8N9H9 656 aa19.9■□□□□ 0.78
CLN6-220ENST00000637450 GIPC2Q8TF65 315 aa19.9■□□□□ 0.78
CLN6-220ENST00000637450 CACTINQ8WUQ7 758 aaKnown RBP19.9■□□□□ 0.78
CLN6-220ENST00000637450 SLC46A2Q9BY10 475 aa19.9■□□□□ 0.78
CLN6-220ENST00000637450 FGFBP2Q9BYJ0 223 aa19.9■□□□□ 0.78
CLN6-220ENST00000637450 ZSCAN16Q9H4T2 348 aaPredicted RBP19.9■□□□□ 0.78
CLN6-220ENST00000637450 AGAP1Q9UPQ3 857 aa19.9■□□□□ 0.78
CLN6-220ENST00000637450 PRAMEF12O95522 483 aa19.89■□□□□ 0.77
CLN6-220ENST00000637450 COL4A2P08572 1712 aa19.89■□□□□ 0.77
CLN6-220ENST00000637450 POLR2BP30876 1174 aaKnown RBP19.89■□□□□ 0.77
CLN6-220ENST00000637450 CCR3P51677 355 aa19.89■□□□□ 0.77
CLN6-220ENST00000637450 GAS6Q14393 721 aa19.89■□□□□ 0.77
CLN6-220ENST00000637450 TAF12Q16514 161 aa19.89■□□□□ 0.77
CLN6-220ENST00000637450 RALGPS2Q86X27 583 aaPredicted RBP19.89■□□□□ 0.77
CLN6-220ENST00000637450 SYCP3Q8IZU3 236 aa19.89■□□□□ 0.77
CLN6-220ENST00000637450 CXorf38Q8TB03 319 aa19.89■□□□□ 0.77
CLN6-220ENST00000637450 ZFYVE19Q96K21 471 aa19.89■□□□□ 0.77
CLN6-220ENST00000637450 GCNAQ96QF7 691 aa19.89■□□□□ 0.77
CLN6-220ENST00000637450 PANK4Q9NVE7 773 aa19.89■□□□□ 0.77
CLN6-220ENST00000637450 TMLHEQ9NVH6 421 aa19.89■□□□□ 0.77
CLN6-220ENST00000637450 ABI2Q9NYB9 513 aaPredicted RBP19.89■□□□□ 0.77
CLN6-220ENST00000637450 RBAKQ9NYW8 714 aaPredicted RBP19.89■□□□□ 0.77
CLN6-220ENST00000637450 NCDNQ9UBB6 729 aa19.89■□□□□ 0.77
CLN6-220ENST00000637450 SMG5Q9UPR3 1016 aaKnown RBP19.89■□□□□ 0.77
CLN6-220ENST00000637450 PCDHB5Q9Y5E4 795 aa19.89■□□□□ 0.77
CLN6-220ENST00000637450 CEP250Q9BV73 2442 aa19.88■□□□□ 0.77
CLN6-220ENST00000637450 SPECC1L-ADORA2AF8WAN1 911 aa19.88■□□□□ 0.77
CLN6-220ENST00000637450 EXTL3O43909 919 aa19.88■□□□□ 0.77
CLN6-220ENST00000637450 ITGB3P05106 788 aa19.88■□□□□ 0.77
CLN6-220ENST00000637450 HMGA1P17096 107 aaKnown RBP19.88■□□□□ 0.77
CLN6-220ENST00000637450 CXCL12P48061 93 aa19.88■□□□□ 0.77
CLN6-220ENST00000637450 PLCB2Q00722 1185 aa19.88■□□□□ 0.77
CLN6-220ENST00000637450 TSPY1Q01534 308 aa19.88■□□□□ 0.77
CLN6-220ENST00000637450 WDR44Q5JSH3 913 aa19.88■□□□□ 0.77
CLN6-220ENST00000637450 SCARA3Q6AZY7 606 aa19.88■□□□□ 0.77
CLN6-220ENST00000637450 TXNDC11Q6PKC3 985 aa19.88■□□□□ 0.77
CLN6-220ENST00000637450 TMEM150AQ86TG1 271 aa19.88■□□□□ 0.77
CLN6-220ENST00000637450 PDCL2Q8N4E4 241 aa19.88■□□□□ 0.77
CLN6-220ENST00000637450 SPEM1Q8N4L4 309 aa19.88■□□□□ 0.77
CLN6-220ENST00000637450 LRRC52Q8N7C0 313 aa19.88■□□□□ 0.77
CLN6-220ENST00000637450 TTC8Q8TAM2 541 aa19.88■□□□□ 0.77
CLN6-220ENST00000637450 BPIFB1Q8TDL5 484 aa19.88■□□□□ 0.77
CLN6-220ENST00000637450 ACBD6Q9BR61 282 aa19.88■□□□□ 0.77
CLN6-220ENST00000637450 CBWD1Q9BRT8 395 aa19.88■□□□□ 0.77
CLN6-220ENST00000637450 TMEM206Q9H813 350 aa19.88■□□□□ 0.77
CLN6-220ENST00000637450 GTSE1Q9NYZ3 720 aa19.88■□□□□ 0.77
CLN6-220ENST00000637450 ZMYM5Q9UJ78 669 aa19.88■□□□□ 0.77
CLN6-220ENST00000637450 L1RE1Q9UN81 338 aa19.88■□□□□ 0.77
CLN6-220ENST00000637450 GOLGA8IPA6NC78 632 aa19.87■□□□□ 0.77
CLN6-220ENST00000637450 GOLGA8JA6NMD2 632 aa19.87■□□□□ 0.77
CLN6-220ENST00000637450 TULP1O00294 542 aaPredicted RBP19.87■□□□□ 0.77
CLN6-220ENST00000637450 PRPF6O94906 941 aaKnown RBP19.87■□□□□ 0.77
CLN6-220ENST00000637450 F11P03951 625 aa19.87■□□□□ 0.77
CLN6-220ENST00000637450 CTHP32929 405 aa19.87■□□□□ 0.77
CLN6-220ENST00000637450 NASPP49321 788 aaPredicted RBP19.87■□□□□ 0.77
CLN6-220ENST00000637450 SATB1Q01826 763 aa19.87■□□□□ 0.77
CLN6-220ENST00000637450 LRRC32Q14392 662 aa19.87■□□□□ 0.77
CLN6-220ENST00000637450 PUM1Q14671 1186 aaKnown RBP eCLIP19.87■□□□□ 0.77
CLN6-220ENST00000637450 NFE2Q16621 373 aaPredicted RBP19.87■□□□□ 0.77
CLN6-220ENST00000637450 DGKKQ5KSL6 1271 aa19.87■□□□□ 0.77
CLN6-220ENST00000637450 CMTM8Q8IZV2 173 aa19.87■□□□□ 0.77
CLN6-220ENST00000637450 TMEM86AQ8N2M4 240 aa19.87■□□□□ 0.77
CLN6-220ENST00000637450 CSGALNACT2Q8N6G5 542 aa19.87■□□□□ 0.77
CLN6-220ENST00000637450 GPR161Q8N6U8 529 aaKnown RBP19.87■□□□□ 0.77
CLN6-220ENST00000637450 CELF5Q8N6W0 485 aaKnown RBP19.87■□□□□ 0.77
CLN6-220ENST00000637450 PDILTQ8N807 584 aa19.87■□□□□ 0.77
CLN6-220ENST00000637450 PI4K2AQ9BTU6 479 aa19.87■□□□□ 0.77
CLN6-220ENST00000637450 PCIF1Q9H4Z3 704 aa19.87■□□□□ 0.77
CLN6-220ENST00000637450 PDE11AQ9HCR9 933 aa19.87■□□□□ 0.77
CLN6-220ENST00000637450 RBM12Q9NTZ6 932 aaKnown RBP19.87■□□□□ 0.77
CLN6-220ENST00000637450 ITGA11Q9UKX5 1188 aa19.87■□□□□ 0.77
CLN6-220ENST00000637450 ANK1P16157 1881 aa19.86■□□□□ 0.77
CLN6-220ENST00000637450 STX6O43752 255 aa19.86■□□□□ 0.77
CLN6-220ENST00000637450 HUS1O60921 280 aa19.86■□□□□ 0.77
CLN6-220ENST00000637450 NLRP12P59046 1061 aa19.86■□□□□ 0.77
CLN6-220ENST00000637450 RBP5P82980 135 aa19.86■□□□□ 0.77
CLN6-220ENST00000637450 TNK2Q07912 1038 aa19.86■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms