RNA–Protein interactions for RNA: ENST00000637212.1

LINC00643-207, long intergenic non-protein coding RNA 643, humanhuman

BASIC

Gene LINC00643, Length 734 nt, Biotype transcribed unitary pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00643-207ENST00000637212 PCDHGC3Q9UN70 934 aa14.25□□□□□ -0.13
LINC00643-207ENST00000637212 ZKSCAN5Q9Y2L8 839 aa14.25□□□□□ -0.13
LINC00643-207ENST00000637212 PCDHB12Q9Y5F1 795 aa14.25□□□□□ -0.13
LINC00643-207ENST00000637212 MKI67P46013 3256 aaKnown RBP14.25□□□□□ -0.13
LINC00643-207ENST00000637212 SCN5AQ14524 2016 aa14.25□□□□□ -0.13
LINC00643-207ENST00000637212 CEP290O15078 2479 aa14.24□□□□□ -0.13
LINC00643-207ENST00000637212 H7C4K7 107 aa14.24□□□□□ -0.13
LINC00643-207ENST00000637212 I3L4J1 428 aa14.24□□□□□ -0.13
LINC00643-207ENST00000637212 DDX3XO00571 662 aaKnown RBP eCLIP14.24□□□□□ -0.13
LINC00643-207ENST00000637212 THAP12O43422 761 aa14.24□□□□□ -0.13
LINC00643-207ENST00000637212 TLL1O43897 1013 aa14.24□□□□□ -0.13
LINC00643-207ENST00000637212 LSM8O95777 96 aaKnown RBP14.24□□□□□ -0.13
LINC00643-207ENST00000637212 PDGFRBP09619 1106 aa14.24□□□□□ -0.13
LINC00643-207ENST00000637212 PTPN1P18031 435 aaKnown RBP14.24□□□□□ -0.13
LINC00643-207ENST00000637212 FMO1Q01740 532 aa14.24□□□□□ -0.13
LINC00643-207ENST00000637212 YWHAHQ04917 246 aaPredicted RBP14.24□□□□□ -0.13
LINC00643-207ENST00000637212 SHHQ15465 462 aa14.24□□□□□ -0.13
LINC00643-207ENST00000637212 SGO2Q562F6 1265 aa14.24□□□□□ -0.13
LINC00643-207ENST00000637212 FAM171A1Q5VUB5 890 aa14.24□□□□□ -0.13
LINC00643-207ENST00000637212 ARHGAP17Q68EM7 881 aa14.24□□□□□ -0.13
LINC00643-207ENST00000637212 OVOS1Q6IE37 1185 aa14.24□□□□□ -0.13
LINC00643-207ENST00000637212 FUT10Q6P4F1 479 aa14.24□□□□□ -0.13
LINC00643-207ENST00000637212 LCLAT1Q6UWP7 414 aa14.24□□□□□ -0.13
LINC00643-207ENST00000637212 OSTM1Q86WC4 334 aa14.24□□□□□ -0.13
LINC00643-207ENST00000637212 GLYCTKQ8IVS8 523 aa14.24□□□□□ -0.13
LINC00643-207ENST00000637212 GPR65Q8IYL9 337 aa14.24□□□□□ -0.13
LINC00643-207ENST00000637212 SLC39A11Q8N1S5 342 aa14.24□□□□□ -0.13
LINC00643-207ENST00000637212 TXLNBQ8N3L3 684 aa14.24□□□□□ -0.13
LINC00643-207ENST00000637212 KIAA1524Q8TCG1 905 aa14.24□□□□□ -0.13
LINC00643-207ENST00000637212 HASPINQ8TF76 798 aa14.24□□□□□ -0.13
LINC00643-207ENST00000637212 SLC20A1Q8WUM9 679 aa14.24□□□□□ -0.13
LINC00643-207ENST00000637212 GDF15Q99988 308 aa14.24□□□□□ -0.13
LINC00643-207ENST00000637212 GPR62Q9BZJ7 368 aa14.24□□□□□ -0.13
LINC00643-207ENST00000637212 ZNF518BQ9C0D4 1074 aa14.24□□□□□ -0.13
LINC00643-207ENST00000637212 LHX5Q9H2C1 402 aa14.24□□□□□ -0.13
LINC00643-207ENST00000637212 ACP6Q9NPH0 428 aa14.24□□□□□ -0.13
LINC00643-207ENST00000637212 PUF60Q9UHX1 559 aaKnown RBP14.24□□□□□ -0.13
LINC00643-207ENST00000637212 NAGPAQ9UK23 515 aa14.24□□□□□ -0.13
LINC00643-207ENST00000637212 RWDD3Q9Y3V2 267 aa14.24□□□□□ -0.13
LINC00643-207ENST00000637212 ADGRG1Q9Y653 693 aa14.24□□□□□ -0.13
LINC00643-207ENST00000637212 ANK1P16157 1881 aa14.24□□□□□ -0.13
LINC00643-207ENST00000637212 CITO14578 2027 aa14.24□□□□□ -0.13
LINC00643-207ENST00000637212 A0A087X0T9 212 aa14.23□□□□□ -0.13
LINC00643-207ENST00000637212 OR6C75A6NL08 312 aa14.23□□□□□ -0.13
LINC00643-207ENST00000637212 NT5C1B-RDH14C9J2C7 533 aa14.23□□□□□ -0.13
LINC00643-207ENST00000637212 F8W810 466 aa14.23□□□□□ -0.13
LINC00643-207ENST00000637212 CCP110O43303 1012 aa14.23□□□□□ -0.13
LINC00643-207ENST00000637212 ZSCAN12O43309 604 aa14.23□□□□□ -0.13
LINC00643-207ENST00000637212 CYP1A1P04798 512 aaPredicted RBP14.23□□□□□ -0.13
LINC00643-207ENST00000637212 MMEP08473 750 aa14.23□□□□□ -0.13
LINC00643-207ENST00000637212 FAM228BP0C875 321 aa14.23□□□□□ -0.13
LINC00643-207ENST00000637212 CD19P15391 556 aa14.23□□□□□ -0.13
LINC00643-207ENST00000637212 KCNA4P22459 653 aa14.23□□□□□ -0.13
LINC00643-207ENST00000637212 BMP8BP34820 402 aa14.23□□□□□ -0.13
LINC00643-207ENST00000637212 PLCB3Q01970 1234 aa14.23□□□□□ -0.13
LINC00643-207ENST00000637212 KRT17Q04695 432 aa14.23□□□□□ -0.13
LINC00643-207ENST00000637212 MTF1Q14872 753 aa14.23□□□□□ -0.13
LINC00643-207ENST00000637212 MAPRE1Q15691 268 aaKnown RBP14.23□□□□□ -0.13
LINC00643-207ENST00000637212 USP41Q3LFD5 358 aa14.23□□□□□ -0.13
LINC00643-207ENST00000637212 C9orf50Q5SZB4 431 aa14.23□□□□□ -0.13
LINC00643-207ENST00000637212 ALKBH5Q6P6C2 394 aaKnown RBP14.23□□□□□ -0.13
LINC00643-207ENST00000637212 FAM171BQ6P995 826 aa14.23□□□□□ -0.13
LINC00643-207ENST00000637212 ZNF662Q6ZS27 426 aa14.23□□□□□ -0.13
LINC00643-207ENST00000637212 ANKS3Q6ZW76 656 aa14.23□□□□□ -0.13
LINC00643-207ENST00000637212 DDX53Q86TM3 631 aaKnown RBP14.23□□□□□ -0.13
LINC00643-207ENST00000637212 ACOT1Q86TX2 421 aa14.23□□□□□ -0.13
LINC00643-207ENST00000637212 GPIHBP1Q8IV16 184 aa14.23□□□□□ -0.13
LINC00643-207ENST00000637212 RNF168Q8IYW5 571 aaPredicted RBP14.23□□□□□ -0.13
LINC00643-207ENST00000637212 B3GALNT2Q8NCR0 500 aa14.23□□□□□ -0.13
LINC00643-207ENST00000637212 LNX1Q8TBB1 728 aaPredicted RBP14.23□□□□□ -0.13
LINC00643-207ENST00000637212 TFAP2BQ92481 460 aa14.23□□□□□ -0.13
LINC00643-207ENST00000637212 RNPC3Q96LT9 517 aaKnown RBP14.23□□□□□ -0.13
LINC00643-207ENST00000637212 TTPALQ9BTX7 342 aa14.23□□□□□ -0.13
LINC00643-207ENST00000637212 UBE2OQ9C0C9 1292 aaKnown RBP14.23□□□□□ -0.13
LINC00643-207ENST00000637212 PDCL3Q9H2J4 239 aa14.23□□□□□ -0.13
LINC00643-207ENST00000637212 HCSTQ9UBK5 93 aa14.23□□□□□ -0.13
LINC00643-207ENST00000637212 HMGXB4Q9UGU5 601 aa14.23□□□□□ -0.13
LINC00643-207ENST00000637212 INTUQ9ULD6 942 aa14.23□□□□□ -0.13
LINC00643-207ENST00000637212 PYCARDQ9ULZ3 195 aa14.23□□□□□ -0.13
LINC00643-207ENST00000637212 NENFQ9UMX5 172 aa14.23□□□□□ -0.13
LINC00643-207ENST00000637212 NME7Q9Y5B8 376 aa14.23□□□□□ -0.13
LINC00643-207ENST00000637212 PCDHA13Q9Y5I0 950 aa14.23□□□□□ -0.13
LINC00643-207ENST00000637212 TIMM13Q9Y5L4 95 aaPredicted RBP14.23□□□□□ -0.13
LINC00643-207ENST00000637212 O00370 1275 aa14.22□□□□□ -0.13
LINC00643-207ENST00000637212 RTN2O75298 545 aa14.22□□□□□ -0.13
LINC00643-207ENST00000637212 CCDC175P0C221 793 aa14.22□□□□□ -0.13
LINC00643-207ENST00000637212 BRD2P25440 801 aaKnown RBP14.22□□□□□ -0.13
LINC00643-207ENST00000637212 CDH5P33151 784 aaPredicted RBP14.22□□□□□ -0.13
LINC00643-207ENST00000637212 BMPR1AP36894 532 aa14.22□□□□□ -0.13
LINC00643-207ENST00000637212 MAGEA1P43355 309 aa14.22□□□□□ -0.13
LINC00643-207ENST00000637212 GFPT1Q06210 699 aaPredicted RBP14.22□□□□□ -0.13
LINC00643-207ENST00000637212 CLEC16AQ2KHT3 1053 aa14.22□□□□□ -0.13
LINC00643-207ENST00000637212 CCDC122Q5T0U0 273 aa14.22□□□□□ -0.13
LINC00643-207ENST00000637212 TAF3Q5VWG9 929 aa14.22□□□□□ -0.13
LINC00643-207ENST00000637212 ACAD10Q6JQN1 1059 aa14.22□□□□□ -0.13
LINC00643-207ENST00000637212 TOGARAM2Q6ZUX3 1019 aa14.22□□□□□ -0.13
LINC00643-207ENST00000637212 ZSCAN30Q86W11 494 aa14.22□□□□□ -0.13
LINC00643-207ENST00000637212 TMEM35BQ8NCS4 154 aa14.22□□□□□ -0.13
LINC00643-207ENST00000637212 OLIG1Q8TAK6 271 aa14.22□□□□□ -0.13
LINC00643-207ENST00000637212 BCL7CQ8WUZ0 217 aaPredicted RBP14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms