RNA–Protein interactions for RNA: ENST00000621526.4

CPNE3-211, Transcript of copine 3, humanhuman

TSL 3

Gene CPNE3, Length 279 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-211ENST00000621526 INAVAQ3KP66 663 aa2.61□□□□□ -1.99
CPNE3-211ENST00000621526 LINC00303Q3SY05 128 aa2.61□□□□□ -1.99
CPNE3-211ENST00000621526 MTERF2Q49AM1 385 aa2.61□□□□□ -1.99
CPNE3-211ENST00000621526 CTXN3Q4LDR2 81 aa2.61□□□□□ -1.99
CPNE3-211ENST00000621526 SGO2Q562F6 1265 aa2.61□□□□□ -1.99
CPNE3-211ENST00000621526 PPP1R18Q6NYC8 613 aa2.61□□□□□ -1.99
CPNE3-211ENST00000621526 FBXL19Q6PCT2 694 aa2.61□□□□□ -1.99
CPNE3-211ENST00000621526 ALKAL1Q6UXT8 129 aa2.61□□□□□ -1.99
CPNE3-211ENST00000621526 PPP4R3CPQ6ZMV5 832 aa2.61□□□□□ -1.99
CPNE3-211ENST00000621526 RNF19BQ6ZMZ0 732 aa2.61□□□□□ -1.99
CPNE3-211ENST00000621526 ARMCX6Q7L4S7 300 aa2.61□□□□□ -1.99
CPNE3-211ENST00000621526 OTUD6AQ7L8S5 288 aa2.61□□□□□ -1.99
CPNE3-211ENST00000621526 KANSL1Q7Z3B3 1105 aa2.61□□□□□ -1.99
CPNE3-211ENST00000621526 TRMT11Q7Z4G4 463 aaKnown RBP2.61□□□□□ -1.99
CPNE3-211ENST00000621526 SGMS1Q86VZ5 419 aa2.61□□□□□ -1.99
CPNE3-211ENST00000621526 GPIHBP1Q8IV16 184 aa2.61□□□□□ -1.99
CPNE3-211ENST00000621526 SLC41A1Q8IVJ1 513 aa2.61□□□□□ -1.99
CPNE3-211ENST00000621526 RGL4Q8IZJ4 473 aa2.61□□□□□ -1.99
CPNE3-211ENST00000621526 PGBD3Q8N328 593 aa2.61□□□□□ -1.99
CPNE3-211ENST00000621526 SRBD1Q8N5C6 995 aaKnown RBP2.61□□□□□ -1.99
CPNE3-211ENST00000621526 CCDC33Q8N5R6 958 aa2.61□□□□□ -1.99
CPNE3-211ENST00000621526 ZNF713Q8N859 430 aaPredicted RBP2.61□□□□□ -1.99
CPNE3-211ENST00000621526 DCBLD1Q8N8Z6 715 aa2.61□□□□□ -1.99
CPNE3-211ENST00000621526 TXNDC5Q8NBS9 432 aaKnown RBP2.61□□□□□ -1.99
CPNE3-211ENST00000621526 RNF149Q8NC42 400 aa2.61□□□□□ -1.99
CPNE3-211ENST00000621526 SLC5A5Q92911 643 aa2.61□□□□□ -1.99
CPNE3-211ENST00000621526 USP13Q92995 863 aaPredicted RBP2.61□□□□□ -1.99
CPNE3-211ENST00000621526 ATP2A3Q93084 1043 aa2.61□□□□□ -1.99
CPNE3-211ENST00000621526 IGSF8Q969P0 613 aa2.61□□□□□ -1.99
CPNE3-211ENST00000621526 SUSD3Q96L08 255 aa2.61□□□□□ -1.99
CPNE3-211ENST00000621526 FAM227BQ96M60 508 aa2.61□□□□□ -1.99
CPNE3-211ENST00000621526 FAM20AQ96MK3 541 aa2.61□□□□□ -1.99
CPNE3-211ENST00000621526 PPP1R10Q96QC0 940 aaKnown RBP2.61□□□□□ -1.99
CPNE3-211ENST00000621526 MTMR9Q96QG7 549 aa2.61□□□□□ -1.99
CPNE3-211ENST00000621526 PNKPQ96T60 521 aa2.61□□□□□ -1.99
CPNE3-211ENST00000621526 SLC4A5Q9BY07 1137 aa2.61□□□□□ -1.99
CPNE3-211ENST00000621526 ANO3Q9BYT9 981 aa2.61□□□□□ -1.99
CPNE3-211ENST00000621526 PCED1AQ9H1Q7 454 aa2.61□□□□□ -1.99
CPNE3-211ENST00000621526 DNAJC25Q9H1X3 360 aa2.61□□□□□ -1.99
CPNE3-211ENST00000621526 IL21Q9HBE4 155 aa2.61□□□□□ -1.99
CPNE3-211ENST00000621526 CPNE5Q9HCH3 593 aa2.61□□□□□ -1.99
CPNE3-211ENST00000621526 ITM2CQ9NQX7 267 aa2.61□□□□□ -1.99
CPNE3-211ENST00000621526 SLC38A7Q9NVC3 462 aa2.61□□□□□ -1.99
CPNE3-211ENST00000621526 DUS2Q9NX74 493 aaKnown RBP2.61□□□□□ -1.99
CPNE3-211ENST00000621526 WSB2Q9NYS7 404 aaPredicted RBP2.61□□□□□ -1.99
CPNE3-211ENST00000621526 KLK14Q9P0G3 267 aa2.61□□□□□ -1.99
CPNE3-211ENST00000621526 BCCIPQ9P287 314 aaKnown RBP eCLIP2.61□□□□□ -1.99
CPNE3-211ENST00000621526 PLEKHB1Q9UF11 243 aaPredicted RBP2.61□□□□□ -1.99
CPNE3-211ENST00000621526 WDR3Q9UNX4 943 aaKnown RBP eCLIP2.61□□□□□ -1.99
CPNE3-211ENST00000621526 STARD13Q9Y3M8 1113 aa2.61□□□□□ -1.99
CPNE3-211ENST00000621526 GTF3C5Q9Y5Q8 519 aaPredicted RBP2.61□□□□□ -1.99
CPNE3-211ENST00000621526 WNT6Q9Y6F9 365 aa2.61□□□□□ -1.99
CPNE3-211ENST00000621526 KIAA1217Q5T5P2 1943 aa2.61□□□□□ -1.99
CPNE3-211ENST00000621526 NF1P21359 2839 aa2.61□□□□□ -1.99
CPNE3-211ENST00000621526 RALGAPA1Q6GYQ0 2036 aa2.61□□□□□ -1.99
CPNE3-211ENST00000621526 MYO5AQ9Y4I1 1855 aaKnown RBP2.6□□□□□ -1.99
CPNE3-211ENST00000621526 ABCA7Q8IZY2 2146 aa2.6□□□□□ -1.99
CPNE3-211ENST00000621526 LRBAP50851 2863 aa2.6□□□□□ -1.99
CPNE3-211ENST00000621526 MIA3Q5JRA6 1907 aa2.6□□□□□ -1.99
CPNE3-211ENST00000621526 GON4LQ3T8J9 2241 aa2.6□□□□□ -1.99
CPNE3-211ENST00000621526 CYP3A7-CYP3A51PA0A087WV96 503 aa2.6□□□□□ -1.99
CPNE3-211ENST00000621526 A0A0D9SFI3 127 aa2.6□□□□□ -1.99
CPNE3-211ENST00000621526 SMIM28A0A1B0GU29 152 aa2.6□□□□□ -1.99
CPNE3-211ENST00000621526 E2F8A0AVK6 867 aa2.6□□□□□ -1.99
CPNE3-211ENST00000621526 BLACEA4D250 179 aa2.6□□□□□ -1.99
CPNE3-211ENST00000621526 GOLGA8CPA6NN73 597 aa2.6□□□□□ -1.99
CPNE3-211ENST00000621526 PALM2-AKAP2B1ALY0 433 aaPredicted RBP2.6□□□□□ -1.99
CPNE3-211ENST00000621526 INO80B-WBP1J3KQ70 363 aa2.6□□□□□ -1.99
CPNE3-211ENST00000621526 M0QZQ0 153 aa2.6□□□□□ -1.99
CPNE3-211ENST00000621526 GFRA2O00451 464 aa2.6□□□□□ -1.99
CPNE3-211ENST00000621526 ENC1O14682 589 aa2.6□□□□□ -1.99
CPNE3-211ENST00000621526 MSH4O15457 936 aa2.6□□□□□ -1.99
CPNE3-211ENST00000621526 ADAM23O75077 832 aa2.6□□□□□ -1.99
CPNE3-211ENST00000621526 NDUFS2O75306 463 aa2.6□□□□□ -1.99
CPNE3-211ENST00000621526 RFPL3O75679 317 aa2.6□□□□□ -1.99
CPNE3-211ENST00000621526 PSMD10O75832 226 aa2.6□□□□□ -1.99
CPNE3-211ENST00000621526 GJB6O95452 261 aa2.6□□□□□ -1.99
CPNE3-211ENST00000621526 PRAMEF12O95522 483 aa2.6□□□□□ -1.99
CPNE3-211ENST00000621526 NFATC1O95644 943 aa2.6□□□□□ -1.99
CPNE3-211ENST00000621526 LDOC1O95751 146 aaPredicted RBP2.6□□□□□ -1.99
CPNE3-211ENST00000621526 P4HBP07237 508 aaKnown RBP2.6□□□□□ -1.99
CPNE3-211ENST00000621526 NFICP08651 508 aa2.6□□□□□ -1.99
CPNE3-211ENST00000621526 C7P10643 843 aa2.6□□□□□ -1.99
CPNE3-211ENST00000621526 XRCC6P12956 609 aaKnown RBP eCLIP2.6□□□□□ -1.99
CPNE3-211ENST00000621526 ARSAP15289 507 aa2.6□□□□□ -1.99
CPNE3-211ENST00000621526 KCNE1P15382 129 aa2.6□□□□□ -1.99
CPNE3-211ENST00000621526 CKMT2P17540 419 aa2.6□□□□□ -1.99
CPNE3-211ENST00000621526 PFKLP17858 780 aa2.6□□□□□ -1.99
CPNE3-211ENST00000621526 GABRG2P18507 467 aa2.6□□□□□ -1.99
CPNE3-211ENST00000621526 GLDCP23378 1020 aa2.6□□□□□ -1.99
CPNE3-211ENST00000621526 CYP3A7P24462 503 aa2.6□□□□□ -1.99
CPNE3-211ENST00000621526 IGFBP6P24592 240 aaPredicted RBP2.6□□□□□ -1.99
CPNE3-211ENST00000621526 MAOBP27338 520 aa2.6□□□□□ -1.99
CPNE3-211ENST00000621526 TNFRSF8P28908 595 aa2.6□□□□□ -1.99
CPNE3-211ENST00000621526 CD6P30203 668 aa2.6□□□□□ -1.99
CPNE3-211ENST00000621526 OXTRP30559 389 aa2.6□□□□□ -1.99
CPNE3-211ENST00000621526 ARL2P36404 184 aa2.6□□□□□ -1.99
CPNE3-211ENST00000621526 OPRD1P41143 372 aa2.6□□□□□ -1.99
CPNE3-211ENST00000621526 CASRP41180 1078 aa2.6□□□□□ -1.99
CPNE3-211ENST00000621526 MLLT3P42568 568 aaPredicted RBP2.6□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms