RNA–Protein interactions for RNA: ENST00000628646.2

SYNGAP1-207, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5 BASIC

Gene SYNGAP1, Length 4,264 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-207ENST00000628646 CTXN3Q4LDR2 81 aa13.22□□□□□ -0.29
SYNGAP1-207ENST00000628646 TAS1R3Q7RTX0 852 aa13.22□□□□□ -0.29
SYNGAP1-207ENST00000628646 NT5DC4Q86YG4 428 aa13.22□□□□□ -0.29
SYNGAP1-207ENST00000628646 SPATA4Q8NEY3 305 aa13.22□□□□□ -0.29
SYNGAP1-207ENST00000628646 DMGDHQ9UI17 866 aaKnown RBP13.22□□□□□ -0.29
SYNGAP1-207ENST00000628646 CPSF3Q9UKF6 684 aaKnown RBP13.22□□□□□ -0.29
SYNGAP1-207ENST00000628646 HPCAL4Q9UM19 191 aa13.22□□□□□ -0.29
SYNGAP1-207ENST00000628646 P4HA2O15460 535 aa13.22□□□□□ -0.29
SYNGAP1-207ENST00000628646 CYP26A1O43174 497 aa13.22□□□□□ -0.29
SYNGAP1-207ENST00000628646 ZMYND10O75800 440 aa13.22□□□□□ -0.29
SYNGAP1-207ENST00000628646 PON1P27169 355 aa13.22□□□□□ -0.29
SYNGAP1-207ENST00000628646 GNA15P30679 374 aa13.22□□□□□ -0.29
SYNGAP1-207ENST00000628646 SPATA2LQ8IUW3 424 aaPredicted RBP13.22□□□□□ -0.29
SYNGAP1-207ENST00000628646 RIN2Q8WYP3 895 aaPredicted RBP13.22□□□□□ -0.29
SYNGAP1-207ENST00000628646 DHX38Q92620 1227 aaKnown RBP13.22□□□□□ -0.29
SYNGAP1-207ENST00000628646 CRISPLD2Q9H0B8 497 aa13.22□□□□□ -0.29
SYNGAP1-207ENST00000628646 CWC15Q9P013 229 aaKnown RBP13.22□□□□□ -0.29
SYNGAP1-207ENST00000628646 UCHL3P15374 230 aa13.22□□□□□ -0.29
SYNGAP1-207ENST00000628646 GTF2H1P32780 548 aa13.22□□□□□ -0.29
SYNGAP1-207ENST00000628646 GATMP50440 423 aa13.22□□□□□ -0.29
SYNGAP1-207ENST00000628646 CBWD6Q4V339 395 aa13.22□□□□□ -0.29
SYNGAP1-207ENST00000628646 CBWD3Q5JTY5 395 aa13.22□□□□□ -0.29
SYNGAP1-207ENST00000628646 CBWD5Q5RIA9 395 aa13.22□□□□□ -0.29
SYNGAP1-207ENST00000628646 CCSAPQ6IQ19 270 aaPredicted RBP13.22□□□□□ -0.29
SYNGAP1-207ENST00000628646 ENOSF1Q7L5Y1 443 aa13.22□□□□□ -0.29
SYNGAP1-207ENST00000628646 PHLDB2Q86SQ0 1253 aa13.22□□□□□ -0.29
SYNGAP1-207ENST00000628646 GSPT2Q8IYD1 628 aaKnown RBP13.22□□□□□ -0.29
SYNGAP1-207ENST00000628646 ADGRF2Q8IZF7 708 aa13.22□□□□□ -0.29
SYNGAP1-207ENST00000628646 TTC39CQ8N584 583 aa13.22□□□□□ -0.29
SYNGAP1-207ENST00000628646 C2CD2Q9Y426 696 aa13.22□□□□□ -0.29
SYNGAP1-207ENST00000628646 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.22□□□□□ -0.29
SYNGAP1-207ENST00000628646 TRIOBPQ9H2D6 2365 aa13.22□□□□□ -0.29
SYNGAP1-207ENST00000628646 KPNA7A9QM74 516 aa13.22□□□□□ -0.29
SYNGAP1-207ENST00000628646 NFIL3Q16649 462 aa13.22□□□□□ -0.29
SYNGAP1-207ENST00000628646 OVOS1Q6IE37 1185 aa13.22□□□□□ -0.29
SYNGAP1-207ENST00000628646 LEKR1Q6ZMV7 388 aa13.22□□□□□ -0.29
SYNGAP1-207ENST00000628646 ANKRD33Q7Z3H0 272 aa13.22□□□□□ -0.29
SYNGAP1-207ENST00000628646 SENP8Q96LD8 212 aa13.22□□□□□ -0.29
SYNGAP1-207ENST00000628646 LRRC1Q9BTT6 524 aa13.22□□□□□ -0.29
SYNGAP1-207ENST00000628646 NT5C1AQ9BXI3 368 aa13.22□□□□□ -0.29
SYNGAP1-207ENST00000628646 ABI2Q9NYB9 513 aaPredicted RBP13.22□□□□□ -0.29
SYNGAP1-207ENST00000628646 CTTNBP2NLQ9P2B4 639 aa13.22□□□□□ -0.29
SYNGAP1-207ENST00000628646 CACNG4Q9UBN1 327 aa13.22□□□□□ -0.29
SYNGAP1-207ENST00000628646 MAGED2Q9UNF1 606 aaPredicted RBP13.22□□□□□ -0.29
SYNGAP1-207ENST00000628646 SQORQ9Y6N5 450 aa13.22□□□□□ -0.29
SYNGAP1-207ENST00000628646 GOLGA8SH3BPF8 625 aa13.21□□□□□ -0.29
SYNGAP1-207ENST00000628646 RFX1P22670 979 aa13.21□□□□□ -0.29
SYNGAP1-207ENST00000628646 YWHAHQ04917 246 aaPredicted RBP13.21□□□□□ -0.29
SYNGAP1-207ENST00000628646 SLC39A4Q6P5W5 647 aa13.21□□□□□ -0.29
SYNGAP1-207ENST00000628646 ZNF571Q7Z3V5 609 aaPredicted RBP13.21□□□□□ -0.29
SYNGAP1-207ENST00000628646 C12orf56Q8IXR9 622 aa13.21□□□□□ -0.29
SYNGAP1-207ENST00000628646 SIX6OS1Q8N1H7 587 aa13.21□□□□□ -0.29
SYNGAP1-207ENST00000628646 PPM1EQ8WY54 764 aa13.21□□□□□ -0.29
SYNGAP1-207ENST00000628646 TATDN2Q93075 761 aa13.21□□□□□ -0.29
SYNGAP1-207ENST00000628646 SEPT5Q99719 369 aaPredicted RBP13.21□□□□□ -0.29
SYNGAP1-207ENST00000628646 FBXL5Q9UKA1 691 aa13.21□□□□□ -0.29
SYNGAP1-207ENST00000628646 BTNL10A8MVZ5 291 aa13.21□□□□□ -0.29
SYNGAP1-207ENST00000628646 M0QYV0 167 aa13.21□□□□□ -0.29
SYNGAP1-207ENST00000628646 NBNO60934 754 aa13.21□□□□□ -0.29
SYNGAP1-207ENST00000628646 ACAT1P24752 427 aaKnown RBP13.21□□□□□ -0.29
SYNGAP1-207ENST00000628646 CXCR5P32302 372 aa13.21□□□□□ -0.29
SYNGAP1-207ENST00000628646 BRCC3P46736 316 aa13.21□□□□□ -0.29
SYNGAP1-207ENST00000628646 CDH8P55286 799 aa13.21□□□□□ -0.29
SYNGAP1-207ENST00000628646 MGAT5BQ3V5L5 792 aa13.21□□□□□ -0.29
SYNGAP1-207ENST00000628646 SGO2Q562F6 1265 aa13.21□□□□□ -0.29
SYNGAP1-207ENST00000628646 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.21□□□□□ -0.29
SYNGAP1-207ENST00000628646 RBBP8NLQ8NC74 664 aaPredicted RBP13.21□□□□□ -0.29
SYNGAP1-207ENST00000628646 SYNJ2BP-COX16A0A087WUM0 186 aa13.21□□□□□ -0.3
SYNGAP1-207ENST00000628646 PPP1R37O75864 691 aa13.21□□□□□ -0.3
SYNGAP1-207ENST00000628646 CUL2Q13617 745 aa13.21□□□□□ -0.3
SYNGAP1-207ENST00000628646 ZBTB9Q96C00 473 aa13.21□□□□□ -0.3
SYNGAP1-207ENST00000628646 GPR88Q9GZN0 384 aa13.21□□□□□ -0.3
SYNGAP1-207ENST00000628646 COX16Q9P0S2 106 aa13.21□□□□□ -0.3
SYNGAP1-207ENST00000628646 RLFQ13129 1914 aa13.21□□□□□ -0.3
SYNGAP1-207ENST00000628646 ZNF280DQ6N043 979 aa13.2□□□□□ -0.3
SYNGAP1-207ENST00000628646 ACOT1Q86TX2 421 aa13.2□□□□□ -0.3
SYNGAP1-207ENST00000628646 EXOC4Q96A65 974 aa13.2□□□□□ -0.3
SYNGAP1-207ENST00000628646 SYT11Q9BT88 431 aa13.2□□□□□ -0.3
SYNGAP1-207ENST00000628646 GRIK1P39086 918 aa13.2□□□□□ -0.3
SYNGAP1-207ENST00000628646 PRKCIP41743 596 aa13.2□□□□□ -0.3
SYNGAP1-207ENST00000628646 PSMC1P62191 440 aaKnown RBP13.2□□□□□ -0.3
SYNGAP1-207ENST00000628646 PPP2R5EQ16537 467 aa13.2□□□□□ -0.3
SYNGAP1-207ENST00000628646 MEI1Q5TIA1 1274 aa13.2□□□□□ -0.3
SYNGAP1-207ENST00000628646 DCP1BQ8IZD4 617 aaKnown RBP13.2□□□□□ -0.3
SYNGAP1-207ENST00000628646 INSL6Q9Y581 213 aa13.2□□□□□ -0.3
SYNGAP1-207ENST00000628646 BHMG1C9JSJ3 638 aaPredicted RBP13.2□□□□□ -0.3
SYNGAP1-207ENST00000628646 BUB1O43683 1085 aa13.2□□□□□ -0.3
SYNGAP1-207ENST00000628646 PIGRP01833 764 aa13.2□□□□□ -0.3
SYNGAP1-207ENST00000628646 HOXA11P31270 313 aaPredicted RBP13.2□□□□□ -0.3
SYNGAP1-207ENST00000628646 TDRD10Q5VZ19 366 aaKnown RBP13.2□□□□□ -0.3
SYNGAP1-207ENST00000628646 OR6B2Q6IFH4 312 aa13.2□□□□□ -0.3
SYNGAP1-207ENST00000628646 C8orf74Q6P047 294 aa13.2□□□□□ -0.3
SYNGAP1-207ENST00000628646 PEX26Q7Z412 305 aa13.2□□□□□ -0.3
SYNGAP1-207ENST00000628646 ARNTL2Q8WYA1 636 aa13.2□□□□□ -0.3
SYNGAP1-207ENST00000628646 MS4A14Q96JA4 679 aa13.2□□□□□ -0.3
SYNGAP1-207ENST00000628646 SNX27Q96L92 541 aa13.2□□□□□ -0.3
SYNGAP1-207ENST00000628646 DMAC2Q9NW81 257 aa13.2□□□□□ -0.3
SYNGAP1-207ENST00000628646 ADAMTS1Q9UHI8 967 aa13.2□□□□□ -0.3
SYNGAP1-207ENST00000628646 GRID2IPA4D2P6 1211 aa13.19□□□□□ -0.3
SYNGAP1-207ENST00000628646 CDK7P50613 346 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms