RNA–Protein interactions for RNA: ENST00000635751.1

CLN8-208, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLN8, Length 1,807 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-208ENST00000635751 LRFN2Q9ULH4 789 aa21.25■□□□□ 0.99
CLN8-208ENST00000635751 PTPRSQ13332 1948 aa21.24■□□□□ 0.99
CLN8-208ENST00000635751 CCDC66A2RUB6 948 aa21.24■□□□□ 0.99
CLN8-208ENST00000635751 POMCP01189 267 aa21.24■□□□□ 0.99
CLN8-208ENST00000635751 THP07101 528 aa21.24■□□□□ 0.99
CLN8-208ENST00000635751 TMEM253P0C7T8 217 aa21.24■□□□□ 0.99
CLN8-208ENST00000635751 MRPS25P82663 173 aaKnown RBP21.24■□□□□ 0.99
CLN8-208ENST00000635751 FPGSQ05932 587 aa21.24■□□□□ 0.99
CLN8-208ENST00000635751 PPIGQ13427 754 aaKnown RBP eCLIP21.24■□□□□ 0.99
CLN8-208ENST00000635751 TRPC3Q13507 836 aa21.24■□□□□ 0.99
CLN8-208ENST00000635751 CLLU1OSQ5K130 101 aa21.24■□□□□ 0.99
CLN8-208ENST00000635751 PEX26Q7Z412 305 aa21.24■□□□□ 0.99
CLN8-208ENST00000635751 ACTRT1Q8TDG2 376 aa21.24■□□□□ 0.99
CLN8-208ENST00000635751 CAVIN3Q969G5 261 aa21.24■□□□□ 0.99
CLN8-208ENST00000635751 HINFPQ9BQA5 517 aa21.24■□□□□ 0.99
CLN8-208ENST00000635751 GDF3Q9NR23 364 aa21.24■□□□□ 0.99
CLN8-208ENST00000635751 ABHD14A-ACY1A0A1B0GW23 586 aa21.23■□□□□ 0.99
CLN8-208ENST00000635751 RNF40O75150 1001 aa21.23■□□□□ 0.99
CLN8-208ENST00000635751 TNFAIP3P21580 790 aa21.23■□□□□ 0.99
CLN8-208ENST00000635751 MYL6P60660 151 aa21.23■□□□□ 0.99
CLN8-208ENST00000635751 SOX4Q06945 474 aaPredicted RBP21.23■□□□□ 0.99
CLN8-208ENST00000635751 ARHGAP44Q17R89 818 aa21.23■□□□□ 0.99
CLN8-208ENST00000635751 CRIPAKQ8N1N5 446 aa21.23■□□□□ 0.99
CLN8-208ENST00000635751 CXorf38Q8TB03 319 aa21.23■□□□□ 0.99
CLN8-208ENST00000635751 ZBTB9Q96C00 473 aa21.23■□□□□ 0.99
CLN8-208ENST00000635751 GOLGA2P5Q9HBQ8 144 aa21.23■□□□□ 0.99
CLN8-208ENST00000635751 TMEM59LQ9UK28 342 aa21.23■□□□□ 0.99
CLN8-208ENST00000635751 STXBP5LQ9Y2K9 1186 aa21.23■□□□□ 0.99
CLN8-208ENST00000635751 GOLGA6BA6NDN3 693 aa21.22■□□□□ 0.99
CLN8-208ENST00000635751 XPOTO43592 962 aaKnown RBP21.22■□□□□ 0.99
CLN8-208ENST00000635751 POLR2BP30876 1174 aaKnown RBP21.22■□□□□ 0.99
CLN8-208ENST00000635751 NNTQ13423 1086 aa21.22■□□□□ 0.99
CLN8-208ENST00000635751 GLB1LQ6UWU2 654 aa21.22■□□□□ 0.99
CLN8-208ENST00000635751 OTOP2Q7RTS6 562 aa21.22■□□□□ 0.99
CLN8-208ENST00000635751 DAAM2Q86T65 1068 aa21.22■□□□□ 0.99
CLN8-208ENST00000635751 CTNNBL1Q8WYA6 563 aaPredicted RBP21.22■□□□□ 0.99
CLN8-208ENST00000635751 RFFLQ8WZ73 363 aa21.22■□□□□ 0.99
CLN8-208ENST00000635751 KRT12Q99456 494 aa21.22■□□□□ 0.99
CLN8-208ENST00000635751 GOLPH3Q9H4A6 298 aa21.22■□□□□ 0.99
CLN8-208ENST00000635751 ITGA11Q9UKX5 1188 aa21.22■□□□□ 0.99
CLN8-208ENST00000635751 AGAP1Q9UPQ3 857 aa21.22■□□□□ 0.99
CLN8-208ENST00000635751 CLSTN1O94985 981 aa21.22■□□□□ 0.99
CLN8-208ENST00000635751 HEXIM1O94992 359 aaKnown RBP21.22■□□□□ 0.99
CLN8-208ENST00000635751 UPP2O95045 317 aa21.22■□□□□ 0.99
CLN8-208ENST00000635751 SPOPLQ6IQ16 392 aa21.22■□□□□ 0.99
CLN8-208ENST00000635751 TATDN2Q93075 761 aa21.22■□□□□ 0.99
CLN8-208ENST00000635751 UBE2TQ9NPD8 197 aaPredicted RBP21.22■□□□□ 0.99
CLN8-208ENST00000635751 TMCO5BA8MYB1 307 aa21.21■□□□□ 0.99
CLN8-208ENST00000635751 FOXN3O00409 490 aaPredicted RBP21.21■□□□□ 0.99
CLN8-208ENST00000635751 CEP104O60308 925 aa21.21■□□□□ 0.99
CLN8-208ENST00000635751 GLI1P08151 1106 aa21.21■□□□□ 0.99
CLN8-208ENST00000635751 CYP3A5P20815 502 aa21.21■□□□□ 0.99
CLN8-208ENST00000635751 GGCXP38435 758 aa21.21■□□□□ 0.99
CLN8-208ENST00000635751 LMAN1P49257 510 aa21.21■□□□□ 0.99
CLN8-208ENST00000635751 GATMP50440 423 aa21.21■□□□□ 0.99
CLN8-208ENST00000635751 WDR44Q5JSH3 913 aa21.21■□□□□ 0.99
CLN8-208ENST00000635751 ZNF365Q70YC5 407 aa21.21■□□□□ 0.99
CLN8-208ENST00000635751 NT5DC3Q86UY8 548 aa21.21■□□□□ 0.99
CLN8-208ENST00000635751 NPAS4Q8IUM7 802 aa21.21■□□□□ 0.99
CLN8-208ENST00000635751 ARHGEF19Q8IW93 802 aa21.21■□□□□ 0.99
CLN8-208ENST00000635751 CALR3Q96L12 384 aaKnown RBP21.21■□□□□ 0.99
CLN8-208ENST00000635751 SLC38A7Q9NVC3 462 aa21.21■□□□□ 0.99
CLN8-208ENST00000635751 PGRMC1O00264 195 aaKnown RBP21.2■□□□□ 0.98
CLN8-208ENST00000635751 PPEF2O14830 753 aa21.2■□□□□ 0.98
CLN8-208ENST00000635751 INPPL1O15357 1258 aa21.2■□□□□ 0.98
CLN8-208ENST00000635751 FGBP02675 491 aa21.2■□□□□ 0.98
CLN8-208ENST00000635751 RNASE9P60153 205 aaKnown RBP21.2■□□□□ 0.98
CLN8-208ENST00000635751 RBP5P82980 135 aa21.2■□□□□ 0.98
CLN8-208ENST00000635751 SGSM1Q2NKQ1 1148 aa21.2■□□□□ 0.98
CLN8-208ENST00000635751 NOMO2Q5JPE7 1267 aa21.2■□□□□ 0.98
CLN8-208ENST00000635751 GOLGA6L1Q8N7Z2 621 aa21.2■□□□□ 0.98
CLN8-208ENST00000635751 SLC35G2Q8TBE7 412 aa21.2■□□□□ 0.98
CLN8-208ENST00000635751 NT5C1BQ96P26 610 aa21.2■□□□□ 0.98
CLN8-208ENST00000635751 AGPAT1Q99943 283 aa21.2■□□□□ 0.98
CLN8-208ENST00000635751 IMPG2Q9BZV3 1241 aa21.2■□□□□ 0.98
CLN8-208ENST00000635751 CACNG4Q9UBN1 327 aa21.2■□□□□ 0.98
CLN8-208ENST00000635751 EFCAB14O75071 495 aa21.2■□□□□ 0.98
CLN8-208ENST00000635751 ASS1P00966 412 aaKnown RBP21.2■□□□□ 0.98
CLN8-208ENST00000635751 WDR5P61964 334 aaKnown RBP21.2■□□□□ 0.98
CLN8-208ENST00000635751 DEFB103AP81534 67 aa21.2■□□□□ 0.98
CLN8-208ENST00000635751 GUCY2DQ02846 1103 aa21.2■□□□□ 0.98
CLN8-208ENST00000635751 GRIK3Q13003 919 aa21.2■□□□□ 0.98
CLN8-208ENST00000635751 C9orf57Q5W0N0 161 aa21.2■□□□□ 0.98
CLN8-208ENST00000635751 ABI1Q8IZP0 508 aa21.2■□□□□ 0.98
CLN8-208ENST00000635751 HES6Q96HZ4 224 aa21.2■□□□□ 0.98
CLN8-208ENST00000635751 BUD13Q9BRD0 619 aaKnown RBP eCLIP21.2■□□□□ 0.985e-8■■■■□ 21.4
CLN8-208ENST00000635751 XYLT2Q9H1B5 865 aa21.2■□□□□ 0.98
CLN8-208ENST00000635751 FAM204AQ9H8W3 233 aa21.2■□□□□ 0.98
CLN8-208ENST00000635751 APOBEC3GQ9HC16 384 aaKnown RBP21.2■□□□□ 0.98
CLN8-208ENST00000635751 EPB41L5Q9HCM4 733 aa21.2■□□□□ 0.98
CLN8-208ENST00000635751 SEPT11Q9NVA2 429 aaKnown RBP21.2■□□□□ 0.98
CLN8-208ENST00000635751 AMFRQ9UKV5 643 aa21.2■□□□□ 0.98
CLN8-208ENST00000635751 NUB1Q9Y5A7 615 aa21.2■□□□□ 0.98
CLN8-208ENST00000635751 AGPSO00116 658 aa21.19■□□□□ 0.98
CLN8-208ENST00000635751 ZC3H11AO75152 810 aaKnown RBP eCLIP21.19■□□□□ 0.98
CLN8-208ENST00000635751 BAIAP3O94812 1187 aa21.19■□□□□ 0.98
CLN8-208ENST00000635751 NOP14P78316 857 aaKnown RBP21.19■□□□□ 0.98
CLN8-208ENST00000635751 ZNF699Q32M78 642 aa21.19■□□□□ 0.98
CLN8-208ENST00000635751 TMCO2Q7Z6W1 182 aaPredicted RBP21.19■□□□□ 0.98
CLN8-208ENST00000635751 PPM1KQ8N3J5 372 aa21.19■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms