RNA–Protein interactions for RNA: ENST00000625171.3

LINC00963-220, long intergenic non-protein coding RNA 963, humanhuman

TSL 5

Gene LINC00963, Length 830 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-220ENST00000625171 ZNF697Q5TEC3 545 aa12.51□□□□□ -0.41
LINC00963-220ENST00000625171 LCLAT1Q6UWP7 414 aa12.51□□□□□ -0.41
LINC00963-220ENST00000625171 CD300LGQ6UXG3 332 aa12.51□□□□□ -0.41
LINC00963-220ENST00000625171 SLFN11Q7Z7L1 901 aa12.51□□□□□ -0.41
LINC00963-220ENST00000625171 PALB2Q86YC2 1186 aa12.51□□□□□ -0.41
LINC00963-220ENST00000625171 COLGALT2Q8IYK4 626 aa12.51□□□□□ -0.41
LINC00963-220ENST00000625171 MCOLN2Q8IZK6 566 aa12.51□□□□□ -0.41
LINC00963-220ENST00000625171 TMEM35BQ8NCS4 154 aa12.51□□□□□ -0.41
LINC00963-220ENST00000625171 KBTBD7Q8WVZ9 684 aa12.51□□□□□ -0.41
LINC00963-220ENST00000625171 ATRIPQ8WXE1 791 aa12.51□□□□□ -0.41
LINC00963-220ENST00000625171 TFAP2BQ92481 460 aa12.51□□□□□ -0.41
LINC00963-220ENST00000625171 TNIP3Q96KP6 325 aa12.51□□□□□ -0.41
LINC00963-220ENST00000625171 MMS19Q96T76 1030 aa12.51□□□□□ -0.41
LINC00963-220ENST00000625171 ZSWIM1Q9BR11 485 aa12.51□□□□□ -0.41
LINC00963-220ENST00000625171 MRPL9Q9BYD2 267 aaKnown RBP12.51□□□□□ -0.41
LINC00963-220ENST00000625171 ELOVL4Q9GZR5 314 aa12.51□□□□□ -0.41
LINC00963-220ENST00000625171 ACP6Q9NPH0 428 aa12.51□□□□□ -0.41
LINC00963-220ENST00000625171 UVRAGQ9P2Y5 699 aa12.51□□□□□ -0.41
LINC00963-220ENST00000625171 LCMT1Q9UIC8 334 aa12.51□□□□□ -0.41
LINC00963-220ENST00000625171 ATP11BQ9Y2G3 1177 aa12.51□□□□□ -0.41
LINC00963-220ENST00000625171 JRKLQ9Y4A0 524 aa12.51□□□□□ -0.41
LINC00963-220ENST00000625171 DUSP10Q9Y6W6 482 aa12.51□□□□□ -0.41
LINC00963-220ENST00000625171 DNAH12Q6ZR08 3092 aa12.51□□□□□ -0.41
LINC00963-220ENST00000625171 LAMA2P24043 3122 aaKnown RBP12.51□□□□□ -0.41
LINC00963-220ENST00000625171 TANC1Q9C0D5 1861 aa12.51□□□□□ -0.41
LINC00963-220ENST00000625171 SCN1AP35498 2009 aa12.5□□□□□ -0.41
LINC00963-220ENST00000625171 O00370 1275 aa12.5□□□□□ -0.41
LINC00963-220ENST00000625171 CYB561D2O14569 222 aa12.5□□□□□ -0.41
LINC00963-220ENST00000625171 THAP12O43422 761 aa12.5□□□□□ -0.41
LINC00963-220ENST00000625171 SETSIPP0DME0 302 aa12.5□□□□□ -0.41
LINC00963-220ENST00000625171 CD58P19256 250 aa12.5□□□□□ -0.41
LINC00963-220ENST00000625171 MMP8P22894 467 aa12.5□□□□□ -0.41
LINC00963-220ENST00000625171 CLCNKBP51801 687 aa12.5□□□□□ -0.41
LINC00963-220ENST00000625171 PTP4A2Q12974 167 aa12.5□□□□□ -0.41
LINC00963-220ENST00000625171 PKDCCQ504Y2 493 aa12.5□□□□□ -0.41
LINC00963-220ENST00000625171 SGO2Q562F6 1265 aa12.5□□□□□ -0.41
LINC00963-220ENST00000625171 PAPD7Q5XG87 772 aaKnown RBP12.5□□□□□ -0.41
LINC00963-220ENST00000625171 SYT10Q6XYQ8 523 aa12.5□□□□□ -0.41
LINC00963-220ENST00000625171 MON1BQ7L1V2 547 aa12.5□□□□□ -0.41
LINC00963-220ENST00000625171 TMEM199Q8N511 208 aa12.5□□□□□ -0.41
LINC00963-220ENST00000625171 CYFIP2Q96F07 1278 aa12.5□□□□□ -0.41
LINC00963-220ENST00000625171 SCLYQ96I15 445 aa12.5□□□□□ -0.41
LINC00963-220ENST00000625171 SUSD3Q96L08 255 aa12.5□□□□□ -0.41
LINC00963-220ENST00000625171 SENP8Q96LD8 212 aa12.5□□□□□ -0.41
LINC00963-220ENST00000625171 CASD1Q96PB1 797 aa12.5□□□□□ -0.41
LINC00963-220ENST00000625171 TWNKQ96RR1 684 aa12.5□□□□□ -0.41
LINC00963-220ENST00000625171 WDR24Q96S15 920 aa12.5□□□□□ -0.41
LINC00963-220ENST00000625171 TMEM175Q9BSA9 504 aa12.5□□□□□ -0.41
LINC00963-220ENST00000625171 PACSIN1Q9BY11 444 aa12.5□□□□□ -0.41
LINC00963-220ENST00000625171 IRX2Q9BZI1 471 aaPredicted RBP12.5□□□□□ -0.41
LINC00963-220ENST00000625171 L2HGDHQ9H9P8 463 aa12.5□□□□□ -0.41
LINC00963-220ENST00000625171 GOLGA2P5Q9HBQ8 144 aa12.5□□□□□ -0.41
LINC00963-220ENST00000625171 CYLDQ9NQC7 956 aa12.5□□□□□ -0.41
LINC00963-220ENST00000625171 TBC1D13Q9NVG8 400 aa12.5□□□□□ -0.41
LINC00963-220ENST00000625171 TAS2R14Q9NYV8 317 aa12.5□□□□□ -0.41
LINC00963-220ENST00000625171 PRKAG2Q9UGJ0 569 aa12.5□□□□□ -0.41
LINC00963-220ENST00000625171 SALL4Q9UJQ4 1053 aa12.5□□□□□ -0.41
LINC00963-220ENST00000625171 L1RE1Q9UN81 338 aa12.5□□□□□ -0.41
LINC00963-220ENST00000625171 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.5□□□□□ -0.41
LINC00963-220ENST00000625171 CEP83Q9Y592 693 aa12.5□□□□□ -0.41
LINC00963-220ENST00000625171 TRIM43BA6NCK2 446 aa12.49□□□□□ -0.41
LINC00963-220ENST00000625171 BAIAP3O94812 1187 aa12.49□□□□□ -0.41
LINC00963-220ENST00000625171 POMCP01189 267 aa12.49□□□□□ -0.41
LINC00963-220ENST00000625171 CALB1P05937 261 aa12.49□□□□□ -0.41
LINC00963-220ENST00000625171 CASQ1P31415 396 aa12.49□□□□□ -0.41
LINC00963-220ENST00000625171 GPD2P43304 727 aa12.49□□□□□ -0.41
LINC00963-220ENST00000625171 NSFP46459 744 aaKnown RBP12.49□□□□□ -0.41
LINC00963-220ENST00000625171 GABRB2P47870 512 aa12.49□□□□□ -0.41
LINC00963-220ENST00000625171 RPL34P49207 117 aaKnown RBP12.49□□□□□ -0.41
LINC00963-220ENST00000625171 TERF1P54274 439 aa12.49□□□□□ -0.41
LINC00963-220ENST00000625171 CCL23P55773 120 aa12.49□□□□□ -0.41
LINC00963-220ENST00000625171 TCTN1Q2MV58 587 aa12.49□□□□□ -0.41
LINC00963-220ENST00000625171 ZNF569Q5MCW4 686 aa12.49□□□□□ -0.41
LINC00963-220ENST00000625171 DNTTIP2Q5QJE6 756 aaKnown RBP12.49□□□□□ -0.41
LINC00963-220ENST00000625171 TAF3Q5VWG9 929 aa12.49□□□□□ -0.41
LINC00963-220ENST00000625171 PLEKHA7Q6IQ23 1121 aa12.49□□□□□ -0.41
LINC00963-220ENST00000625171 SYCE1Q8N0S2 351 aa12.49□□□□□ -0.41
LINC00963-220ENST00000625171 PDCL2Q8N4E4 241 aa12.49□□□□□ -0.41
LINC00963-220ENST00000625171 WDTC1Q8N5D0 677 aa12.49□□□□□ -0.41
LINC00963-220ENST00000625171 LRRC57Q8N9N7 239 aa12.49□□□□□ -0.41
LINC00963-220ENST00000625171 SLC35G2Q8TBE7 412 aa12.49□□□□□ -0.41
LINC00963-220ENST00000625171 TOP1MTQ969P6 601 aa12.49□□□□□ -0.41
LINC00963-220ENST00000625171 TRIM43Q96BQ3 446 aaPredicted RBP12.49□□□□□ -0.41
LINC00963-220ENST00000625171 HEXIM2Q96MH2 286 aaKnown RBP12.49□□□□□ -0.41
LINC00963-220ENST00000625171 ALS2CR12Q96Q35 445 aa12.49□□□□□ -0.41
LINC00963-220ENST00000625171 MRPL45Q9BRJ2 306 aaKnown RBP12.49□□□□□ -0.41
LINC00963-220ENST00000625171 MIS12Q9H081 205 aa12.49□□□□□ -0.41
LINC00963-220ENST00000625171 THAP2Q9H0W7 228 aa12.49□□□□□ -0.41
LINC00963-220ENST00000625171 SNX25Q9H3E2 840 aa12.49□□□□□ -0.41
LINC00963-220ENST00000625171 ABCB6Q9NP58 842 aa12.49□□□□□ -0.41
LINC00963-220ENST00000625171 PRDM6Q9NQX0 595 aa12.49□□□□□ -0.41
LINC00963-220ENST00000625171 WDR35Q9P2L0 1181 aa12.49□□□□□ -0.41
LINC00963-220ENST00000625171 DNAI1Q9UI46 699 aa12.49□□□□□ -0.41
LINC00963-220ENST00000625171 MUC3AQ02505 3323 aa12.49□□□□□ -0.41
LINC00963-220ENST00000625171 CTAGE9A4FU28 777 aa12.48□□□□□ -0.41
LINC00963-220ENST00000625171 A8MXQ7 604 aa12.48□□□□□ -0.41
LINC00963-220ENST00000625171 FANCGO15287 622 aa12.48□□□□□ -0.41
LINC00963-220ENST00000625171 TRAPPC3O43617 180 aa12.48□□□□□ -0.41
LINC00963-220ENST00000625171 B3GAT3O94766 335 aa12.48□□□□□ -0.41
LINC00963-220ENST00000625171 DDHD2O94830 711 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms