RNA–Protein interactions for RNA: ENST00000623056.3

LDB3-209, Transcript of LIM domain binding 3, humanhuman

TSL 5 BASIC

Gene LDB3, Length 2,314 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-209ENST00000623056 CERS5Q8N5B7 392 aa14.85□□□□□ -0.03
LDB3-209ENST00000623056 BANPQ8N9N5 519 aa14.85□□□□□ -0.03
LDB3-209ENST00000623056 GADD45GIP1Q8TAE8 222 aaPredicted RBP14.85□□□□□ -0.03
LDB3-209ENST00000623056 ITFG2Q969R8 447 aa14.85□□□□□ -0.03
LDB3-209ENST00000623056 TUBGCP5Q96RT8 1024 aa14.85□□□□□ -0.03
LDB3-209ENST00000623056 WDR11Q9BZH6 1224 aa14.85□□□□□ -0.03
LDB3-209ENST00000623056 UBE2OQ9C0C9 1292 aaKnown RBP14.85□□□□□ -0.03
LDB3-209ENST00000623056 SUGT1Q9Y2Z0 365 aa14.85□□□□□ -0.03
LDB3-209ENST00000623056 CLUHO75153 1309 aa14.85□□□□□ -0.03
LDB3-209ENST00000623056 PI4K2BG5E9Z4 385 aa14.84□□□□□ -0.03
LDB3-209ENST00000623056 GOLGA8SH3BPF8 625 aa14.84□□□□□ -0.03
LDB3-209ENST00000623056 GOLGA8MH3BSY2 632 aa14.84□□□□□ -0.03
LDB3-209ENST00000623056 FCHO1O14526 889 aa14.84□□□□□ -0.03
LDB3-209ENST00000623056 ATP2A1O14983 1001 aa14.84□□□□□ -0.03
LDB3-209ENST00000623056 NSFP46459 744 aaKnown RBP14.84□□□□□ -0.03
LDB3-209ENST00000623056 MCL1Q07820 350 aa14.84□□□□□ -0.03
LDB3-209ENST00000623056 NFX1Q12986 1120 aaKnown RBP14.84□□□□□ -0.03
LDB3-209ENST00000623056 ADGRD1Q6QNK2 874 aa14.84□□□□□ -0.03
LDB3-209ENST00000623056 MON1BQ7L1V2 547 aa14.84□□□□□ -0.03
LDB3-209ENST00000623056 ARHGAP24Q8N264 748 aa14.84□□□□□ -0.03
LDB3-209ENST00000623056 FAM81AQ8TBF8 368 aa14.84□□□□□ -0.03
LDB3-209ENST00000623056 NCSTNQ92542 709 aa14.84□□□□□ -0.03
LDB3-209ENST00000623056 DTNBP1Q96EV8 351 aa14.84□□□□□ -0.03
LDB3-209ENST00000623056 FAM161BQ96MY7 647 aa14.84□□□□□ -0.03
LDB3-209ENST00000623056 SPATA16Q9BXB7 569 aa14.84□□□□□ -0.03
LDB3-209ENST00000623056 ARMCX1Q9P291 453 aa14.84□□□□□ -0.03
LDB3-209ENST00000623056 SHOC2Q9UQ13 582 aa14.84□□□□□ -0.03
LDB3-209ENST00000623056 SEC23IPQ9Y6Y8 1000 aaKnown RBP14.84□□□□□ -0.03
LDB3-209ENST00000623056 ZNF536O15090 1300 aa14.84□□□□□ -0.03
LDB3-209ENST00000623056 TGDSO95455 350 aa14.84□□□□□ -0.03
LDB3-209ENST00000623056 APBA3O96018 575 aa14.84□□□□□ -0.03
LDB3-209ENST00000623056 ANPEPP15144 967 aa14.84□□□□□ -0.03
LDB3-209ENST00000623056 GLRA2P23416 452 aa14.84□□□□□ -0.03
LDB3-209ENST00000623056 SSTR1P30872 391 aa14.84□□□□□ -0.03
LDB3-209ENST00000623056 CPA2P48052 419 aa14.84□□□□□ -0.03
LDB3-209ENST00000623056 ARL4CP56559 192 aa14.84□□□□□ -0.03
LDB3-209ENST00000623056 GTF2BQ00403 316 aa14.84□□□□□ -0.03
LDB3-209ENST00000623056 LRRC23Q53EV4 343 aaPredicted RBP14.84□□□□□ -0.03
LDB3-209ENST00000623056 CEP55Q53EZ4 464 aa14.84□□□□□ -0.03
LDB3-209ENST00000623056 DRICH1Q6PGQ1 229 aaPredicted RBP14.84□□□□□ -0.03
LDB3-209ENST00000623056 B3GNT9Q6UX72 402 aa14.84□□□□□ -0.03
LDB3-209ENST00000623056 NLRX1Q86UT6 975 aa14.84□□□□□ -0.03
LDB3-209ENST00000623056 OXNAD1Q96HP4 312 aaPredicted RBP14.84□□□□□ -0.03
LDB3-209ENST00000623056 GMCL1Q96IK5 515 aa14.84□□□□□ -0.03
LDB3-209ENST00000623056 PAFAH2Q99487 392 aa14.84□□□□□ -0.03
LDB3-209ENST00000623056 PI4K2AQ9BTU6 479 aa14.84□□□□□ -0.03
LDB3-209ENST00000623056 TEKT3Q9BXF9 490 aa14.84□□□□□ -0.03
LDB3-209ENST00000623056 RANBP17Q9H2T7 1088 aaKnown RBP14.84□□□□□ -0.03
LDB3-209ENST00000623056 NFASCO94856 1347 aa14.84□□□□□ -0.03
LDB3-209ENST00000623056 DDX39AO00148 427 aaKnown RBP14.83□□□□□ -0.03
LDB3-209ENST00000623056 SLC16A4O15374 487 aa14.83□□□□□ -0.03
LDB3-209ENST00000623056 MAGEC1O60732 1142 aa14.83□□□□□ -0.03
LDB3-209ENST00000623056 ATF7P17544 494 aaPredicted RBP14.83□□□□□ -0.03
LDB3-209ENST00000623056 RANBP1P43487 201 aa14.83□□□□□ -0.03
LDB3-209ENST00000623056 RTP1P59025 263 aa14.83□□□□□ -0.03
LDB3-209ENST00000623056 MCCD1P59942 119 aaPredicted RBP14.83□□□□□ -0.03
LDB3-209ENST00000623056 DSG1Q02413 1049 aa14.83□□□□□ -0.03
LDB3-209ENST00000623056 PRKD1Q15139 912 aaPredicted RBP14.83□□□□□ -0.03
LDB3-209ENST00000623056 DLGAP5Q15398 846 aa14.83□□□□□ -0.03
LDB3-209ENST00000623056 ATP13A4Q4VNC1 1196 aa14.83□□□□□ -0.03
LDB3-209ENST00000623056 ARMC3Q5W041 872 aa14.83□□□□□ -0.03
LDB3-209ENST00000623056 SPIRE2Q8WWL2 714 aa14.83□□□□□ -0.03
LDB3-209ENST00000623056 NDNQ99608 321 aa14.83□□□□□ -0.03
LDB3-209ENST00000623056 ECSITQ9BQ95 431 aa14.83□□□□□ -0.03
LDB3-209ENST00000623056 C11orf70Q9BRQ4 267 aa14.83□□□□□ -0.03
LDB3-209ENST00000623056 DHRS4Q9BTZ2 278 aa14.83□□□□□ -0.03
LDB3-209ENST00000623056 FETUBQ9UGM5 382 aa14.83□□□□□ -0.03
LDB3-209ENST00000623056 DENND3A2RUS2 1198 aa14.83□□□□□ -0.04
LDB3-209ENST00000623056 B2RBV5 119 aa14.83□□□□□ -0.04
LDB3-209ENST00000623056 F8W8V4 182 aa14.83□□□□□ -0.04
LDB3-209ENST00000623056 POLRMTO00411 1230 aaKnown RBP14.83□□□□□ -0.04
LDB3-209ENST00000623056 LGR5O75473 907 aa14.83□□□□□ -0.04
LDB3-209ENST00000623056 MYL2P10916 166 aa14.83□□□□□ -0.04
LDB3-209ENST00000623056 GAD2Q05329 585 aa14.83□□□□□ -0.04
LDB3-209ENST00000623056 HIF1AQ16665 826 aa14.83□□□□□ -0.04
LDB3-209ENST00000623056 GMCL1P1Q8NEA9 526 aa14.83□□□□□ -0.04
LDB3-209ENST00000623056 CCDC110Q8TBZ0 833 aa14.83□□□□□ -0.04
LDB3-209ENST00000623056 ALKBH8Q96BT7 664 aaKnown RBP14.83□□□□□ -0.04
LDB3-209ENST00000623056 CCDC28BQ9BUN5 200 aa14.83□□□□□ -0.04
LDB3-209ENST00000623056 PHACTR1Q9C0D0 580 aa14.83□□□□□ -0.04
LDB3-209ENST00000623056 NMUR2Q9GZQ4 415 aa14.83□□□□□ -0.04
LDB3-209ENST00000623056 ADAMTSL1Q8N6G6 1762 aa14.83□□□□□ -0.04
LDB3-209ENST00000623056 LOXHD1Q8IVV2 1947 aa14.83□□□□□ -0.04
LDB3-209ENST00000623056 PHBP35232 272 aa14.82□□□□□ -0.04
LDB3-209ENST00000623056 CDK7P50613 346 aa14.82□□□□□ -0.04
LDB3-209ENST00000623056 SNRPFP62306 86 aaKnown RBP14.82□□□□□ -0.04
LDB3-209ENST00000623056 MAMLD1Q13495 774 aa14.82□□□□□ -0.04
LDB3-209ENST00000623056 LIN52Q52LA3 116 aa14.82□□□□□ -0.04
LDB3-209ENST00000623056 FAM91A1Q658Y4 838 aa14.82□□□□□ -0.04
LDB3-209ENST00000623056 SV2AQ7L0J3 742 aa14.82□□□□□ -0.04
LDB3-209ENST00000623056 ALYREFQ86V81 257 aaKnown RBP14.82□□□□□ -0.04
LDB3-209ENST00000623056 FBXO27Q8NI29 283 aa14.82□□□□□ -0.04
LDB3-209ENST00000623056 PYROXD1Q8WU10 500 aa14.82□□□□□ -0.04
LDB3-209ENST00000623056 DCAKDQ8WVC6 231 aa14.82□□□□□ -0.04
LDB3-209ENST00000623056 FAM210AQ96ND0 272 aa14.82□□□□□ -0.04
LDB3-209ENST00000623056 SLITRK1Q96PX8 696 aa14.82□□□□□ -0.04
LDB3-209ENST00000623056 FNBP1Q96RU3 617 aa14.82□□□□□ -0.04
LDB3-209ENST00000623056 VCX3BQ9H321 246 aa14.82□□□□□ -0.04
LDB3-209ENST00000623056 OCEL1Q9H607 264 aa14.82□□□□□ -0.04
LDB3-209ENST00000623056 ACSS3Q9H6R3 686 aa14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 153.9 ms