RNA–Protein interactions for RNA: ENST00000623242.3

ATRX-209, Transcript of ATRX, chromatin remodeler, humanhuman

TSL 3

Gene ATRX, Length 725 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATRX-209ENST00000623242 RUVBL1Q9Y265 456 aaKnown RBP4.84□□□□□ -1.63
ATRX-209ENST00000623242 STXBP5LQ9Y2K9 1186 aa4.84□□□□□ -1.63
ATRX-209ENST00000623242 TNKS1BP1Q9C0C2 1729 aaKnown RBP4.83□□□□□ -1.64
ATRX-209ENST00000623242 KDM6AO15550 1401 aaPredicted RBP4.83□□□□□ -1.64
ATRX-209ENST00000623242 PNPLA7Q6ZV29 1317 aa4.83□□□□□ -1.64
ATRX-209ENST00000623242 SLC16A6O15403 523 aa4.83□□□□□ -1.64
ATRX-209ENST00000623242 KCNQ3O43525 872 aa4.83□□□□□ -1.64
ATRX-209ENST00000623242 FOXS1O43638 330 aa4.83□□□□□ -1.64
ATRX-209ENST00000623242 CAND2O75155 1236 aa4.83□□□□□ -1.64
ATRX-209ENST00000623242 PLATP00750 562 aa4.83□□□□□ -1.64
ATRX-209ENST00000623242 SNRPA1P09661 255 aaKnown RBP4.83□□□□□ -1.64
ATRX-209ENST00000623242 SBK3P0C264 359 aa4.83□□□□□ -1.64
ATRX-209ENST00000623242 TRIM27P14373 513 aa4.83□□□□□ -1.64
ATRX-209ENST00000623242 RHCEP18577 417 aa4.83□□□□□ -1.64
ATRX-209ENST00000623242 PTMSP20962 102 aa4.83□□□□□ -1.64
ATRX-209ENST00000623242 RHDQ02161 417 aa4.83□□□□□ -1.64
ATRX-209ENST00000623242 FOXL1Q12952 345 aa4.83□□□□□ -1.64
ATRX-209ENST00000623242 CCSAPQ6IQ19 270 aaPredicted RBP4.83□□□□□ -1.64
ATRX-209ENST00000623242 ZNF790Q6PG37 636 aa4.83□□□□□ -1.64
ATRX-209ENST00000623242 PDZD4Q76G19 769 aaPredicted RBP4.83□□□□□ -1.64
ATRX-209ENST00000623242 LIMS2Q7Z4I7 341 aa4.83□□□□□ -1.64
ATRX-209ENST00000623242 HEATR3Q7Z4Q2 680 aa4.83□□□□□ -1.64
ATRX-209ENST00000623242 XYLT1Q86Y38 959 aa4.83□□□□□ -1.64
ATRX-209ENST00000623242 FUKQ8N0W3 1084 aa4.83□□□□□ -1.64
ATRX-209ENST00000623242 PIGBQ92521 554 aa4.83□□□□□ -1.64
ATRX-209ENST00000623242 ZNF512Q96ME7 567 aaPredicted RBP4.83□□□□□ -1.64
ATRX-209ENST00000623242 OR14A2Q96R54 314 aa4.83□□□□□ -1.64
ATRX-209ENST00000623242 SARGQ9BW04 601 aa4.83□□□□□ -1.64
ATRX-209ENST00000623242 NELFAQ9H3P2 528 aa4.83□□□□□ -1.64
ATRX-209ENST00000623242 MSL2Q9HCI7 577 aa4.83□□□□□ -1.64
ATRX-209ENST00000623242 KMT5AQ9NQR1 393 aa4.83□□□□□ -1.64
ATRX-209ENST00000623242 CHST12Q9NRB3 414 aa4.83□□□□□ -1.64
ATRX-209ENST00000623242 TMEM140Q9NV12 185 aa4.83□□□□□ -1.64
ATRX-209ENST00000623242 ASAP1Q9ULH1 1129 aa4.83□□□□□ -1.64
ATRX-209ENST00000623242 LRRC37A3O60309 1634 aa4.83□□□□□ -1.64
ATRX-209ENST00000623242 PALLDQ8WX93 1383 aa4.82□□□□□ -1.64
ATRX-209ENST00000623242 A0A088AWK7 358 aa4.82□□□□□ -1.64
ATRX-209ENST00000623242 B8ZZF3 427 aa4.82□□□□□ -1.64
ATRX-209ENST00000623242 F2RL2O00254 374 aa4.82□□□□□ -1.64
ATRX-209ENST00000623242 CHL1O00533 1208 aa4.82□□□□□ -1.64
ATRX-209ENST00000623242 RAD17O75943 681 aa4.82□□□□□ -1.64
ATRX-209ENST00000623242 STARD3NLO95772 234 aa4.82□□□□□ -1.64
ATRX-209ENST00000623242 ZBED1O96006 694 aa4.82□□□□□ -1.64
ATRX-209ENST00000623242 HRGP04196 525 aa4.82□□□□□ -1.64
ATRX-209ENST00000623242 TYRP14679 529 aa4.82□□□□□ -1.64
ATRX-209ENST00000623242 MCCP23508 829 aa4.82□□□□□ -1.64
ATRX-209ENST00000623242 EIF4A1P60842 406 aaKnown RBP4.82□□□□□ -1.64
ATRX-209ENST00000623242 RAB1AP62820 205 aa4.82□□□□□ -1.64
ATRX-209ENST00000623242 HLTFQ14527 1009 aaKnown RBP eCLIP4.82□□□□□ -1.64
ATRX-209ENST00000623242 PLS1Q14651 629 aa4.82□□□□□ -1.64
ATRX-209ENST00000623242 GRM7Q14831 915 aa4.82□□□□□ -1.64
ATRX-209ENST00000623242 ANO6Q4KMQ2 910 aa4.82□□□□□ -1.64
ATRX-209ENST00000623242 FKBP15Q5T1M5 1219 aa4.82□□□□□ -1.64
ATRX-209ENST00000623242 THEMIS2Q5TEJ8 643 aa4.82□□□□□ -1.64
ATRX-209ENST00000623242 OTUD7BQ6GQQ9 843 aa4.82□□□□□ -1.64
ATRX-209ENST00000623242 KSR2Q6VAB6 950 aa4.82□□□□□ -1.64
ATRX-209ENST00000623242 GADL1Q6ZQY3 521 aa4.82□□□□□ -1.64
ATRX-209ENST00000623242 SEM1Q6ZVN7 128 aa4.82□□□□□ -1.64
ATRX-209ENST00000623242 GPRIN1Q7Z2K8 1008 aa4.82□□□□□ -1.64
ATRX-209ENST00000623242 PLXDC1Q8IUK5 500 aa4.82□□□□□ -1.64
ATRX-209ENST00000623242 RPAP2Q8IXW5 612 aaPredicted RBP4.82□□□□□ -1.64
ATRX-209ENST00000623242 FAM43AQ8N2R8 423 aa4.82□□□□□ -1.64
ATRX-209ENST00000623242 CELF5Q8N6W0 485 aaKnown RBP4.82□□□□□ -1.64
ATRX-209ENST00000623242 C8orf58Q8NAV2 365 aa4.82□□□□□ -1.64
ATRX-209ENST00000623242 CDK5RAP3Q96JB5 506 aa4.82□□□□□ -1.64
ATRX-209ENST00000623242 RBM15Q96T37 977 aaKnown RBP eCLIP4.82□□□□□ -1.64
ATRX-209ENST00000623242 MRI1Q9BV20 369 aa4.82□□□□□ -1.64
ATRX-209ENST00000623242 CPEB1Q9BZB8 566 aaKnown RBP4.82□□□□□ -1.64
ATRX-209ENST00000623242 BHMT2Q9H2M3 363 aa4.82□□□□□ -1.64
ATRX-209ENST00000623242 ARMT1Q9H993 441 aa4.82□□□□□ -1.64
ATRX-209ENST00000623242 ATP6V0A4Q9HBG4 840 aa4.82□□□□□ -1.64
ATRX-209ENST00000623242 LMBRD1Q9NUN5 540 aa4.82□□□□□ -1.64
ATRX-209ENST00000623242 PLA2G3Q9NZ20 509 aa4.82□□□□□ -1.64
ATRX-209ENST00000623242 ABCF2Q9UG63 623 aa4.82□□□□□ -1.64
ATRX-209ENST00000623242 STAP2Q9UGK3 403 aa4.82□□□□□ -1.64
ATRX-209ENST00000623242 CCNL1Q9UK58 526 aaPredicted RBP4.82□□□□□ -1.64
ATRX-209ENST00000623242 L1RE1Q9UN81 338 aa4.82□□□□□ -1.64
ATRX-209ENST00000623242 ZFR2Q9UPR6 939 aaKnown RBP4.82□□□□□ -1.64
ATRX-209ENST00000623242 POLHQ9Y253 713 aa4.82□□□□□ -1.64
ATRX-209ENST00000623242 SH3BP1Q9Y3L3 701 aa4.82□□□□□ -1.64
ATRX-209ENST00000623242 SLC30A1Q9Y6M5 507 aa4.82□□□□□ -1.64
ATRX-209ENST00000623242 CEMIPQ8WUJ3 1361 aa4.81□□□□□ -1.64
ATRX-209ENST00000623242 ZNF536O15090 1300 aa4.81□□□□□ -1.64
ATRX-209ENST00000623242 A0A0G2JLL6 359 aaPredicted RBP4.81□□□□□ -1.64
ATRX-209ENST00000623242 NPEPPSL1A6NEC2 478 aa4.81□□□□□ -1.64
ATRX-209ENST00000623242 KRTAP9-7A8MTY7 169 aa4.81□□□□□ -1.64
ATRX-209ENST00000623242 FAM227AF5H4B4 570 aa4.81□□□□□ -1.64
ATRX-209ENST00000623242 RPLP2P05387 115 aaKnown RBP4.81□□□□□ -1.64
ATRX-209ENST00000623242 KRT18P05783 430 aaKnown RBP4.81□□□□□ -1.64
ATRX-209ENST00000623242 CD1AP06126 327 aa4.81□□□□□ -1.64
ATRX-209ENST00000623242 RAP2AP10114 183 aa4.81□□□□□ -1.64
ATRX-209ENST00000623242 MYL6BP14649 208 aa4.81□□□□□ -1.64
ATRX-209ENST00000623242 HOXA5P20719 270 aa4.81□□□□□ -1.64
ATRX-209ENST00000623242 HMGB2P26583 209 aaKnown RBP4.81□□□□□ -1.64
ATRX-209ENST00000623242 SLC6A4P31645 630 aa4.81□□□□□ -1.64
ATRX-209ENST00000623242 MSX2P35548 267 aaPredicted RBP4.81□□□□□ -1.64
ATRX-209ENST00000623242 RPS19P39019 145 aaKnown RBP4.81□□□□□ -1.64
ATRX-209ENST00000623242 IL12RB1P42701 662 aa4.81□□□□□ -1.64
ATRX-209ENST00000623242 PURAQ00577 322 aaKnown RBP4.81□□□□□ -1.64
ATRX-209ENST00000623242 NEXNQ0ZGT2 675 aa4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms