RNA–Protein interactions for RNA: ENST00000620992.4

PTPDC1-204, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PTPDC1, Length 4,437 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-204ENST00000620992 DBR1Q9UK59 544 aaKnown RBP8.7□□□□□ -1.02
PTPDC1-204ENST00000620992 DIS3Q9Y2L1 958 aaKnown RBP8.7□□□□□ -1.02
PTPDC1-204ENST00000620992 DYNC1LI1Q9Y6G9 523 aaKnown RBP8.7□□□□□ -1.02
PTPDC1-204ENST00000620992 ARFGEF1Q9Y6D6 1849 aa8.7□□□□□ -1.02
PTPDC1-204ENST00000620992 FRMPD4Q14CM0 1322 aa8.7□□□□□ -1.02
PTPDC1-204ENST00000620992 FAM187AA6NFU0 413 aa8.7□□□□□ -1.02
PTPDC1-204ENST00000620992 PHF2O75151 1096 aa8.7□□□□□ -1.02
PTPDC1-204ENST00000620992 CYP3A4P08684 503 aa8.7□□□□□ -1.02
PTPDC1-204ENST00000620992 VCAM1P19320 739 aa8.7□□□□□ -1.02
PTPDC1-204ENST00000620992 RPL21P46778 160 aaKnown RBP8.7□□□□□ -1.02
PTPDC1-204ENST00000620992 DHX34Q14147 1143 aaKnown RBP8.7□□□□□ -1.02
PTPDC1-204ENST00000620992 DUPD1Q68J44 220 aa8.7□□□□□ -1.02
PTPDC1-204ENST00000620992 PID1Q7Z2X4 250 aa8.7□□□□□ -1.02
PTPDC1-204ENST00000620992 ERO1BQ86YB8 467 aa8.7□□□□□ -1.02
PTPDC1-204ENST00000620992 ELAC2Q9BQ52 826 aaKnown RBP8.7□□□□□ -1.02
PTPDC1-204ENST00000620992 NUP85Q9BW27 656 aa8.7□□□□□ -1.02
PTPDC1-204ENST00000620992 IDI2Q9BXS1 227 aa8.7□□□□□ -1.02
PTPDC1-204ENST00000620992 NUF2Q9BZD4 464 aa8.7□□□□□ -1.02
PTPDC1-204ENST00000620992 GPR88Q9GZN0 384 aa8.7□□□□□ -1.02
PTPDC1-204ENST00000620992 RNF208Q9H0X6 261 aa8.7□□□□□ -1.02
PTPDC1-204ENST00000620992 VPS11Q9H270 941 aa8.7□□□□□ -1.02
PTPDC1-204ENST00000620992 SLC40A1Q9NP59 571 aa8.7□□□□□ -1.02
PTPDC1-204ENST00000620992 ALG13Q9NP73 1137 aaKnown RBP8.7□□□□□ -1.02
PTPDC1-204ENST00000620992 SETD4Q9NVD3 440 aa8.7□□□□□ -1.02
PTPDC1-204ENST00000620992 PPFIA2O75334 1257 aa8.7□□□□□ -1.02
PTPDC1-204ENST00000620992 DGAT1O75907 488 aa8.7□□□□□ -1.02
PTPDC1-204ENST00000620992 MT-ND3P03897 115 aa8.7□□□□□ -1.02
PTPDC1-204ENST00000620992 TROVE2P10155 538 aaKnown RBP eCLIP8.7□□□□□ -1.02
PTPDC1-204ENST00000620992 CHRNA3P32297 505 aa8.7□□□□□ -1.02
PTPDC1-204ENST00000620992 BACE1P56817 501 aa8.7□□□□□ -1.02
PTPDC1-204ENST00000620992 ACTR2P61160 394 aa8.7□□□□□ -1.02
PTPDC1-204ENST00000620992 VEPH1Q14D04 833 aa8.7□□□□□ -1.02
PTPDC1-204ENST00000620992 EMC2Q15006 297 aa8.7□□□□□ -1.02
PTPDC1-204ENST00000620992 LRRC14Q15048 493 aa8.7□□□□□ -1.02
PTPDC1-204ENST00000620992 LY6KQ17RY6 165 aa8.7□□□□□ -1.02
PTPDC1-204ENST00000620992 DACT2Q5SW24 774 aa8.7□□□□□ -1.02
PTPDC1-204ENST00000620992 DDX53Q86TM3 631 aaKnown RBP8.7□□□□□ -1.02
PTPDC1-204ENST00000620992 CCNYL1Q8N7R7 359 aa8.7□□□□□ -1.02
PTPDC1-204ENST00000620992 CCDC197Q8NCU1 140 aa8.7□□□□□ -1.02
PTPDC1-204ENST00000620992 ZNF564Q8TBZ8 553 aaPredicted RBP8.7□□□□□ -1.02
PTPDC1-204ENST00000620992 LRRC8CQ8TDW0 803 aa8.7□□□□□ -1.02
PTPDC1-204ENST00000620992 CFAP57Q96MR6 1250 aa8.7□□□□□ -1.02
PTPDC1-204ENST00000620992 POP1Q99575 1024 aaKnown RBP8.7□□□□□ -1.02
PTPDC1-204ENST00000620992 OSMRQ99650 979 aa8.7□□□□□ -1.02
PTPDC1-204ENST00000620992 PRMT1Q99873 361 aaKnown RBP8.7□□□□□ -1.02
PTPDC1-204ENST00000620992 SAYSD1Q9NPB0 183 aa8.7□□□□□ -1.02
PTPDC1-204ENST00000620992 ADARB2Q9NS39 739 aaKnown RBP8.7□□□□□ -1.02
PTPDC1-204ENST00000620992 HSPBP1Q9NZL4 362 aa8.7□□□□□ -1.02
PTPDC1-204ENST00000620992 GGT7Q9UJ14 662 aa8.7□□□□□ -1.02
PTPDC1-204ENST00000620992 TCRBV7S2A1N4TA0A589 114 aa8.7□□□□□ -1.02
PTPDC1-204ENST00000620992 MIF4GDA9UHW6 222 aaKnown RBP8.7□□□□□ -1.02
PTPDC1-204ENST00000620992 RASGRF2O14827 1237 aa8.7□□□□□ -1.02
PTPDC1-204ENST00000620992 KIAA0391O15091 583 aaKnown RBP8.7□□□□□ -1.02
PTPDC1-204ENST00000620992 PYGMP11217 842 aa8.7□□□□□ -1.02
PTPDC1-204ENST00000620992 SOX11P35716 441 aa8.7□□□□□ -1.02
PTPDC1-204ENST00000620992 FNTAP49354 379 aa8.7□□□□□ -1.02
PTPDC1-204ENST00000620992 CSE1LP55060 971 aaKnown RBP8.7□□□□□ -1.02
PTPDC1-204ENST00000620992 NCOA4Q13772 614 aa8.7□□□□□ -1.02
PTPDC1-204ENST00000620992 BYSLQ13895 437 aaKnown RBP8.7□□□□□ -1.02
PTPDC1-204ENST00000620992 CHADLQ6NUI6 762 aa8.7□□□□□ -1.02
PTPDC1-204ENST00000620992 SLC47A2Q86VL8 602 aa8.7□□□□□ -1.02
PTPDC1-204ENST00000620992 ELMOD1Q8N336 334 aa8.7□□□□□ -1.02
PTPDC1-204ENST00000620992 PRELID2Q8N945 189 aa8.7□□□□□ -1.02
PTPDC1-204ENST00000620992 SLC5A5Q92911 643 aa8.7□□□□□ -1.02
PTPDC1-204ENST00000620992 TTC17Q96AE7 1141 aa8.7□□□□□ -1.02
PTPDC1-204ENST00000620992 HVCN1Q96D96 273 aa8.7□□□□□ -1.02
PTPDC1-204ENST00000620992 ZSWIM1Q9BR11 485 aa8.7□□□□□ -1.02
PTPDC1-204ENST00000620992 OSBPL7Q9BZF2 842 aa8.7□□□□□ -1.02
PTPDC1-204ENST00000620992 NENFQ9UMX5 172 aa8.7□□□□□ -1.02
PTPDC1-204ENST00000620992 PFDN6O15212 129 aa8.69□□□□□ -1.02
PTPDC1-204ENST00000620992 ASMTLO95671 621 aa8.69□□□□□ -1.02
PTPDC1-204ENST00000620992 CALCAP01258 141 aa8.69□□□□□ -1.02
PTPDC1-204ENST00000620992 NNMTP40261 264 aa8.69□□□□□ -1.02
PTPDC1-204ENST00000620992 E2F5Q15329 346 aa8.69□□□□□ -1.02
PTPDC1-204ENST00000620992 SURF1Q15526 300 aa8.69□□□□□ -1.02
PTPDC1-204ENST00000620992 SPRED3Q2MJR0 410 aa8.69□□□□□ -1.02
PTPDC1-204ENST00000620992 FAM133BQ5BKY9 247 aaKnown RBP8.69□□□□□ -1.02
PTPDC1-204ENST00000620992 THEMIS2Q5TEJ8 643 aa8.69□□□□□ -1.02
PTPDC1-204ENST00000620992 IER5Q5VY09 327 aa8.69□□□□□ -1.02
PTPDC1-204ENST00000620992 YTHDF3Q7Z739 585 aaKnown RBP8.69□□□□□ -1.02
PTPDC1-204ENST00000620992 GPD1LQ8N335 351 aa8.69□□□□□ -1.02
PTPDC1-204ENST00000620992 PPM1NQ8N819 430 aa8.69□□□□□ -1.02
PTPDC1-204ENST00000620992 FAM136AQ96C01 138 aa8.69□□□□□ -1.02
PTPDC1-204ENST00000620992 KLHL14Q9P2G3 628 aa8.69□□□□□ -1.02
PTPDC1-204ENST00000620992 STRIP2Q9ULQ0 834 aa8.69□□□□□ -1.02
PTPDC1-204ENST00000620992 NVLO15381 856 aaKnown RBP8.69□□□□□ -1.02
PTPDC1-204ENST00000620992 ZBTB48P10074 688 aaPredicted RBP8.69□□□□□ -1.02
PTPDC1-204ENST00000620992 PDGFRAP16234 1089 aa8.69□□□□□ -1.02
PTPDC1-204ENST00000620992 ACO1P21399 889 aaKnown RBP8.69□□□□□ -1.02
PTPDC1-204ENST00000620992 BEX3Q00994 111 aa8.69□□□□□ -1.02
PTPDC1-204ENST00000620992 POU5F1Q01860 360 aaKnown RBP8.69□□□□□ -1.02
PTPDC1-204ENST00000620992 SNRNP35Q16560 246 aaKnown RBP8.69□□□□□ -1.02
PTPDC1-204ENST00000620992 UBAP2Q5T6F2 1119 aaKnown RBP8.69□□□□□ -1.02
PTPDC1-204ENST00000620992 EMC10Q5UCC4 262 aa8.69□□□□□ -1.02
PTPDC1-204ENST00000620992 PPP1R36Q96LQ0 422 aa8.69□□□□□ -1.02
PTPDC1-204ENST00000620992 ACTR5Q9H9F9 607 aaPredicted RBP8.69□□□□□ -1.02
PTPDC1-204ENST00000620992 NUMA1Q14980 2115 aa8.69□□□□□ -1.02
PTPDC1-204ENST00000620992 MYH11P35749 1972 aa8.69□□□□□ -1.02
PTPDC1-204ENST00000620992 KNTC1P50748 2209 aa8.69□□□□□ -1.02
PTPDC1-204ENST00000620992 DNM1LO00429 736 aa8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms