RNA–Protein interactions for RNA: ENST00000637033.1

CHRNA7-223, Transcript of cholinergic receptor nicotinic alpha 7 subunit, human

TSL 5 BASIC

Gene CHRNA7, Length 3,204 nt, Biotype protein coding, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CHRNA7-223	ENST00000637033	RBAK	Q9NYW8	714 aa	Predicted RBP	13.72	□□□□□ -0.21
CHRNA7-223	ENST00000637033	ZNF70	Q9UC06	446 aa	Predicted RBP	13.72	□□□□□ -0.21
CHRNA7-223	ENST00000637033	FBXO40	Q9UH90	709 aa		13.72	□□□□□ -0.21
CHRNA7-223	ENST00000637033	SEC23IP	Q9Y6Y8	1000 aa	Known RBP	13.72	□□□□□ -0.21
CHRNA7-223	ENST00000637033	FAM237B	A0A1B0GVD1	139 aa		13.72	□□□□□ -0.21
CHRNA7-223	ENST00000637033	CST8	O60676	142 aa		13.72	□□□□□ -0.21
CHRNA7-223	ENST00000637033	TOP3B	O95985	862 aa	Known RBP	13.72	□□□□□ -0.21
CHRNA7-223	ENST00000637033	ZNF252P-AS1	Q0IIN9	211 aa		13.72	□□□□□ -0.21
CHRNA7-223	ENST00000637033	NPNT	Q6UXI9	565 aa		13.72	□□□□□ -0.21
CHRNA7-223	ENST00000637033	ALYREF	Q86V81	257 aa	Known RBP	13.72	□□□□□ -0.21
CHRNA7-223	ENST00000637033	DENND1A	Q8TEH3	1009 aa		13.72	□□□□□ -0.21
CHRNA7-223	ENST00000637033	ZNF606	Q8WXB4	792 aa		13.72	□□□□□ -0.21
CHRNA7-223	ENST00000637033	MCUR1	Q96AQ8	359 aa		13.72	□□□□□ -0.21
CHRNA7-223	ENST00000637033	PAFAH2	Q99487	392 aa		13.72	□□□□□ -0.21
CHRNA7-223	ENST00000637033	CALN1	Q9BXU9	219 aa		13.72	□□□□□ -0.21
CHRNA7-223	ENST00000637033	CADM1	Q9BY67	442 aa	Known RBP	13.72	□□□□□ -0.21
CHRNA7-223	ENST00000637033	ZNF277	Q9NRM2	450 aa	Predicted RBP	13.72	□□□□□ -0.21
CHRNA7-223	ENST00000637033	ZFAT	Q9P243	1243 aa		13.72	□□□□□ -0.21
CHRNA7-223	ENST00000637033	AGO2	Q9UKV8	859 aa	Known RBP	13.72	□□□□□ -0.21
CHRNA7-223	ENST00000637033	ATRNL1	Q5VV63	1379 aa		13.72	□□□□□ -0.21
CHRNA7-223	ENST00000637033	COL24A1	Q17RW2	1714 aa		13.72	□□□□□ -0.21
CHRNA7-223	ENST00000637033	E2F8	A0AVK6	867 aa		13.71	□□□□□ -0.21
CHRNA7-223	ENST00000637033	WDR64	B1ANS9	1081 aa		13.71	□□□□□ -0.21
CHRNA7-223	ENST00000637033	MAPT	P10636	758 aa	Known RBP	13.71	□□□□□ -0.21
CHRNA7-223	ENST00000637033	ATP4A	P20648	1035 aa		13.71	□□□□□ -0.21
CHRNA7-223	ENST00000637033	OTUD4	Q01804	1114 aa	Known RBP	13.71	□□□□□ -0.21
CHRNA7-223	ENST00000637033	KDSR	Q06136	332 aa		13.71	□□□□□ -0.21
CHRNA7-223	ENST00000637033	CUL2	Q13617	745 aa		13.71	□□□□□ -0.21
CHRNA7-223	ENST00000637033	PDK4	Q16654	411 aa		13.71	□□□□□ -0.21
CHRNA7-223	ENST00000637033	RAB6C	Q53S08	254 aa		13.71	□□□□□ -0.21
CHRNA7-223	ENST00000637033	CENPU	Q71F23	418 aa		13.71	□□□□□ -0.21
CHRNA7-223	ENST00000637033	IGDCC3	Q8IVU1	814 aa		13.71	□□□□□ -0.21
CHRNA7-223	ENST00000637033	CCDC60	Q8IWA6	550 aa	Predicted RBP	13.71	□□□□□ -0.21
CHRNA7-223	ENST00000637033	SHKBP1	Q8TBC3	707 aa		13.71	□□□□□ -0.21
CHRNA7-223	ENST00000637033	ZNF526	Q8TF50	670 aa	Predicted RBP	13.71	□□□□□ -0.21
CHRNA7-223	ENST00000637033	PPP1R16B	Q96T49	567 aa		13.71	□□□□□ -0.21
CHRNA7-223	ENST00000637033	RAB6C	Q9H0N0	254 aa		13.71	□□□□□ -0.21
CHRNA7-223	ENST00000637033	LGALS13	Q9UHV8	139 aa		13.71	□□□□□ -0.21
CHRNA7-223	ENST00000637033	GYG2	O15488	501 aa		13.71	□□□□□ -0.21
CHRNA7-223	ENST00000637033	CLUH	O75153	1309 aa		13.71	□□□□□ -0.21
CHRNA7-223	ENST00000637033	RAP1GAP	P47736	663 aa		13.71	□□□□□ -0.21
CHRNA7-223	ENST00000637033	YWHAG	P61981	247 aa	Known RBP eCLIP	13.71	□□□□□ -0.21
CHRNA7-223	ENST00000637033	DNAJC24	Q6P3W2	148 aa		13.71	□□□□□ -0.21
CHRNA7-223	ENST00000637033	SPOCD1	Q6ZMY3	1216 aa		13.71	□□□□□ -0.21
CHRNA7-223	ENST00000637033	EEPD1	Q7L9B9	569 aa		13.71	□□□□□ -0.21
CHRNA7-223	ENST00000637033	CLNK	Q7Z7G1	428 aa		13.71	□□□□□ -0.21
CHRNA7-223	ENST00000637033	ABRA	Q8N0Z2	381 aa		13.71	□□□□□ -0.21
CHRNA7-223	ENST00000637033	ARMC2	Q8NEN0	867 aa		13.71	□□□□□ -0.21
CHRNA7-223	ENST00000637033	MAIP1	Q8WWC4	291 aa		13.71	□□□□□ -0.21
CHRNA7-223	ENST00000637033	SLCO2A1	Q92959	643 aa		13.71	□□□□□ -0.21
CHRNA7-223	ENST00000637033	CFAP36	Q96G28	342 aa		13.71	□□□□□ -0.21
CHRNA7-223	ENST00000637033	MFSD14A	Q96MC6	490 aa		13.71	□□□□□ -0.21
CHRNA7-223	ENST00000637033	SENP7	Q9BQF6	1050 aa		13.71	□□□□□ -0.21
CHRNA7-223	ENST00000637033	LRMDA	Q9H2I8	198 aa		13.71	□□□□□ -0.21
CHRNA7-223	ENST00000637033	XPNPEP1	Q9NQW7	623 aa		13.71	□□□□□ -0.21
CHRNA7-223	ENST00000637033	KANSL3	Q9P2N6	904 aa		13.71	□□□□□ -0.21
CHRNA7-223	ENST00000637033	STARD13	Q9Y3M8	1113 aa		13.71	□□□□□ -0.21
CHRNA7-223	ENST00000637033	WASF2	Q9Y6W5	498 aa		13.71	□□□□□ -0.21
CHRNA7-223	ENST00000637033	CAPN9	O14815	690 aa		13.71	□□□□□ -0.22
CHRNA7-223	ENST00000637033	GRAP2	O75791	330 aa		13.71	□□□□□ -0.22
CHRNA7-223	ENST00000637033	AP1G2	O75843	785 aa		13.71	□□□□□ -0.22
CHRNA7-223	ENST00000637033	EDN1	P05305	212 aa		13.71	□□□□□ -0.22
CHRNA7-223	ENST00000637033	UBTFL6	P0CB48	400 aa	Predicted RBP	13.71	□□□□□ -0.22
CHRNA7-223	ENST00000637033	ZCCHC18	P0CG32	403 aa		13.71	□□□□□ -0.22
CHRNA7-223	ENST00000637033	SLC1A1	P43005	524 aa		13.71	□□□□□ -0.22
CHRNA7-223	ENST00000637033	YARS	P54577	528 aa	Known RBP	13.71	□□□□□ -0.22
CHRNA7-223	ENST00000637033	CAV1	Q03135	178 aa		13.71	□□□□□ -0.22
CHRNA7-223	ENST00000637033	CENPC	Q03188	943 aa		13.71	□□□□□ -0.22
CHRNA7-223	ENST00000637033	MKRN3	Q13064	507 aa	Known RBP	13.71	□□□□□ -0.22
CHRNA7-223	ENST00000637033	FYB2	Q5VWT5	728 aa		13.71	□□□□□ -0.22
CHRNA7-223	ENST00000637033	UNC45B	Q8IWX7	931 aa		13.71	□□□□□ -0.22
CHRNA7-223	ENST00000637033	DNAJC9	Q8WXX5	260 aa		13.71	□□□□□ -0.22
CHRNA7-223	ENST00000637033	EURL	Q9NYK6	297 aa		13.71	□□□□□ -0.22
CHRNA7-223	ENST00000637033	COQ4	Q9Y3A0	265 aa		13.71	□□□□□ -0.22
CHRNA7-223	ENST00000637033	TJP3	O95049	919 aa		13.7	□□□□□ -0.22
CHRNA7-223	ENST00000637033	BAG2	O95816	211 aa		13.7	□□□□□ -0.22
CHRNA7-223	ENST00000637033	ICAM1	P05362	532 aa		13.7	□□□□□ -0.22
CHRNA7-223	ENST00000637033	MAN1A1	P33908	653 aa		13.7	□□□□□ -0.22
CHRNA7-223	ENST00000637033	BLMH	Q13867	455 aa		13.7	□□□□□ -0.22
CHRNA7-223	ENST00000637033	BMPR2	Q13873	1038 aa		13.7	□□□□□ -0.22
CHRNA7-223	ENST00000637033	MYBPC2	Q14324	1141 aa		13.7	□□□□□ -0.22
CHRNA7-223	ENST00000637033	CDO1	Q16878	200 aa		13.7	□□□□□ -0.22
CHRNA7-223	ENST00000637033	GPAT2	Q6NUI2	795 aa		13.7	□□□□□ -0.22
CHRNA7-223	ENST00000637033	RINL	Q6ZS11	566 aa		13.7	□□□□□ -0.22
CHRNA7-223	ENST00000637033	OGFOD1	Q8N543	542 aa		13.7	□□□□□ -0.22
CHRNA7-223	ENST00000637033	NETO2	Q8NC67	525 aa		13.7	□□□□□ -0.22
CHRNA7-223	ENST00000637033	HIPK4	Q8NE63	616 aa		13.7	□□□□□ -0.22
CHRNA7-223	ENST00000637033	ZNF483	Q8TF39	744 aa	Predicted RBP	13.7	□□□□□ -0.22
CHRNA7-223	ENST00000637033	RSAD2	Q8WXG1	361 aa		13.7	□□□□□ -0.22
CHRNA7-223	ENST00000637033	MSTO1	Q9BUK6	570 aa		13.7	□□□□□ -0.22
CHRNA7-223	ENST00000637033	PIH1D1	Q9NWS0	290 aa	Known RBP	13.7	□□□□□ -0.22
CHRNA7-223	ENST00000637033	NMRK1	Q9NWW6	199 aa		13.7	□□□□□ -0.22
CHRNA7-223	ENST00000637033		E5RJQ4	531 aa		13.7	□□□□□ -0.22
CHRNA7-223	ENST00000637033		H0YIN7	160 aa		13.7	□□□□□ -0.22
CHRNA7-223	ENST00000637033	CYB561D2	O14569	222 aa		13.7	□□□□□ -0.22
CHRNA7-223	ENST00000637033	CSDE1	O75534	798 aa	Known RBP	13.7	□□□□□ -0.22
CHRNA7-223	ENST00000637033	DCTN3	O75935	186 aa		13.7	□□□□□ -0.22
CHRNA7-223	ENST00000637033	ITGBL1	O95965	494 aa	Predicted RBP	13.7	□□□□□ -0.22
CHRNA7-223	ENST00000637033	ENO1	P06733	434 aa	Known RBP	13.7	□□□□□ -0.22
CHRNA7-223	ENST00000637033	PYGB	P11216	843 aa		13.7	□□□□□ -0.22

Retrieved 100 of 20,778 RNA–protein pairs in 34 ms