RNA–Protein interactions for RNA: ENST00000622166.1

IGHV3-54-201, Transcript of immunoglobulin heavy variable 3-54 (pseudogene), humanhuman

BASIC

Gene IGHV3-54, Length 353 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-54-201ENST00000622166 TCP11Q8WWU5 503 aa10.15□□□□□ -0.78
IGHV3-54-201ENST00000622166 KLRG1Q96E93 195 aa10.15□□□□□ -0.78
IGHV3-54-201ENST00000622166 FAM167AQ96KS9 214 aa10.15□□□□□ -0.78
IGHV3-54-201ENST00000622166 TGS1Q96RS0 853 aaKnown RBP10.15□□□□□ -0.78
IGHV3-54-201ENST00000622166 ACO2Q99798 780 aaKnown RBP10.15□□□□□ -0.78
IGHV3-54-201ENST00000622166 FAM118BQ9BPY3 351 aa10.15□□□□□ -0.78
IGHV3-54-201ENST00000622166 FHDC1Q9C0D6 1143 aaPredicted RBP10.15□□□□□ -0.78
IGHV3-54-201ENST00000622166 LHX5Q9H2C1 402 aa10.15□□□□□ -0.78
IGHV3-54-201ENST00000622166 ECT2Q9H8V3 914 aa10.15□□□□□ -0.78
IGHV3-54-201ENST00000622166 RXFP1Q9HBX9 757 aa10.15□□□□□ -0.78
IGHV3-54-201ENST00000622166 SSU72Q9NP77 194 aaKnown RBP10.15□□□□□ -0.78
IGHV3-54-201ENST00000622166 ANKFY1Q9P2R3 1169 aa10.15□□□□□ -0.78
IGHV3-54-201ENST00000622166 FETUBQ9UGM5 382 aa10.15□□□□□ -0.78
IGHV3-54-201ENST00000622166 CPSF3Q9UKF6 684 aaKnown RBP10.15□□□□□ -0.78
IGHV3-54-201ENST00000622166 STRIP2Q9ULQ0 834 aa10.15□□□□□ -0.78
IGHV3-54-201ENST00000622166 AGAP1Q9UPQ3 857 aa10.15□□□□□ -0.78
IGHV3-54-201ENST00000622166 SMG5Q9UPR3 1016 aaKnown RBP10.15□□□□□ -0.78
IGHV3-54-201ENST00000622166 ZNF148Q9UQR1 794 aa10.15□□□□□ -0.78
IGHV3-54-201ENST00000622166 AFG3L2Q9Y4W6 797 aa10.15□□□□□ -0.78
IGHV3-54-201ENST00000622166 PPP2R3BQ9Y5P8 575 aa10.15□□□□□ -0.78
IGHV3-54-201ENST00000622166 IVNS1ABPQ9Y6Y0 642 aa10.15□□□□□ -0.78
IGHV3-54-201ENST00000622166 IGKV6-21A0A0C4DH24 114 aa10.14□□□□□ -0.79
IGHV3-54-201ENST00000622166 SIGLEC16A6NMB1 481 aa10.14□□□□□ -0.79
IGHV3-54-201ENST00000622166 FOXO6A8MYZ6 492 aa10.14□□□□□ -0.79
IGHV3-54-201ENST00000622166 F8VP50 259 aa10.14□□□□□ -0.79
IGHV3-54-201ENST00000622166 FZD9O00144 591 aa10.14□□□□□ -0.79
IGHV3-54-201ENST00000622166 SMAPO00193 183 aa10.14□□□□□ -0.79
IGHV3-54-201ENST00000622166 LGR5O75473 907 aa10.14□□□□□ -0.79
IGHV3-54-201ENST00000622166 ASMTLO95671 621 aa10.14□□□□□ -0.79
IGHV3-54-201ENST00000622166 TGFB3P10600 412 aa10.14□□□□□ -0.79
IGHV3-54-201ENST00000622166 ALADP13716 330 aa10.14□□□□□ -0.79
IGHV3-54-201ENST00000622166 PECAM1P16284 738 aaPredicted RBP10.14□□□□□ -0.79
IGHV3-54-201ENST00000622166 UBA1P22314 1058 aaKnown RBP10.14□□□□□ -0.79
IGHV3-54-201ENST00000622166 PROZP22891 400 aa10.14□□□□□ -0.79
IGHV3-54-201ENST00000622166 BRD2P25440 801 aaKnown RBP10.14□□□□□ -0.79
IGHV3-54-201ENST00000622166 SSTR3P32745 418 aaPredicted RBP10.14□□□□□ -0.79
IGHV3-54-201ENST00000622166 TNFSF9P41273 254 aa10.14□□□□□ -0.79
IGHV3-54-201ENST00000622166 SKIV2L2P42285 1042 aaKnown RBP10.14□□□□□ -0.79
IGHV3-54-201ENST00000622166 ARSEP51690 589 aa10.14□□□□□ -0.79
IGHV3-54-201ENST00000622166 STAT5BP51692 787 aa10.14□□□□□ -0.79
IGHV3-54-201ENST00000622166 WDR4P57081 412 aaKnown RBP10.14□□□□□ -0.79
IGHV3-54-201ENST00000622166 IL9RQ01113 521 aa10.14□□□□□ -0.79
IGHV3-54-201ENST00000622166 CNTN2Q02246 1040 aa10.14□□□□□ -0.79
IGHV3-54-201ENST00000622166 FSTL1Q12841 308 aa10.14□□□□□ -0.79
IGHV3-54-201ENST00000622166 GPS1Q13098 491 aa10.14□□□□□ -0.79
IGHV3-54-201ENST00000622166 CBLBQ13191 982 aa10.14□□□□□ -0.79
IGHV3-54-201ENST00000622166 DUOXA2Q1HG44 320 aa10.14□□□□□ -0.79
IGHV3-54-201ENST00000622166 FAM133BQ5BKY9 247 aaKnown RBP10.14□□□□□ -0.79
IGHV3-54-201ENST00000622166 EFHC2Q5JST6 749 aa10.14□□□□□ -0.79
IGHV3-54-201ENST00000622166 SCARA3Q6AZY7 606 aa10.14□□□□□ -0.79
IGHV3-54-201ENST00000622166 GPAT2Q6NUI2 795 aa10.14□□□□□ -0.79
IGHV3-54-201ENST00000622166 DCUN1D2Q6PH85 259 aa10.14□□□□□ -0.79
IGHV3-54-201ENST00000622166 SEPT14Q6ZU15 432 aa10.14□□□□□ -0.79
IGHV3-54-201ENST00000622166 BBS12Q6ZW61 710 aa10.14□□□□□ -0.79
IGHV3-54-201ENST00000622166 CENPUQ71F23 418 aa10.14□□□□□ -0.79
IGHV3-54-201ENST00000622166 PRUNE1Q86TP1 453 aa10.14□□□□□ -0.79
IGHV3-54-201ENST00000622166 ERICH1Q86X53 443 aa10.14□□□□□ -0.79
IGHV3-54-201ENST00000622166 SRRM1Q8IYB3 904 aaKnown RBP10.14□□□□□ -0.79
IGHV3-54-201ENST00000622166 GLIS1Q8NBF1 620 aa10.14□□□□□ -0.79
IGHV3-54-201ENST00000622166 TTC13Q8NBP0 860 aa10.14□□□□□ -0.79
IGHV3-54-201ENST00000622166 GDAP1Q8TB36 358 aa10.14□□□□□ -0.79
IGHV3-54-201ENST00000622166 FNIP1Q8TF40 1166 aa10.14□□□□□ -0.79
IGHV3-54-201ENST00000622166 PRPF31Q8WWY3 499 aaKnown RBP10.14□□□□□ -0.79
IGHV3-54-201ENST00000622166 SEPT1Q8WYJ6 367 aa10.14□□□□□ -0.79
IGHV3-54-201ENST00000622166 TFAP2BQ92481 460 aa10.14□□□□□ -0.79
IGHV3-54-201ENST00000622166 PRCCQ92733 491 aaPredicted RBP10.14□□□□□ -0.79
IGHV3-54-201ENST00000622166 MCEEQ96PE7 176 aa10.14□□□□□ -0.79
IGHV3-54-201ENST00000622166 C2orf40Q9H1Z8 148 aa10.14□□□□□ -0.79
IGHV3-54-201ENST00000622166 TRABDQ9H4I3 376 aa10.14□□□□□ -0.79
IGHV3-54-201ENST00000622166 NOD2Q9HC29 1040 aa10.14□□□□□ -0.79
IGHV3-54-201ENST00000622166 CISHQ9NSE2 258 aa10.14□□□□□ -0.79
IGHV3-54-201ENST00000622166 ZMYND8Q9ULU4 1186 aaPredicted RBP10.14□□□□□ -0.79
IGHV3-54-201ENST00000622166 STARD13Q9Y3M8 1113 aa10.14□□□□□ -0.79
IGHV3-54-201ENST00000622166 A0A1B0GUA9 196 aa10.13□□□□□ -0.79
IGHV3-54-201ENST00000622166 EXOC1LA0A1B0GW35 172 aa10.13□□□□□ -0.79
IGHV3-54-201ENST00000622166 SOWAHBA6NEL2 793 aa10.13□□□□□ -0.79
IGHV3-54-201ENST00000622166 TTLL13PA6NNM8 815 aa10.13□□□□□ -0.79
IGHV3-54-201ENST00000622166 RASA4BC9J798 803 aa10.13□□□□□ -0.79
IGHV3-54-201ENST00000622166 RASA4O43374 803 aa10.13□□□□□ -0.79
IGHV3-54-201ENST00000622166 B4GALT4O60513 344 aa10.13□□□□□ -0.79
IGHV3-54-201ENST00000622166 GH1P01241 217 aa10.13□□□□□ -0.79
IGHV3-54-201ENST00000622166 PRKCBP05771 671 aa10.13□□□□□ -0.79
IGHV3-54-201ENST00000622166 KRT7P08729 469 aa10.13□□□□□ -0.79
IGHV3-54-201ENST00000622166 HOXC6P09630 235 aa10.13□□□□□ -0.79
IGHV3-54-201ENST00000622166 WEE2P0C1S8 567 aa10.13□□□□□ -0.79
IGHV3-54-201ENST00000622166 ZSCAN5DPP0CG00 497 aa10.13□□□□□ -0.79
IGHV3-54-201ENST00000622166 ETS1P14921 441 aa10.13□□□□□ -0.79
IGHV3-54-201ENST00000622166 ATF7P17544 494 aaPredicted RBP10.13□□□□□ -0.79
IGHV3-54-201ENST00000622166 POLR2BP30876 1174 aaKnown RBP10.13□□□□□ -0.79
IGHV3-54-201ENST00000622166 SPARCL1Q14515 664 aa10.13□□□□□ -0.79
IGHV3-54-201ENST00000622166 MXD4Q14582 209 aaPredicted RBP10.13□□□□□ -0.79
IGHV3-54-201ENST00000622166 TMED2Q15363 201 aa10.13□□□□□ -0.79
IGHV3-54-201ENST00000622166 SEZ6Q53EL9 994 aa10.13□□□□□ -0.79
IGHV3-54-201ENST00000622166 KAZNQ674X7 775 aa10.13□□□□□ -0.79
IGHV3-54-201ENST00000622166 CYP4F22Q6NT55 531 aa10.13□□□□□ -0.79
IGHV3-54-201ENST00000622166 DENND1BQ6P3S1 775 aa10.13□□□□□ -0.79
IGHV3-54-201ENST00000622166 LBX2Q6XYB7 198 aa10.13□□□□□ -0.79
IGHV3-54-201ENST00000622166 ASRGL1Q7L266 308 aa10.13□□□□□ -0.79
IGHV3-54-201ENST00000622166 ZBTB8OSQ8IWT0 167 aa10.13□□□□□ -0.79
IGHV3-54-201ENST00000622166 THNSL1Q8IYQ7 743 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms