RNA–Protein interactions for RNA: ENST00000622309.4

VPS11-209, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS11, Length 3,352 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-209ENST00000622309 DDX24Q9GZR7 859 aaKnown RBP eCLIP8.3□□□□□ -1.08
VPS11-209ENST00000622309 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP8.3□□□□□ -1.08
VPS11-209ENST00000622309 EVLQ9UI08 416 aaPredicted RBP8.3□□□□□ -1.08
VPS11-209ENST00000622309 NAGPAQ9UK23 515 aa8.3□□□□□ -1.08
VPS11-209ENST00000622309 NEU2Q9Y3R4 380 aa8.3□□□□□ -1.08
VPS11-209ENST00000622309 HEMK1Q9Y5R4 338 aaPredicted RBP8.3□□□□□ -1.08
VPS11-209ENST00000622309 ABCB11O95342 1321 aa8.3□□□□□ -1.08
VPS11-209ENST00000622309 SNAP23O00161 211 aa8.3□□□□□ -1.08
VPS11-209ENST00000622309 PFDN6O15212 129 aa8.3□□□□□ -1.08
VPS11-209ENST00000622309 TTC4O95801 387 aa8.3□□□□□ -1.08
VPS11-209ENST00000622309 HSPA6P17066 643 aa8.3□□□□□ -1.08
VPS11-209ENST00000622309 CDH2P19022 906 aaPredicted RBP8.3□□□□□ -1.08
VPS11-209ENST00000622309 HOXD10P28358 340 aa8.3□□□□□ -1.08
VPS11-209ENST00000622309 PTGIRP43119 386 aa8.3□□□□□ -1.08
VPS11-209ENST00000622309 ZAP70P43403 619 aa8.3□□□□□ -1.08
VPS11-209ENST00000622309 NCKAP1LP55160 1127 aa8.3□□□□□ -1.08
VPS11-209ENST00000622309 KCNQ4P56696 695 aa8.3□□□□□ -1.08
VPS11-209ENST00000622309 TUBA1BP68363 451 aa8.3□□□□□ -1.08
VPS11-209ENST00000622309 OVGP1Q12889 678 aa8.3□□□□□ -1.08
VPS11-209ENST00000622309 ANKDD1AQ495B1 522 aa8.3□□□□□ -1.08
VPS11-209ENST00000622309 NIPAL1Q6NVV3 410 aa8.3□□□□□ -1.08
VPS11-209ENST00000622309 AAGABQ6PD74 315 aa8.3□□□□□ -1.08
VPS11-209ENST00000622309 TUBA1AQ71U36 451 aa8.3□□□□□ -1.08
VPS11-209ENST00000622309 LPCAT2Q7L5N7 544 aa8.3□□□□□ -1.08
VPS11-209ENST00000622309 NLRP10Q86W26 655 aa8.3□□□□□ -1.08
VPS11-209ENST00000622309 LRRC49Q8IUZ0 686 aa8.3□□□□□ -1.08
VPS11-209ENST00000622309 CENPSQ8N2Z9 138 aa8.3□□□□□ -1.08
VPS11-209ENST00000622309 ZNF280CQ8ND82 737 aa8.3□□□□□ -1.08
VPS11-209ENST00000622309 PPP1R14CQ8TAE6 165 aa8.3□□□□□ -1.08
VPS11-209ENST00000622309 MAELQ96JY0 434 aaKnown RBP8.3□□□□□ -1.08
VPS11-209ENST00000622309 BIRC8Q96P09 236 aa8.3□□□□□ -1.08
VPS11-209ENST00000622309 BTBD9Q96Q07 612 aa8.3□□□□□ -1.08
VPS11-209ENST00000622309 SLC4A9Q96Q91 983 aa8.3□□□□□ -1.08
VPS11-209ENST00000622309 KBTBD4Q9NVX7 518 aa8.3□□□□□ -1.08
VPS11-209ENST00000622309 APPL1Q9UKG1 709 aa8.3□□□□□ -1.08
VPS11-209ENST00000622309 IKBKGQ9Y6K9 419 aa8.3□□□□□ -1.08
VPS11-209ENST00000622309 NUMBLQ9Y6R0 609 aa8.3□□□□□ -1.08
VPS11-209ENST00000622309 GSTTP1A0A1W2PQM5 241 aa8.3□□□□□ -1.08
VPS11-209ENST00000622309 TSPY2A6NKD2 308 aa8.3□□□□□ -1.08
VPS11-209ENST00000622309 K7EPI3 171 aa8.3□□□□□ -1.08
VPS11-209ENST00000622309 EYA2O00167 538 aa8.3□□□□□ -1.08
VPS11-209ENST00000622309 TRPA1O75762 1119 aa8.3□□□□□ -1.08
VPS11-209ENST00000622309 STARD3NLO95772 234 aa8.3□□□□□ -1.08
VPS11-209ENST00000622309 FUCA1P04066 466 aa8.3□□□□□ -1.08
VPS11-209ENST00000622309 TSPY3P0CV98 308 aa8.3□□□□□ -1.08
VPS11-209ENST00000622309 TSPY8P0CW00 308 aa8.3□□□□□ -1.08
VPS11-209ENST00000622309 KRT15P19012 456 aa8.3□□□□□ -1.08
VPS11-209ENST00000622309 GNA11P29992 359 aa8.3□□□□□ -1.08
VPS11-209ENST00000622309 HOXD13P35453 343 aa8.3□□□□□ -1.08
VPS11-209ENST00000622309 KPNA1P52294 538 aaPredicted RBP8.3□□□□□ -1.08
VPS11-209ENST00000622309 C21orf59P57076 290 aa8.3□□□□□ -1.08
VPS11-209ENST00000622309 ARHGAP4P98171 946 aa8.3□□□□□ -1.08
VPS11-209ENST00000622309 TSPY1Q01534 308 aa8.3□□□□□ -1.08
VPS11-209ENST00000622309 LRRC63Q05C16 580 aa8.3□□□□□ -1.08
VPS11-209ENST00000622309 RASGRF1Q13972 1273 aa8.3□□□□□ -1.08
VPS11-209ENST00000622309 SCARF1Q14162 830 aa8.3□□□□□ -1.08
VPS11-209ENST00000622309 E2F2Q14209 437 aa8.3□□□□□ -1.08
VPS11-209ENST00000622309 TXNRD1Q16881 649 aa8.3□□□□□ -1.08
VPS11-209ENST00000622309 CENPPQ6IPU0 288 aa8.3□□□□□ -1.08
VPS11-209ENST00000622309 CYFIP1Q7L576 1253 aa8.3□□□□□ -1.08
VPS11-209ENST00000622309 VASH1Q7L8A9 365 aaPredicted RBP8.3□□□□□ -1.08
VPS11-209ENST00000622309 ADGRG6Q86SQ4 1221 aa8.3□□□□□ -1.08
VPS11-209ENST00000622309 JAZF1Q86VZ6 243 aa8.3□□□□□ -1.08
VPS11-209ENST00000622309 TRIML2Q8N7C3 387 aa8.3□□□□□ -1.08
VPS11-209ENST00000622309 SLC26A7Q8TE54 656 aa8.3□□□□□ -1.08
VPS11-209ENST00000622309 PYDC1Q8WXC3 89 aa8.3□□□□□ -1.08
VPS11-209ENST00000622309 TTC25Q96NG3 672 aa8.3□□□□□ -1.08
VPS11-209ENST00000622309 EHD1Q9H4M9 534 aa8.3□□□□□ -1.08
VPS11-209ENST00000622309 CNNM2Q9H8M5 875 aa8.3□□□□□ -1.08
VPS11-209ENST00000622309 LIN28AQ9H9Z2 209 aaKnown RBP8.3□□□□□ -1.08
VPS11-209ENST00000622309 CLK4Q9HAZ1 481 aaKnown RBP8.3□□□□□ -1.08
VPS11-209ENST00000622309 ZNF304Q9HCX3 659 aa8.3□□□□□ -1.08
VPS11-209ENST00000622309 S100A14Q9HCY8 104 aa8.3□□□□□ -1.08
VPS11-209ENST00000622309 PALMDQ9NP74 551 aa8.3□□□□□ -1.08
VPS11-209ENST00000622309 CNGB3Q9NQW8 809 aa8.3□□□□□ -1.08
VPS11-209ENST00000622309 OLFML3Q9NRN5 406 aa8.3□□□□□ -1.08
VPS11-209ENST00000622309 V9GY48 417 aaPredicted RBP8.3□□□□□ -1.08
VPS11-209ENST00000622309 ARHGAP42A6NI28 874 aa8.29□□□□□ -1.08
VPS11-209ENST00000622309 PP2D1A8MPX8 630 aa8.29□□□□□ -1.08
VPS11-209ENST00000622309 BAIAP3O94812 1187 aa8.29□□□□□ -1.08
VPS11-209ENST00000622309 NOL4O94818 638 aa8.29□□□□□ -1.08
VPS11-209ENST00000622309 ESRRBO95718 433 aa8.29□□□□□ -1.08
VPS11-209ENST00000622309 PEX2P28328 305 aa8.29□□□□□ -1.08
VPS11-209ENST00000622309 HMOX2P30519 316 aa8.29□□□□□ -1.08
VPS11-209ENST00000622309 SERPINB6P35237 376 aa8.29□□□□□ -1.08
VPS11-209ENST00000622309 IL15P40933 162 aaPredicted RBP8.29□□□□□ -1.08
VPS11-209ENST00000622309 TRAPPC10P48553 1259 aa8.29□□□□□ -1.08
VPS11-209ENST00000622309 NR1H3Q13133 447 aa8.29□□□□□ -1.08
VPS11-209ENST00000622309 SDE2Q6IQ49 451 aa8.29□□□□□ -1.08
VPS11-209ENST00000622309 CCBE1Q6UXH8 406 aaPredicted RBP8.29□□□□□ -1.08
VPS11-209ENST00000622309 SMIM5Q71RC9 77 aa8.29□□□□□ -1.08
VPS11-209ENST00000622309 ULK2Q8IYT8 1036 aa8.29□□□□□ -1.08
VPS11-209ENST00000622309 ZNF654Q8IZM8 581 aa8.29□□□□□ -1.08
VPS11-209ENST00000622309 FAM9CQ8IZT9 166 aa8.29□□□□□ -1.08
VPS11-209ENST00000622309 SRBD1Q8N5C6 995 aaKnown RBP8.29□□□□□ -1.08
VPS11-209ENST00000622309 LSM14AQ8ND56 463 aaKnown RBP8.29□□□□□ -1.08
VPS11-209ENST00000622309 C7orf43Q8WVR3 580 aa8.29□□□□□ -1.08
VPS11-209ENST00000622309 STON2Q8WXE9 905 aa8.29□□□□□ -1.08
VPS11-209ENST00000622309 ZNF75CPQ92670 426 aaPredicted RBP8.29□□□□□ -1.08
VPS11-209ENST00000622309 SGIP1Q9BQI5 828 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms