RNA–Protein interactions for RNA: ENST00000620882.4

LRRC39-204, Transcript of leucine rich repeat containing 39, humanhuman

TSL 5 BASIC

Gene LRRC39, Length 1,951 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC39-204ENST00000620882 PABPC3Q9H361 631 aaKnown RBP4.44□□□□□ -1.7
LRRC39-204ENST00000620882 GCM1Q9NP62 436 aa4.44□□□□□ -1.7
LRRC39-204ENST00000620882 UBN1Q9NPG3 1134 aa4.44□□□□□ -1.7
LRRC39-204ENST00000620882 TM7SF3Q9NS93 570 aa4.44□□□□□ -1.7
LRRC39-204ENST00000620882 KIF17Q9P2E2 1029 aa4.44□□□□□ -1.7
LRRC39-204ENST00000620882 ZMYND8Q9ULU4 1186 aaPredicted RBP4.44□□□□□ -1.7
LRRC39-204ENST00000620882 ATP11BQ9Y2G3 1177 aa4.44□□□□□ -1.7
LRRC39-204ENST00000620882 MBD3L4A6NDZ8 208 aaPredicted RBP4.44□□□□□ -1.7
LRRC39-204ENST00000620882 MBD3L3A6NE82 208 aaPredicted RBP4.44□□□□□ -1.7
LRRC39-204ENST00000620882 HRKO00198 91 aa4.44□□□□□ -1.7
LRRC39-204ENST00000620882 PCDH17O14917 1159 aa4.44□□□□□ -1.7
LRRC39-204ENST00000620882 CHGBP05060 677 aa4.44□□□□□ -1.7
LRRC39-204ENST00000620882 GLI1P08151 1106 aa4.44□□□□□ -1.7
LRRC39-204ENST00000620882 ATP5JP18859 108 aa4.44□□□□□ -1.7
LRRC39-204ENST00000620882 KLRK1P26718 216 aa4.44□□□□□ -1.7
LRRC39-204ENST00000620882 MST1P26927 711 aa4.44□□□□□ -1.7
LRRC39-204ENST00000620882 CASP2P42575 452 aa4.44□□□□□ -1.7
LRRC39-204ENST00000620882 ZIK1Q3SY52 487 aaPredicted RBP4.44□□□□□ -1.7
LRRC39-204ENST00000620882 FAM47AQ5JRC9 791 aa4.44□□□□□ -1.7
LRRC39-204ENST00000620882 UTP14CQ5TAP6 766 aaKnown RBP4.44□□□□□ -1.7
LRRC39-204ENST00000620882 VPS53Q5VIR6 699 aa4.44□□□□□ -1.7
LRRC39-204ENST00000620882 CFAP161Q6P656 301 aa4.44□□□□□ -1.7
LRRC39-204ENST00000620882 SEM1Q6ZVN7 128 aa4.44□□□□□ -1.7
LRRC39-204ENST00000620882 ADGRE4PQ86SQ3 457 aa4.44□□□□□ -1.7
LRRC39-204ENST00000620882 USP37Q86T82 979 aa4.44□□□□□ -1.7
LRRC39-204ENST00000620882 C2CD5Q86YS7 1000 aa4.44□□□□□ -1.7
LRRC39-204ENST00000620882 FTSJ3Q8IY81 847 aaKnown RBP4.44□□□□□ -1.7
LRRC39-204ENST00000620882 HTRA1Q92743 480 aa4.44□□□□□ -1.7
LRRC39-204ENST00000620882 KLHL32Q96NJ5 620 aa4.44□□□□□ -1.7
LRRC39-204ENST00000620882 PRPF18Q99633 342 aaKnown RBP4.44□□□□□ -1.7
LRRC39-204ENST00000620882 PYM1Q9BRP8 204 aaKnown RBP4.44□□□□□ -1.7
LRRC39-204ENST00000620882 TLR10Q9BXR5 811 aa4.44□□□□□ -1.7
LRRC39-204ENST00000620882 PACSIN1Q9BY11 444 aa4.44□□□□□ -1.7
LRRC39-204ENST00000620882 SIRT5Q9NXA8 310 aa4.44□□□□□ -1.7
LRRC39-204ENST00000620882 JKAMPQ9P055 326 aa4.44□□□□□ -1.7
LRRC39-204ENST00000620882 JAG2Q9Y219 1238 aa4.44□□□□□ -1.7
LRRC39-204ENST00000620882 KCNQ3O43525 872 aa4.43□□□□□ -1.7
LRRC39-204ENST00000620882 VPS4BO75351 444 aa4.43□□□□□ -1.7
LRRC39-204ENST00000620882 FAM155BO75949 473 aa4.43□□□□□ -1.7
LRRC39-204ENST00000620882 SASH1O94885 1247 aa4.43□□□□□ -1.7
LRRC39-204ENST00000620882 VSIG10L2P0DP72 767 aa4.43□□□□□ -1.7
LRRC39-204ENST00000620882 MEOX1P50221 254 aa4.43□□□□□ -1.7
LRRC39-204ENST00000620882 COPAP53621 1224 aa4.43□□□□□ -1.7
LRRC39-204ENST00000620882 TARBP2Q15633 366 aaKnown RBP4.43□□□□□ -1.7
LRRC39-204ENST00000620882 NPY5RQ15761 445 aa4.43□□□□□ -1.7
LRRC39-204ENST00000620882 Q6ZUG5 572 aa4.43□□□□□ -1.7
LRRC39-204ENST00000620882 RRAGAQ7L523 313 aa4.43□□□□□ -1.7
LRRC39-204ENST00000620882 RNF169Q8NCN4 708 aa4.43□□□□□ -1.7
LRRC39-204ENST00000620882 NSUN7Q8NE18 718 aaKnown RBP4.43□□□□□ -1.7
LRRC39-204ENST00000620882 FAM46DQ8NEK8 389 aa4.43□□□□□ -1.7
LRRC39-204ENST00000620882 ZNF384Q8TF68 577 aa4.43□□□□□ -1.7
LRRC39-204ENST00000620882 MAELQ96JY0 434 aaKnown RBP4.43□□□□□ -1.7
LRRC39-204ENST00000620882 KCNC2Q96PR1 638 aa4.43□□□□□ -1.7
LRRC39-204ENST00000620882 GSTO2Q9H4Y5 243 aa4.43□□□□□ -1.7
LRRC39-204ENST00000620882 GPR35Q9HC97 309 aa4.43□□□□□ -1.7
LRRC39-204ENST00000620882 HEYLQ9NQ87 328 aaPredicted RBP4.43□□□□□ -1.7
LRRC39-204ENST00000620882 PRDM8Q9NQV8 689 aa4.43□□□□□ -1.7
LRRC39-204ENST00000620882 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP4.43□□□□□ -1.7
LRRC39-204ENST00000620882 MOCS1Q9NZB8 636 aa4.43□□□□□ -1.7
LRRC39-204ENST00000620882 CFAP97Q9P2B7 532 aa4.43□□□□□ -1.7
LRRC39-204ENST00000620882 XPR1Q9UBH6 696 aa4.43□□□□□ -1.7
LRRC39-204ENST00000620882 DCLK1O15075 740 aa4.42□□□□□ -1.7
LRRC39-204ENST00000620882 ANP32CO43423 234 aa4.42□□□□□ -1.7
LRRC39-204ENST00000620882 DNPH1O43598 174 aa4.42□□□□□ -1.7
LRRC39-204ENST00000620882 AGFG2O95081 481 aa4.42□□□□□ -1.7
LRRC39-204ENST00000620882 ARP10275 920 aa4.42□□□□□ -1.7
LRRC39-204ENST00000620882 CHRM3P20309 590 aa4.42□□□□□ -1.7
LRRC39-204ENST00000620882 ATICP31939 592 aa4.42□□□□□ -1.7
LRRC39-204ENST00000620882 CSF2RBP32927 897 aa4.42□□□□□ -1.7
LRRC39-204ENST00000620882 RNF151Q2KHN1 245 aa4.42□□□□□ -1.7
LRRC39-204ENST00000620882 PLA1AQ53H76 456 aa4.42□□□□□ -1.7
LRRC39-204ENST00000620882 SLC45A4Q5BKX6 768 aa4.42□□□□□ -1.7
LRRC39-204ENST00000620882 KRT40Q6A162 431 aa4.42□□□□□ -1.7
LRRC39-204ENST00000620882 PPP1R32Q7Z5V6 425 aa4.42□□□□□ -1.7
LRRC39-204ENST00000620882 ZSWIM9Q86XI8 627 aa4.42□□□□□ -1.7
LRRC39-204ENST00000620882 TMEFF1Q8IYR6 380 aa4.42□□□□□ -1.7
LRRC39-204ENST00000620882 TTLL6Q8N841 843 aa4.42□□□□□ -1.7
LRRC39-204ENST00000620882 PDPRQ8NCN5 879 aa4.42□□□□□ -1.7
LRRC39-204ENST00000620882 CPT1CQ8TCG5 803 aa4.42□□□□□ -1.7
LRRC39-204ENST00000620882 SPPL3Q8TCT6 385 aa4.42□□□□□ -1.7
LRRC39-204ENST00000620882 FNIP1Q8TF40 1166 aa4.42□□□□□ -1.7
LRRC39-204ENST00000620882 SLC7A6OSQ96CW6 309 aaPredicted RBP4.42□□□□□ -1.7
LRRC39-204ENST00000620882 PWWP2AQ96N64 755 aa4.42□□□□□ -1.7
LRRC39-204ENST00000620882 BARD1Q99728 777 aaKnown RBP4.42□□□□□ -1.7
LRRC39-204ENST00000620882 OR10A2Q9H208 303 aa4.42□□□□□ -1.7
LRRC39-204ENST00000620882 WASH6PQ9NQA3 447 aa4.42□□□□□ -1.7
LRRC39-204ENST00000620882 PCMTD2Q9NV79 361 aa4.42□□□□□ -1.7
LRRC39-204ENST00000620882 CLIC5Q9NZA1 410 aa4.42□□□□□ -1.7
LRRC39-204ENST00000620882 B4E171 279 aa4.42□□□□□ -1.7
LRRC39-204ENST00000620882 MATN2O00339 956 aa4.42□□□□□ -1.7
LRRC39-204ENST00000620882 HOXC11O43248 304 aaPredicted RBP4.42□□□□□ -1.7
LRRC39-204ENST00000620882 HAUS5O94927 633 aa4.42□□□□□ -1.7
LRRC39-204ENST00000620882 LMNAP02545 664 aaKnown RBP4.42□□□□□ -1.7
LRRC39-204ENST00000620882 GNAI2P04899 355 aa4.42□□□□□ -1.7
LRRC39-204ENST00000620882 MTHFD1P11586 935 aaKnown RBP4.42□□□□□ -1.7
LRRC39-204ENST00000620882 PFKLP17858 780 aa4.42□□□□□ -1.7
LRRC39-204ENST00000620882 FDXRP22570 491 aa4.42□□□□□ -1.7
LRRC39-204ENST00000620882 ACVR2AP27037 513 aa4.42□□□□□ -1.7
LRRC39-204ENST00000620882 CST5P28325 142 aaPredicted RBP4.42□□□□□ -1.7
LRRC39-204ENST00000620882 TSPAN7P41732 249 aa4.42□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms