RNA–Protein interactions for RNA: ENST00000622555.1

PTCHD3-202, Transcript of patched domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene PTCHD3, Length 1,720 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3-202ENST00000622555 BMS1Q14692 1282 aaKnown RBP18.97■□□□□ 0.63
PTCHD3-202ENST00000622555 RASIP1Q5U651 963 aa18.97■□□□□ 0.63
PTCHD3-202ENST00000622555 KCNT2Q6UVM3 1135 aa18.97■□□□□ 0.63
PTCHD3-202ENST00000622555 ACOT1Q86TX2 421 aa18.97■□□□□ 0.63
PTCHD3-202ENST00000622555 TMEM173Q86WV6 379 aaPredicted RBP18.97■□□□□ 0.63
PTCHD3-202ENST00000622555 ZNF677Q86XU0 584 aa18.97■□□□□ 0.63
PTCHD3-202ENST00000622555 FIBCD1Q8N539 461 aa18.97■□□□□ 0.63
PTCHD3-202ENST00000622555 RNPC3Q96LT9 517 aaKnown RBP18.97■□□□□ 0.63
PTCHD3-202ENST00000622555 DDX43Q9NXZ2 648 aaKnown RBP18.97■□□□□ 0.63
PTCHD3-202ENST00000622555 A0A087X0T9 212 aa18.96■□□□□ 0.63
PTCHD3-202ENST00000622555 EIF3CLB5ME19 914 aaKnown RBP18.96■□□□□ 0.63
PTCHD3-202ENST00000622555 DDX3XO00571 662 aaKnown RBP eCLIP18.96■□□□□ 0.63
PTCHD3-202ENST00000622555 TLL1O43897 1013 aa18.96■□□□□ 0.63
PTCHD3-202ENST00000622555 IPO7O95373 1038 aaKnown RBP18.96■□□□□ 0.63
PTCHD3-202ENST00000622555 FAM228BP0C875 321 aa18.96■□□□□ 0.63
PTCHD3-202ENST00000622555 FMO1Q01740 532 aa18.96■□□□□ 0.63
PTCHD3-202ENST00000622555 SLC18A3Q16572 532 aa18.96■□□□□ 0.63
PTCHD3-202ENST00000622555 FUT10Q6P4F1 479 aa18.96■□□□□ 0.63
PTCHD3-202ENST00000622555 COLGALT1Q8NBJ5 622 aa18.96■□□□□ 0.63
PTCHD3-202ENST00000622555 OLIG1Q8TAK6 271 aa18.96■□□□□ 0.63
PTCHD3-202ENST00000622555 LNX1Q8TBB1 728 aaPredicted RBP18.96■□□□□ 0.63
PTCHD3-202ENST00000622555 SPATA18Q8TC71 538 aa18.96■□□□□ 0.63
PTCHD3-202ENST00000622555 BCL7CQ8WUZ0 217 aaPredicted RBP18.96■□□□□ 0.63
PTCHD3-202ENST00000622555 ZNF606Q8WXB4 792 aa18.96■□□□□ 0.63
PTCHD3-202ENST00000622555 TFAP2BQ92481 460 aa18.96■□□□□ 0.63
PTCHD3-202ENST00000622555 EIF3CQ99613 913 aaKnown RBP18.96■□□□□ 0.63
PTCHD3-202ENST00000622555 RAD9AQ99638 391 aa18.96■□□□□ 0.63
PTCHD3-202ENST00000622555 GPR62Q9BZJ7 368 aa18.96■□□□□ 0.63
PTCHD3-202ENST00000622555 PDCL3Q9H2J4 239 aa18.96■□□□□ 0.63
PTCHD3-202ENST00000622555 DPEP3Q9H4B8 488 aa18.96■□□□□ 0.63
PTCHD3-202ENST00000622555 VDRP11473 427 aa18.95■□□□□ 0.62
PTCHD3-202ENST00000622555 ACAT1P24752 427 aaKnown RBP18.95■□□□□ 0.62
PTCHD3-202ENST00000622555 TKTP29401 623 aaKnown RBP18.95■□□□□ 0.62
PTCHD3-202ENST00000622555 SSTR3P32745 418 aaPredicted RBP18.95■□□□□ 0.62
PTCHD3-202ENST00000622555 CYP27A1Q02318 531 aa18.95■□□□□ 0.62
PTCHD3-202ENST00000622555 ELAVL2Q12926 359 aaKnown RBP18.95■□□□□ 0.62
PTCHD3-202ENST00000622555 SPA17Q15506 151 aa18.95■□□□□ 0.62
PTCHD3-202ENST00000622555 SGO2Q562F6 1265 aa18.95■□□□□ 0.62
PTCHD3-202ENST00000622555 FAM171A1Q5VUB5 890 aa18.95■□□□□ 0.62
PTCHD3-202ENST00000622555 OVOS1Q6IE37 1185 aa18.95■□□□□ 0.62
PTCHD3-202ENST00000622555 ACRBPQ8NEB7 543 aa18.95■□□□□ 0.62
PTCHD3-202ENST00000622555 IGSF21Q96ID5 467 aa18.95■□□□□ 0.62
PTCHD3-202ENST00000622555 TNIP3Q96KP6 325 aa18.95■□□□□ 0.62
PTCHD3-202ENST00000622555 ZSWIM1Q9BR11 485 aa18.95■□□□□ 0.62
PTCHD3-202ENST00000622555 CARNS1A5YM72 827 aa18.94■□□□□ 0.62
PTCHD3-202ENST00000622555 SYN3O14994 580 aa18.94■□□□□ 0.62
PTCHD3-202ENST00000622555 MED7O43513 233 aa18.94■□□□□ 0.62
PTCHD3-202ENST00000622555 SHHQ15465 462 aa18.94■□□□□ 0.62
PTCHD3-202ENST00000622555 CEP57Q86XR8 500 aa18.94■□□□□ 0.62
PTCHD3-202ENST00000622555 CRYBG2Q8N1P7 616 aa18.94■□□□□ 0.62
PTCHD3-202ENST00000622555 C17orf53Q8N3J3 647 aaPredicted RBP18.94■□□□□ 0.62
PTCHD3-202ENST00000622555 SLC30A5Q8TAD4 765 aa18.94■□□□□ 0.62
PTCHD3-202ENST00000622555 AAASQ9NRG9 546 aa18.94■□□□□ 0.62
PTCHD3-202ENST00000622555 KIAA1257Q9ULG3 409 aa18.94■□□□□ 0.62
PTCHD3-202ENST00000622555 NLRC5Q86WI3 1866 aa18.94■□□□□ 0.62
PTCHD3-202ENST00000622555 GBF1Q92538 1859 aa18.94■□□□□ 0.62
PTCHD3-202ENST00000622555 PCSK1P29120 753 aa18.94■□□□□ 0.62
PTCHD3-202ENST00000622555 PSMC1P62191 440 aaKnown RBP18.94■□□□□ 0.62
PTCHD3-202ENST00000622555 YWHAHQ04917 246 aaPredicted RBP18.94■□□□□ 0.62
PTCHD3-202ENST00000622555 PALB2Q86YC2 1186 aa18.94■□□□□ 0.62
PTCHD3-202ENST00000622555 THEM5Q8N1Q8 247 aa18.94■□□□□ 0.62
PTCHD3-202ENST00000622555 SLC39A11Q8N1S5 342 aa18.94■□□□□ 0.62
PTCHD3-202ENST00000622555 C12orf29Q8N999 325 aa18.94■□□□□ 0.62
PTCHD3-202ENST00000622555 PCDHB18PQ96TA0 734 aa18.94■□□□□ 0.62
PTCHD3-202ENST00000622555 SYT15Q9BQS2 421 aa18.94■□□□□ 0.62
PTCHD3-202ENST00000622555 UBE2OQ9C0C9 1292 aaKnown RBP18.94■□□□□ 0.62
PTCHD3-202ENST00000622555 FAM49BQ9NUQ9 324 aa18.94■□□□□ 0.62
PTCHD3-202ENST00000622555 ADGRG1Q9Y653 693 aa18.94■□□□□ 0.62
PTCHD3-202ENST00000622555 MYH10P35580 1976 aa18.93■□□□□ 0.62
PTCHD3-202ENST00000622555 ZNF263O14978 683 aa18.93■□□□□ 0.62
PTCHD3-202ENST00000622555 LCA5LO95447 670 aa18.93■□□□□ 0.62
PTCHD3-202ENST00000622555 CFHP08603 1231 aa18.93■□□□□ 0.62
PTCHD3-202ENST00000622555 CCDC175P0C221 793 aa18.93■□□□□ 0.62
PTCHD3-202ENST00000622555 KRT83P78385 493 aa18.93■□□□□ 0.62
PTCHD3-202ENST00000622555 CCDC122Q5T0U0 273 aa18.93■□□□□ 0.62
PTCHD3-202ENST00000622555 ALKBH5Q6P6C2 394 aaKnown RBP18.93■□□□□ 0.62
PTCHD3-202ENST00000622555 PASD1Q8IV76 773 aa18.93■□□□□ 0.62
PTCHD3-202ENST00000622555 B3GALNT2Q8NCR0 500 aa18.93■□□□□ 0.62
PTCHD3-202ENST00000622555 SP7Q8TDD2 431 aaPredicted RBP18.93■□□□□ 0.62
PTCHD3-202ENST00000622555 TMEM169Q96HH4 297 aa18.93■□□□□ 0.62
PTCHD3-202ENST00000622555 B3GALT6Q96L58 329 aa18.93■□□□□ 0.62
PTCHD3-202ENST00000622555 LPIN3Q9BQK8 851 aa18.93■□□□□ 0.62
PTCHD3-202ENST00000622555 RTP3Q9BQQ7 232 aa18.93■□□□□ 0.62
PTCHD3-202ENST00000622555 SPG21Q9NZD8 308 aa18.93■□□□□ 0.62
PTCHD3-202ENST00000622555 NAGPAQ9UK23 515 aa18.93■□□□□ 0.62
PTCHD3-202ENST00000622555 CDH9Q9ULB4 789 aa18.93■□□□□ 0.62
PTCHD3-202ENST00000622555 PCDHB12Q9Y5F1 795 aa18.93■□□□□ 0.62
PTCHD3-202ENST00000622555 FAM170AA1A519 330 aa18.92■□□□□ 0.62
PTCHD3-202ENST00000622555 TMCO5BA8MYB1 307 aa18.92■□□□□ 0.62
PTCHD3-202ENST00000622555 H0YGN5 161 aa18.92■□□□□ 0.62
PTCHD3-202ENST00000622555 ATP2C2O75185 946 aa18.92■□□□□ 0.62
PTCHD3-202ENST00000622555 PTPN1P18031 435 aaKnown RBP18.92■□□□□ 0.62
PTCHD3-202ENST00000622555 FGFR3P22607 806 aa18.92■□□□□ 0.62
PTCHD3-202ENST00000622555 RABGGTBP53611 331 aa18.92■□□□□ 0.62
PTCHD3-202ENST00000622555 PPP2R2CQ9Y2T4 447 aa18.92■□□□□ 0.62
PTCHD3-202ENST00000622555 REXO2Q9Y3B8 237 aaKnown RBP18.92■□□□□ 0.62
PTCHD3-202ENST00000622555 LCHNA4D1U4 455 aa18.91■□□□□ 0.62
PTCHD3-202ENST00000622555 O00370 1275 aa18.91■□□□□ 0.62
PTCHD3-202ENST00000622555 PPM1AP35813 382 aa18.91■□□□□ 0.62
PTCHD3-202ENST00000622555 CNGA2Q16280 664 aa18.91■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms