RNA–Protein interactions for RNA: ENST00000620854.4

NEDD9-216, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 5 BASIC

Gene NEDD9, Length 4,086 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-216ENST00000620854 C11orf91Q3C1V1 193 aa7.32□□□□□ -1.24
NEDD9-216ENST00000620854 BBS9Q3SYG4 887 aa7.32□□□□□ -1.24
NEDD9-216ENST00000620854 TEX9Q8N6V9 391 aa7.32□□□□□ -1.24
NEDD9-216ENST00000620854 GADD45GIP1Q8TAE8 222 aaPredicted RBP7.32□□□□□ -1.24
NEDD9-216ENST00000620854 C7orf43Q8WVR3 580 aa7.32□□□□□ -1.24
NEDD9-216ENST00000620854 POLR3CQ9BUI4 534 aaPredicted RBP7.32□□□□□ -1.24
NEDD9-216ENST00000620854 SHCBP1LQ9BZQ2 653 aa7.32□□□□□ -1.24
NEDD9-216ENST00000620854 VPS33BQ9H267 617 aa7.32□□□□□ -1.24
NEDD9-216ENST00000620854 DMAC2Q9NW81 257 aa7.32□□□□□ -1.24
NEDD9-216ENST00000620854 STARD13Q9Y3M8 1113 aa7.32□□□□□ -1.24
NEDD9-216ENST00000620854 SYNJ2BP-COX16A0A087WUM0 186 aa7.31□□□□□ -1.24
NEDD9-216ENST00000620854 CCDC195A0A1B0GUA6 201 aa7.31□□□□□ -1.24
NEDD9-216ENST00000620854 H3BRJ5 948 aa7.31□□□□□ -1.24
NEDD9-216ENST00000620854 IPO5O00410 1097 aaKnown RBP7.31□□□□□ -1.24
NEDD9-216ENST00000620854 USP1O94782 785 aa7.31□□□□□ -1.24
NEDD9-216ENST00000620854 ENO1P06733 434 aaKnown RBP7.31□□□□□ -1.24
NEDD9-216ENST00000620854 FDX1P10109 184 aa7.31□□□□□ -1.24
NEDD9-216ENST00000620854 NR1H3Q13133 447 aa7.31□□□□□ -1.24
NEDD9-216ENST00000620854 MOGSQ13724 837 aa7.31□□□□□ -1.24
NEDD9-216ENST00000620854 SNRNP35Q16560 246 aaKnown RBP7.31□□□□□ -1.24
NEDD9-216ENST00000620854 Q4G0T1 1027 aa7.31□□□□□ -1.24
NEDD9-216ENST00000620854 C1orf220Q5T0J3 134 aa7.31□□□□□ -1.24
NEDD9-216ENST00000620854 C9orf131Q5VYM1 1079 aa7.31□□□□□ -1.24
NEDD9-216ENST00000620854 PLA2G4FQ68DD2 849 aa7.31□□□□□ -1.24
NEDD9-216ENST00000620854 SNRNP48Q6IEG0 339 aaKnown RBP7.31□□□□□ -1.24
NEDD9-216ENST00000620854 C3orf62Q6ZUJ4 267 aa7.31□□□□□ -1.24
NEDD9-216ENST00000620854 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP7.31□□□□□ -1.241e-6■□□□□ 8.7
NEDD9-216ENST00000620854 FAM71AQ8IYT1 594 aa7.31□□□□□ -1.24
NEDD9-216ENST00000620854 PTPRN2Q92932 1015 aa7.31□□□□□ -1.24
NEDD9-216ENST00000620854 CAMKK2Q96RR4 588 aa7.31□□□□□ -1.24
NEDD9-216ENST00000620854 IWS1Q96ST2 819 aa7.31□□□□□ -1.24
NEDD9-216ENST00000620854 ZNF395Q9H8N7 513 aaPredicted RBP7.31□□□□□ -1.24
NEDD9-216ENST00000620854 COX16Q9P0S2 106 aa7.31□□□□□ -1.24
NEDD9-216ENST00000620854 MAGED2Q9UNF1 606 aaPredicted RBP7.31□□□□□ -1.24
NEDD9-216ENST00000620854 B2RBV5 119 aa7.31□□□□□ -1.24
NEDD9-216ENST00000620854 SMAPO00193 183 aa7.31□□□□□ -1.24
NEDD9-216ENST00000620854 ATP5HO75947 161 aa7.31□□□□□ -1.24
NEDD9-216ENST00000620854 PYGLP06737 847 aa7.31□□□□□ -1.24
NEDD9-216ENST00000620854 GZMAP12544 262 aa7.31□□□□□ -1.24
NEDD9-216ENST00000620854 AMPD1P23109 780 aa7.31□□□□□ -1.24
NEDD9-216ENST00000620854 VHLP40337 213 aa7.31□□□□□ -1.24
NEDD9-216ENST00000620854 PRELPP51888 382 aa7.31□□□□□ -1.24
NEDD9-216ENST00000620854 ARFIP2P53365 341 aa7.31□□□□□ -1.24
NEDD9-216ENST00000620854 ALCAMQ13740 583 aa7.31□□□□□ -1.24
NEDD9-216ENST00000620854 PTK6Q13882 451 aa7.31□□□□□ -1.24
NEDD9-216ENST00000620854 PARP6Q2NL67 630 aa7.31□□□□□ -1.24
NEDD9-216ENST00000620854 SMTNL2Q2TAL5 461 aa7.31□□□□□ -1.24
NEDD9-216ENST00000620854 ACAD10Q6JQN1 1059 aa7.31□□□□□ -1.24
NEDD9-216ENST00000620854 C10orf82Q8WW14 230 aa7.31□□□□□ -1.24
NEDD9-216ENST00000620854 LPAR1Q92633 364 aa7.31□□□□□ -1.24
NEDD9-216ENST00000620854 RNF146Q9NTX7 359 aa7.31□□□□□ -1.24
NEDD9-216ENST00000620854 GINM1Q9NU53 330 aa7.31□□□□□ -1.24
NEDD9-216ENST00000620854 NOD1Q9Y239 953 aa7.31□□□□□ -1.24
NEDD9-216ENST00000620854 ARAP2Q8WZ64 1704 aa7.31□□□□□ -1.24
NEDD9-216ENST00000620854 STRCQ7RTU9 1775 aa7.31□□□□□ -1.24
NEDD9-216ENST00000620854 IGKV6D-41A0A0C4DH26 115 aa7.31□□□□□ -1.24
NEDD9-216ENST00000620854 H7C0C1 242 aa7.31□□□□□ -1.24
NEDD9-216ENST00000620854 TLR3O15455 904 aaKnown RBP7.31□□□□□ -1.24
NEDD9-216ENST00000620854 STK10O94804 968 aaKnown RBP7.31□□□□□ -1.24
NEDD9-216ENST00000620854 FESP07332 822 aa7.31□□□□□ -1.24
NEDD9-216ENST00000620854 PGM1P36871 562 aa7.31□□□□□ -1.24
NEDD9-216ENST00000620854 ATP5OP48047 213 aa7.31□□□□□ -1.24
NEDD9-216ENST00000620854 RPL7AP62424 266 aaKnown RBP7.31□□□□□ -1.24
NEDD9-216ENST00000620854 LAMB3Q13751 1172 aa7.31□□□□□ -1.24
NEDD9-216ENST00000620854 PDK4Q16654 411 aa7.31□□□□□ -1.24
NEDD9-216ENST00000620854 RINLQ6ZS11 566 aa7.31□□□□□ -1.24
NEDD9-216ENST00000620854 RHPN2Q8IUC4 686 aa7.31□□□□□ -1.24
NEDD9-216ENST00000620854 FBXO27Q8NI29 283 aa7.31□□□□□ -1.24
NEDD9-216ENST00000620854 PYROXD1Q8WU10 500 aa7.31□□□□□ -1.24
NEDD9-216ENST00000620854 FAM111AQ96PZ2 611 aa7.31□□□□□ -1.24
NEDD9-216ENST00000620854 THTPAQ9BU02 230 aa7.31□□□□□ -1.24
NEDD9-216ENST00000620854 SPC25Q9HBM1 224 aa7.31□□□□□ -1.24
NEDD9-216ENST00000620854 UVRAGQ9P2Y5 699 aa7.31□□□□□ -1.24
NEDD9-216ENST00000620854 FBXO40Q9UH90 709 aa7.31□□□□□ -1.24
NEDD9-216ENST00000620854 PCDHB4Q9Y5E5 795 aa7.31□□□□□ -1.24
NEDD9-216ENST00000620854 ANKRD36CQ5JPF3 1778 aa7.3□□□□□ -1.24
NEDD9-216ENST00000620854 FAM237BA0A1B0GVD1 139 aa7.3□□□□□ -1.24
NEDD9-216ENST00000620854 TBX3O15119 743 aa7.3□□□□□ -1.24
NEDD9-216ENST00000620854 GSC2O15499 205 aa7.3□□□□□ -1.24
NEDD9-216ENST00000620854 AHCYL1O43865 530 aa7.3□□□□□ -1.24
NEDD9-216ENST00000620854 CCDC22O60826 627 aa7.3□□□□□ -1.24
NEDD9-216ENST00000620854 CYP1A2P05177 515 aa7.3□□□□□ -1.24
NEDD9-216ENST00000620854 GCAP28676 217 aa7.3□□□□□ -1.24
NEDD9-216ENST00000620854 SKIV2L2P42285 1042 aaKnown RBP7.3□□□□□ -1.24
NEDD9-216ENST00000620854 JAG1P78504 1218 aa7.3□□□□□ -1.24
NEDD9-216ENST00000620854 DMP1Q13316 513 aaPredicted RBP7.3□□□□□ -1.24
NEDD9-216ENST00000620854 CEP55Q53EZ4 464 aa7.3□□□□□ -1.24
NEDD9-216ENST00000620854 KCNT1Q5JUK3 1230 aa7.3□□□□□ -1.24
NEDD9-216ENST00000620854 CWF19L1Q69YN2 538 aaKnown RBP7.3□□□□□ -1.24
NEDD9-216ENST00000620854 NXNQ6DKJ4 435 aa7.3□□□□□ -1.24
NEDD9-216ENST00000620854 LRRC74BQ6ZQY2 392 aa7.3□□□□□ -1.24
NEDD9-216ENST00000620854 ALYREFQ86V81 257 aaKnown RBP7.3□□□□□ -1.24
NEDD9-216ENST00000620854 SIAH1Q8IUQ4 282 aa7.3□□□□□ -1.24
NEDD9-216ENST00000620854 DCLK2Q8N568 766 aa7.3□□□□□ -1.24
NEDD9-216ENST00000620854 ZNF333Q96JL9 665 aa7.3□□□□□ -1.24
NEDD9-216ENST00000620854 RMDN3Q96TC7 470 aa7.3□□□□□ -1.24
NEDD9-216ENST00000620854 FAM213AQ9BRX8 229 aa7.3□□□□□ -1.24
NEDD9-216ENST00000620854 SLC13A1Q9BZW2 595 aa7.3□□□□□ -1.24
NEDD9-216ENST00000620854 RPAP3Q9H6T3 665 aaPredicted RBP7.3□□□□□ -1.24
NEDD9-216ENST00000620854 SMYD3Q9H7B4 428 aa7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms