RNA–Protein interactions for RNA: ENST00000621093.4

POLR2J3-221, Transcript of RNA polymerase II subunit J3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene POLR2J3, Length 348 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-221ENST00000621093 ZNF394Q53GI3 561 aa11.68□□□□□ -0.54
POLR2J3-221ENST00000621093 KLHDC7AQ5VTJ3 777 aa11.68□□□□□ -0.54
POLR2J3-221ENST00000621093 PDE12Q6L8Q7 609 aaKnown RBP11.68□□□□□ -0.54
POLR2J3-221ENST00000621093 SPATA31D4Q6ZUB0 917 aa11.68□□□□□ -0.54
POLR2J3-221ENST00000621093 THEM5Q8N1Q8 247 aa11.68□□□□□ -0.54
POLR2J3-221ENST00000621093 ERGIC2Q96RQ1 377 aa11.68□□□□□ -0.54
POLR2J3-221ENST00000621093 GAS2L1Q99501 681 aaPredicted RBP11.68□□□□□ -0.54
POLR2J3-221ENST00000621093 ELOVL4Q9GZR5 314 aa11.68□□□□□ -0.54
POLR2J3-221ENST00000621093 ZCWPW1Q9H0M4 648 aa11.68□□□□□ -0.54
POLR2J3-221ENST00000621093 GANQ9H2C0 597 aa11.68□□□□□ -0.54
POLR2J3-221ENST00000621093 NSUN3Q9H649 340 aaKnown RBP11.68□□□□□ -0.54
POLR2J3-221ENST00000621093 IGFLR1Q9H665 355 aa11.68□□□□□ -0.54
POLR2J3-221ENST00000621093 CYP3A43Q9HB55 503 aa11.68□□□□□ -0.54
POLR2J3-221ENST00000621093 CRTAC1Q9NQ79 661 aa11.68□□□□□ -0.54
POLR2J3-221ENST00000621093 CISHQ9NSE2 258 aa11.68□□□□□ -0.54
POLR2J3-221ENST00000621093 FAM207AQ9NSI2 230 aaPredicted RBP11.68□□□□□ -0.54
POLR2J3-221ENST00000621093 FNIP2Q9P278 1114 aa11.68□□□□□ -0.54
POLR2J3-221ENST00000621093 APEX2Q9UBZ4 518 aa11.68□□□□□ -0.54
POLR2J3-221ENST00000621093 STK39Q9UEW8 545 aa11.68□□□□□ -0.54
POLR2J3-221ENST00000621093 DNAJC12Q9UKB3 198 aa11.68□□□□□ -0.54
POLR2J3-221ENST00000621093 SSX2IPQ9Y2D8 614 aa11.68□□□□□ -0.54
POLR2J3-221ENST00000621093 STXBP5LQ9Y2K9 1186 aa11.68□□□□□ -0.54
POLR2J3-221ENST00000621093 IRAK3Q9Y616 596 aa11.68□□□□□ -0.54
POLR2J3-221ENST00000621093 C2orf16Q68DN1 1984 aa11.68□□□□□ -0.54
POLR2J3-221ENST00000621093 GREB1Q4ZG55 1949 aa11.68□□□□□ -0.54
POLR2J3-221ENST00000621093 LAMA3Q16787 3333 aa11.68□□□□□ -0.54
POLR2J3-221ENST00000621093 WDR27A2RRH5 827 aa11.67□□□□□ -0.54
POLR2J3-221ENST00000621093 MYBPHLA2RUH7 354 aa11.67□□□□□ -0.54
POLR2J3-221ENST00000621093 RNF225M0QZC1 329 aaPredicted RBP11.67□□□□□ -0.54
POLR2J3-221ENST00000621093 LINC01565O15544 149 aa11.67□□□□□ -0.54
POLR2J3-221ENST00000621093 CILPO75339 1184 aa11.67□□□□□ -0.54
POLR2J3-221ENST00000621093 VNN2O95498 520 aa11.67□□□□□ -0.54
POLR2J3-221ENST00000621093 EPCAMP16422 314 aa11.67□□□□□ -0.54
POLR2J3-221ENST00000621093 POU3F3P20264 500 aaPredicted RBP11.67□□□□□ -0.54
POLR2J3-221ENST00000621093 KLRC2P26717 231 aa11.67□□□□□ -0.54
POLR2J3-221ENST00000621093 PBX1P40424 430 aa11.67□□□□□ -0.54
POLR2J3-221ENST00000621093 LHX1P48742 406 aa11.67□□□□□ -0.54
POLR2J3-221ENST00000621093 NDUFV1P49821 464 aa11.67□□□□□ -0.54
POLR2J3-221ENST00000621093 INCA1Q0VD86 236 aa11.67□□□□□ -0.54
POLR2J3-221ENST00000621093 HYAL1Q12794 435 aa11.67□□□□□ -0.54
POLR2J3-221ENST00000621093 BMS1Q14692 1282 aaKnown RBP11.67□□□□□ -0.54
POLR2J3-221ENST00000621093 CCDC85BQ15834 202 aaPredicted RBP11.67□□□□□ -0.54
POLR2J3-221ENST00000621093 DUSP6Q16828 381 aa11.67□□□□□ -0.54
POLR2J3-221ENST00000621093 SLC8B1Q6J4K2 584 aa11.67□□□□□ -0.54
POLR2J3-221ENST00000621093 LLGL2Q6P1M3 1020 aa11.67□□□□□ -0.54
POLR2J3-221ENST00000621093 PDXDC1Q6P996 788 aa11.67□□□□□ -0.54
POLR2J3-221ENST00000621093 RNF19BQ6ZMZ0 732 aa11.67□□□□□ -0.54
POLR2J3-221ENST00000621093 ACOT1Q86TX2 421 aa11.67□□□□□ -0.54
POLR2J3-221ENST00000621093 GPIHBP1Q8IV16 184 aa11.67□□□□□ -0.54
POLR2J3-221ENST00000621093 GPR65Q8IYL9 337 aa11.67□□□□□ -0.54
POLR2J3-221ENST00000621093 VN1R2Q8NFZ6 395 aa11.67□□□□□ -0.54
POLR2J3-221ENST00000621093 SLC22A17Q8WUG5 538 aa11.67□□□□□ -0.54
POLR2J3-221ENST00000621093 PGLYRP2Q96PD5 576 aa11.67□□□□□ -0.54
POLR2J3-221ENST00000621093 PKMYT1Q99640 499 aa11.67□□□□□ -0.54
POLR2J3-221ENST00000621093 SYT15Q9BQS2 421 aa11.67□□□□□ -0.54
POLR2J3-221ENST00000621093 EMILIN2Q9BXX0 1053 aa11.67□□□□□ -0.54
POLR2J3-221ENST00000621093 TLE6Q9H808 572 aa11.67□□□□□ -0.54
POLR2J3-221ENST00000621093 NLRC4Q9NPP4 1024 aa11.67□□□□□ -0.54
POLR2J3-221ENST00000621093 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP11.67□□□□□ -0.54
POLR2J3-221ENST00000621093 LMCD1Q9NZU5 365 aa11.67□□□□□ -0.54
POLR2J3-221ENST00000621093 GTF3C4Q9UKN8 822 aa11.67□□□□□ -0.54
POLR2J3-221ENST00000621093 PCDHB4Q9Y5E5 795 aa11.67□□□□□ -0.54
POLR2J3-221ENST00000621093 DOCK6Q96HP0 2047 aa11.67□□□□□ -0.54
POLR2J3-221ENST00000621093 TRANK1O15050 2925 aa11.66□□□□□ -0.54
POLR2J3-221ENST00000621093 PATJQ8NI35 1801 aa11.66□□□□□ -0.54
POLR2J3-221ENST00000621093 OR6C75A6NL08 312 aa11.66□□□□□ -0.54
POLR2J3-221ENST00000621093 TGM5O43548 720 aa11.66□□□□□ -0.54
POLR2J3-221ENST00000621093 FAM163BP0C2L3 166 aa11.66□□□□□ -0.54
POLR2J3-221ENST00000621093 CPB1P15086 417 aa11.66□□□□□ -0.54
POLR2J3-221ENST00000621093 UCHL3P15374 230 aa11.66□□□□□ -0.54
POLR2J3-221ENST00000621093 FOSL2P15408 326 aa11.66□□□□□ -0.54
POLR2J3-221ENST00000621093 PTPN1P18031 435 aaKnown RBP11.66□□□□□ -0.54
POLR2J3-221ENST00000621093 TBXAS1P24557 533 aaPredicted RBP11.66□□□□□ -0.54
POLR2J3-221ENST00000621093 CLCN4P51793 760 aa11.66□□□□□ -0.54
POLR2J3-221ENST00000621093 RAD23BP54727 409 aa11.66□□□□□ -0.54
POLR2J3-221ENST00000621093 POLR2FP61218 127 aaKnown RBP11.66□□□□□ -0.54
POLR2J3-221ENST00000621093 GCNT1Q02742 428 aa11.66□□□□□ -0.54
POLR2J3-221ENST00000621093 RAB33AQ14088 237 aa11.66□□□□□ -0.54
POLR2J3-221ENST00000621093 SLC39A12Q504Y0 691 aa11.66□□□□□ -0.54
POLR2J3-221ENST00000621093 MDH1BQ5I0G3 518 aa11.66□□□□□ -0.54
POLR2J3-221ENST00000621093 INTS6LQ5JSJ4 861 aaKnown RBP11.66□□□□□ -0.54
POLR2J3-221ENST00000621093 LILRA6Q6PI73 481 aa11.66□□□□□ -0.54
POLR2J3-221ENST00000621093 TTC9BQ8N6N2 239 aa11.66□□□□□ -0.54
POLR2J3-221ENST00000621093 SLC4A11Q8NBS3 891 aa11.66□□□□□ -0.54
POLR2J3-221ENST00000621093 NEK11Q8NG66 645 aa11.66□□□□□ -0.54
POLR2J3-221ENST00000621093 FEZF2Q8TBJ5 459 aa11.66□□□□□ -0.54
POLR2J3-221ENST00000621093 SPATA18Q8TC71 538 aa11.66□□□□□ -0.54
POLR2J3-221ENST00000621093 PPM1EQ8WY54 764 aa11.66□□□□□ -0.54
POLR2J3-221ENST00000621093 FAXDC2Q96IV6 333 aa11.66□□□□□ -0.54
POLR2J3-221ENST00000621093 ACBD6Q9BR61 282 aa11.66□□□□□ -0.54
POLR2J3-221ENST00000621093 NAA15Q9BXJ9 866 aaKnown RBP11.66□□□□□ -0.54
POLR2J3-221ENST00000621093 RHOBTB2Q9BYZ6 727 aa11.66□□□□□ -0.54
POLR2J3-221ENST00000621093 GPR88Q9GZN0 384 aa11.66□□□□□ -0.54
POLR2J3-221ENST00000621093 CRISPLD1Q9H336 500 aa11.66□□□□□ -0.54
POLR2J3-221ENST00000621093 PLCB1Q9NQ66 1216 aa11.66□□□□□ -0.54
POLR2J3-221ENST00000621093 CDH9Q9ULB4 789 aa11.66□□□□□ -0.54
POLR2J3-221ENST00000621093 BARX2Q9UMQ3 279 aaPredicted RBP11.66□□□□□ -0.54
POLR2J3-221ENST00000621093 ZNF638Q14966 1978 aaKnown RBP11.65□□□□□ -0.54
POLR2J3-221ENST00000621093 A0A1W2PQC6 194 aa11.65□□□□□ -0.54
POLR2J3-221ENST00000621093 MTMR11A4FU01 709 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms