RNA–Protein interactions for RNA: ENST00000620787.4

PDLIM3-212, Transcript of PDZ and LIM domain 3, humanhuman

TSL 4 BASIC

Gene PDLIM3, Length 2,352 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-212ENST00000620787 SYT15Q9BQS2 421 aa20.62■□□□□ 0.89
PDLIM3-212ENST00000620787 PARVAQ9NVD7 372 aa20.62■□□□□ 0.89
PDLIM3-212ENST00000620787 ARL8BQ9NVJ2 186 aa20.62■□□□□ 0.89
PDLIM3-212ENST00000620787 NMRK1Q9NWW6 199 aa20.62■□□□□ 0.89
PDLIM3-212ENST00000620787 IVNS1ABPQ9Y6Y0 642 aa20.62■□□□□ 0.89
PDLIM3-212ENST00000620787 SPDYE5A6NIY4 337 aa20.61■□□□□ 0.89
PDLIM3-212ENST00000620787 SIGLEC16A6NMB1 481 aa20.61■□□□□ 0.89
PDLIM3-212ENST00000620787 TCP10L2B9ZVM9 353 aa20.61■□□□□ 0.89
PDLIM3-212ENST00000620787 ATP2A1O14983 1001 aa20.61■□□□□ 0.89
PDLIM3-212ENST00000620787 VNN1O95497 513 aa20.61■□□□□ 0.89
PDLIM3-212ENST00000620787 C4BPAP04003 597 aaKnown RBP20.61■□□□□ 0.89
PDLIM3-212ENST00000620787 PIK3CAP42336 1068 aa20.61■□□□□ 0.89
PDLIM3-212ENST00000620787 JAK3P52333 1124 aa20.61■□□□□ 0.89
PDLIM3-212ENST00000620787 ZC3H12AQ5D1E8 599 aaKnown RBP20.61■□□□□ 0.89
PDLIM3-212ENST00000620787 ZFYVE27Q5T4F4 411 aa20.61■□□□□ 0.89
PDLIM3-212ENST00000620787 TAS1R3Q7RTX0 852 aa20.61■□□□□ 0.89
PDLIM3-212ENST00000620787 SPDYE1Q8NFV5 336 aaPredicted RBP20.61■□□□□ 0.89
PDLIM3-212ENST00000620787 FAM136AQ96C01 138 aa20.61■□□□□ 0.89
PDLIM3-212ENST00000620787 HAUS1Q96CS2 278 aa20.61■□□□□ 0.89
PDLIM3-212ENST00000620787 GLIS2Q9BZE0 524 aaPredicted RBP20.61■□□□□ 0.89
PDLIM3-212ENST00000620787 APOBEC3GQ9HC16 384 aaKnown RBP20.61■□□□□ 0.89
PDLIM3-212ENST00000620787 PCDH9Q9HC56 1237 aa20.61■□□□□ 0.89
PDLIM3-212ENST00000620787 FETUBQ9UGM5 382 aa20.61■□□□□ 0.89
PDLIM3-212ENST00000620787 PCDHB4Q9Y5E5 795 aa20.61■□□□□ 0.89
PDLIM3-212ENST00000620787 WDR64B1ANS9 1081 aa20.61■□□□□ 0.89
PDLIM3-212ENST00000620787 GOLGA8SH3BPF8 625 aa20.61■□□□□ 0.89
PDLIM3-212ENST00000620787 GOLGA8MH3BSY2 632 aa20.61■□□□□ 0.89
PDLIM3-212ENST00000620787 NVLO15381 856 aaKnown RBP20.61■□□□□ 0.89
PDLIM3-212ENST00000620787 ITGAVP06756 1048 aa20.61■□□□□ 0.89
PDLIM3-212ENST00000620787 CAP2P40123 477 aa20.61■□□□□ 0.89
PDLIM3-212ENST00000620787 GAD2Q05329 585 aa20.61■□□□□ 0.89
PDLIM3-212ENST00000620787 KLC1Q07866 573 aa20.61■□□□□ 0.89
PDLIM3-212ENST00000620787 CUL2Q13617 745 aa20.61■□□□□ 0.89
PDLIM3-212ENST00000620787 TFDP1Q14186 410 aa20.61■□□□□ 0.89
PDLIM3-212ENST00000620787 MUM1Q2TAK8 710 aa20.61■□□□□ 0.89
PDLIM3-212ENST00000620787 TMEM270Q6UE05 265 aa20.61■□□□□ 0.89
PDLIM3-212ENST00000620787 NKD2Q969F2 451 aaPredicted RBP20.61■□□□□ 0.89
PDLIM3-212ENST00000620787 TMEM121Q9BTD3 319 aa20.61■□□□□ 0.89
PDLIM3-212ENST00000620787 DHRS4Q9BTZ2 278 aa20.61■□□□□ 0.89
PDLIM3-212ENST00000620787 C12orf65Q9H3J6 166 aaKnown RBP20.61■□□□□ 0.89
PDLIM3-212ENST00000620787 FARP1Q9Y4F1 1045 aaPredicted RBP20.61■□□□□ 0.89
PDLIM3-212ENST00000620787 PTPRJQ12913 1337 aa20.61■□□□□ 0.89
PDLIM3-212ENST00000620787 hCG_1818297A0A087WSY0 165 aa20.6■□□□□ 0.89
PDLIM3-212ENST00000620787 LRRD1A4D1F6 860 aa20.6■□□□□ 0.89
PDLIM3-212ENST00000620787 CCDC22O60826 627 aa20.6■□□□□ 0.89
PDLIM3-212ENST00000620787 NPTXRO95502 500 aa20.6■□□□□ 0.89
PDLIM3-212ENST00000620787 FESP07332 822 aa20.6■□□□□ 0.89
PDLIM3-212ENST00000620787 PSMD6Q15008 389 aa20.6■□□□□ 0.89
PDLIM3-212ENST00000620787 HIF1AQ16665 826 aa20.6■□□□□ 0.89
PDLIM3-212ENST00000620787 ADGRD1Q6QNK2 874 aa20.6■□□□□ 0.89
PDLIM3-212ENST00000620787 TCP10LQ8TDR4 215 aa20.6■□□□□ 0.89
PDLIM3-212ENST00000620787 MASTLQ96GX5 879 aa20.6■□□□□ 0.89
PDLIM3-212ENST00000620787 BTBD10Q9BSF8 475 aa20.6■□□□□ 0.89
PDLIM3-212ENST00000620787 STOML1Q9UBI4 398 aa20.6■□□□□ 0.89
PDLIM3-212ENST00000620787 USP21Q9UK80 565 aa20.6■□□□□ 0.89
PDLIM3-212ENST00000620787 TMEM191CA6NGB0 347 aa20.6■□□□□ 0.89
PDLIM3-212ENST00000620787 MAP3K13O43283 966 aa20.6■□□□□ 0.89
PDLIM3-212ENST00000620787 HAUS5O94927 633 aa20.6■□□□□ 0.89
PDLIM3-212ENST00000620787 TMEM191BP0C7N4 346 aa20.6■□□□□ 0.89
PDLIM3-212ENST00000620787 EIF2AK2P19525 551 aaKnown RBP20.6■□□□□ 0.89
PDLIM3-212ENST00000620787 SSTR1P30872 391 aa20.6■□□□□ 0.89
PDLIM3-212ENST00000620787 PTPN7P35236 360 aa20.6■□□□□ 0.89
PDLIM3-212ENST00000620787 VHLP40337 213 aa20.6■□□□□ 0.89
PDLIM3-212ENST00000620787 TXNRD3NBQ6F5E7 133 aa20.6■□□□□ 0.89
PDLIM3-212ENST00000620787 APBB1IPQ7Z5R6 666 aaPredicted RBP20.6■□□□□ 0.89
PDLIM3-212ENST00000620787 SYTL5Q8TDW5 730 aaPredicted RBP20.6■□□□□ 0.89
PDLIM3-212ENST00000620787 BICD1Q96G01 975 aa20.6■□□□□ 0.89
PDLIM3-212ENST00000620787 PAFAH2Q99487 392 aa20.6■□□□□ 0.89
PDLIM3-212ENST00000620787 WDR83Q9BRX9 315 aaKnown RBP20.6■□□□□ 0.89
PDLIM3-212ENST00000620787 SLC17A7Q9P2U7 560 aa20.6■□□□□ 0.89
PDLIM3-212ENST00000620787 SGK1O00141 431 aa20.59■□□□□ 0.89
PDLIM3-212ENST00000620787 TM9SF1O15321 606 aa20.59■□□□□ 0.89
PDLIM3-212ENST00000620787 AHCYL1O43865 530 aa20.59■□□□□ 0.89
PDLIM3-212ENST00000620787 EXTL3O43909 919 aa20.59■□□□□ 0.89
PDLIM3-212ENST00000620787 PIAS1O75925 651 aa20.59■□□□□ 0.89
PDLIM3-212ENST00000620787 TNNI1P19237 187 aa20.59■□□□□ 0.89
PDLIM3-212ENST00000620787 SFNP31947 248 aa20.59■□□□□ 0.89
PDLIM3-212ENST00000620787 GHRHRQ02643 423 aa20.59■□□□□ 0.89
PDLIM3-212ENST00000620787 MSS51Q4VC12 460 aa20.59■□□□□ 0.89
PDLIM3-212ENST00000620787 LRRC38Q5VT99 294 aa20.59■□□□□ 0.89
PDLIM3-212ENST00000620787 BANPQ8N9N5 519 aa20.59■□□□□ 0.89
PDLIM3-212ENST00000620787 PTPRN2Q92932 1015 aa20.59■□□□□ 0.89
PDLIM3-212ENST00000620787 ACSF2Q96CM8 615 aaPredicted RBP20.59■□□□□ 0.89
PDLIM3-212ENST00000620787 C17orf75Q9HAS0 396 aa20.59■□□□□ 0.89
PDLIM3-212ENST00000620787 HEY2Q9UBP5 337 aa20.59■□□□□ 0.89
PDLIM3-212ENST00000620787 NDC80O14777 642 aa20.59■□□□□ 0.89
PDLIM3-212ENST00000620787 PLSCR1O15162 318 aa20.59■□□□□ 0.89
PDLIM3-212ENST00000620787 GSC2O15499 205 aa20.59■□□□□ 0.89
PDLIM3-212ENST00000620787 IFNB1P01574 187 aa20.59■□□□□ 0.89
PDLIM3-212ENST00000620787 SESN3P58005 492 aa20.59■□□□□ 0.89
PDLIM3-212ENST00000620787 MXRA7P84157 204 aa20.59■□□□□ 0.89
PDLIM3-212ENST00000620787 RCN1Q15293 331 aa20.59■□□□□ 0.89
PDLIM3-212ENST00000620787 FNBP1LQ5T0N5 605 aa20.59■□□□□ 0.89
PDLIM3-212ENST00000620787 ANKRD22Q5VYY1 191 aa20.59■□□□□ 0.89
PDLIM3-212ENST00000620787 TMEM154Q6P9G4 183 aa20.59■□□□□ 0.89
PDLIM3-212ENST00000620787 APLFQ8IW19 511 aaPredicted RBP20.59■□□□□ 0.89
PDLIM3-212ENST00000620787 NRG4Q8WWG1 115 aa20.59■□□□□ 0.89
PDLIM3-212ENST00000620787 TAAR1Q96RJ0 339 aa20.59■□□□□ 0.89
PDLIM3-212ENST00000620787 VPS11Q9H270 941 aa20.59■□□□□ 0.89
PDLIM3-212ENST00000620787 ACSS3Q9H6R3 686 aa20.59■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms