RNA–Protein interactions for RNA: ENST00000620463.1

COL1A2-213, Transcript of collagen type I alpha 2 chain, humanhuman

TSL 5 BASIC

Gene COL1A2, Length 4,523 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A2-213ENST00000620463 DNAJC16Q9Y2G8 782 aa13.71□□□□□ -0.21
COL1A2-213ENST00000620463 MATN2O00339 956 aa13.71□□□□□ -0.22
COL1A2-213ENST00000620463 DDX3XO00571 662 aaKnown RBP eCLIP13.71□□□□□ -0.22
COL1A2-213ENST00000620463 ADRA1DP25100 572 aa13.71□□□□□ -0.22
COL1A2-213ENST00000620463 SERPINB9P50453 376 aa13.71□□□□□ -0.22
COL1A2-213ENST00000620463 CDK7P50613 346 aa13.71□□□□□ -0.22
COL1A2-213ENST00000620463 NPEPPSP55786 919 aa13.71□□□□□ -0.22
COL1A2-213ENST00000620463 SERBP1Q8NC51 408 aaKnown RBP eCLIP13.71□□□□□ -0.22
COL1A2-213ENST00000620463 TNIP2Q8NFZ5 429 aa13.71□□□□□ -0.22
COL1A2-213ENST00000620463 DIS3LQ8TF46 1054 aaKnown RBP13.71□□□□□ -0.22
COL1A2-213ENST00000620463 EXOSC4Q9NPD3 245 aaKnown RBP13.71□□□□□ -0.22
COL1A2-213ENST00000620463 TIMMDC1Q9NPL8 285 aa13.71□□□□□ -0.22
COL1A2-213ENST00000620463 DDX56Q9NY93 547 aaKnown RBP13.71□□□□□ -0.22
COL1A2-213ENST00000620463 OVOS2A0A0G2JMS6 1433 aa13.71□□□□□ -0.22
COL1A2-213ENST00000620463 ABCB11O95342 1321 aa13.71□□□□□ -0.22
COL1A2-213ENST00000620463 SPAG6O75602 509 aa13.71□□□□□ -0.22
COL1A2-213ENST00000620463 JAK1P23458 1154 aa13.71□□□□□ -0.22
COL1A2-213ENST00000620463 ORC2Q13416 577 aaPredicted RBP13.71□□□□□ -0.22
COL1A2-213ENST00000620463 PKN2Q16513 984 aaKnown RBP13.71□□□□□ -0.22
COL1A2-213ENST00000620463 PDXDC2PQ6P474 469 aa13.71□□□□□ -0.22
COL1A2-213ENST00000620463 EXOC3L1Q86VI1 746 aa13.71□□□□□ -0.22
COL1A2-213ENST00000620463 PCYOX1LQ8NBM8 494 aa13.71□□□□□ -0.22
COL1A2-213ENST00000620463 UCMAQ8WVF2 138 aa13.71□□□□□ -0.22
COL1A2-213ENST00000620463 ZNF570Q96NI8 536 aa13.71□□□□□ -0.22
COL1A2-213ENST00000620463 TRIM39Q9HCM9 518 aa13.71□□□□□ -0.22
COL1A2-213ENST00000620463 HMG20AQ9NP66 347 aa13.71□□□□□ -0.22
COL1A2-213ENST00000620463 COPG2Q9UBF2 871 aa13.71□□□□□ -0.22
COL1A2-213ENST00000620463 TBKBP1A7MCY6 615 aa13.7□□□□□ -0.22
COL1A2-213ENST00000620463 TSC22D2O75157 780 aa13.7□□□□□ -0.22
COL1A2-213ENST00000620463 GSNP06396 782 aa13.7□□□□□ -0.22
COL1A2-213ENST00000620463 CYP2D6P10635 497 aa13.7□□□□□ -0.22
COL1A2-213ENST00000620463 PEX3P56589 373 aa13.7□□□□□ -0.22
COL1A2-213ENST00000620463 SESN2P58004 480 aaPredicted RBP13.7□□□□□ -0.22
COL1A2-213ENST00000620463 RAB14P61106 215 aa13.7□□□□□ -0.22
COL1A2-213ENST00000620463 CDH24Q86UP0 819 aa13.7□□□□□ -0.22
COL1A2-213ENST00000620463 RCOR2Q8IZ40 523 aa13.7□□□□□ -0.22
COL1A2-213ENST00000620463 RNF148Q8N7C7 305 aa13.7□□□□□ -0.22
COL1A2-213ENST00000620463 PLEKHG4BQ96PX9 1271 aa13.7□□□□□ -0.22
COL1A2-213ENST00000620463 EFCAB1Q9HAE3 211 aa13.7□□□□□ -0.22
COL1A2-213ENST00000620463 SLC24A2Q9UI40 661 aa13.7□□□□□ -0.22
COL1A2-213ENST00000620463 CARD8Q9Y2G2 431 aa13.7□□□□□ -0.22
COL1A2-213ENST00000620463 WDR37Q9Y2I8 494 aa13.7□□□□□ -0.22
COL1A2-213ENST00000620463 NCAPD2Q15021 1401 aa13.7□□□□□ -0.22
COL1A2-213ENST00000620463 INO80Q9ULG1 1556 aaPredicted RBP13.7□□□□□ -0.22
COL1A2-213ENST00000620463 DCDC2CA8MYV0 355 aa13.7□□□□□ -0.22
COL1A2-213ENST00000620463 SNAP23O00161 211 aa13.7□□□□□ -0.22
COL1A2-213ENST00000620463 TM9SF1O15321 606 aa13.7□□□□□ -0.22
COL1A2-213ENST00000620463 PROCP04070 461 aa13.7□□□□□ -0.22
COL1A2-213ENST00000620463 SSTR3P32745 418 aaPredicted RBP13.7□□□□□ -0.22
COL1A2-213ENST00000620463 TFAMQ00059 246 aaKnown RBP13.7□□□□□ -0.22
COL1A2-213ENST00000620463 ALCAMQ13740 583 aa13.7□□□□□ -0.22
COL1A2-213ENST00000620463 KCTD19Q17RG1 926 aaPredicted RBP13.7□□□□□ -0.22
COL1A2-213ENST00000620463 TMEM110Q86TL2 294 aa13.7□□□□□ -0.22
COL1A2-213ENST00000620463 CCDC60Q8IWA6 550 aaPredicted RBP13.7□□□□□ -0.22
COL1A2-213ENST00000620463 ASAP3Q8TDY4 903 aa13.7□□□□□ -0.22
COL1A2-213ENST00000620463 GCOM2Q9BZD3 368 aaPredicted RBP13.7□□□□□ -0.22
COL1A2-213ENST00000620463 QTRT2Q9H974 415 aaKnown RBP13.7□□□□□ -0.22
COL1A2-213ENST00000620463 IL1RL2Q9HB29 575 aa13.7□□□□□ -0.22
COL1A2-213ENST00000620463 SLC38A10Q9HBR0 1119 aa13.7□□□□□ -0.22
COL1A2-213ENST00000620463 GOLGA8TH3BQL2 631 aa13.7□□□□□ -0.22
COL1A2-213ENST00000620463 MED7O43513 233 aa13.7□□□□□ -0.22
COL1A2-213ENST00000620463 ITGA2BP08514 1039 aa13.7□□□□□ -0.22
COL1A2-213ENST00000620463 STAT3P40763 770 aa13.7□□□□□ -0.22
COL1A2-213ENST00000620463 RUNX1T1Q06455 604 aa13.7□□□□□ -0.22
COL1A2-213ENST00000620463 CNPY1Q3B7I2 92 aa13.7□□□□□ -0.22
COL1A2-213ENST00000620463 VPS50Q96JG6 964 aa13.7□□□□□ -0.22
COL1A2-213ENST00000620463 RIOK1Q9BRS2 568 aaKnown RBP13.7□□□□□ -0.22
COL1A2-213ENST00000620463 DENND2DQ9H6A0 471 aaPredicted RBP13.7□□□□□ -0.22
COL1A2-213ENST00000620463 COPS7BQ9H9Q2 264 aaPredicted RBP13.7□□□□□ -0.22
COL1A2-213ENST00000620463 TDRKHQ9Y2W6 561 aaKnown RBP13.7□□□□□ -0.22
COL1A2-213ENST00000620463 ZHX2Q9Y6X8 837 aa13.7□□□□□ -0.22
COL1A2-213ENST00000620463 NUDT17P0C025 328 aa13.69□□□□□ -0.22
COL1A2-213ENST00000620463 TFE3P19532 575 aaPredicted RBP13.69□□□□□ -0.22
COL1A2-213ENST00000620463 BTDP43251 543 aa13.69□□□□□ -0.22
COL1A2-213ENST00000620463 RRP1BQ14684 758 aaKnown RBP13.69□□□□□ -0.22
COL1A2-213ENST00000620463 MFSD14BQ5SR56 506 aa13.69□□□□□ -0.22
COL1A2-213ENST00000620463 FAM182BQ5T319 152 aa13.69□□□□□ -0.22
COL1A2-213ENST00000620463 SLC10A4Q96EP9 437 aa13.69□□□□□ -0.22
COL1A2-213ENST00000620463 SEMA6BQ9H3T3 888 aa13.69□□□□□ -0.22
COL1A2-213ENST00000620463 NINJ2Q9NZG7 142 aa13.69□□□□□ -0.22
COL1A2-213ENST00000620463 DMTF1Q9Y222 760 aa13.69□□□□□ -0.22
COL1A2-213ENST00000620463 CDYLQ9Y232 598 aa13.69□□□□□ -0.22
COL1A2-213ENST00000620463 HEG1Q9ULI3 1381 aa13.69□□□□□ -0.22
COL1A2-213ENST00000620463 SAC3D1A6NKF1 404 aa13.69□□□□□ -0.22
COL1A2-213ENST00000620463 E9PBE3 544 aa13.69□□□□□ -0.22
COL1A2-213ENST00000620463 SLC16A3O15427 465 aaKnown RBP13.69□□□□□ -0.22
COL1A2-213ENST00000620463 KLHL41O60662 606 aa13.69□□□□□ -0.22
COL1A2-213ENST00000620463 CNOT3O75175 753 aaKnown RBP13.69□□□□□ -0.22
COL1A2-213ENST00000620463 NMT1P30419 496 aaKnown RBP13.69□□□□□ -0.22
COL1A2-213ENST00000620463 GNA15P30679 374 aa13.69□□□□□ -0.22
COL1A2-213ENST00000620463 MAGEA8P43361 318 aa13.69□□□□□ -0.22
COL1A2-213ENST00000620463 CAPRIN1Q14444 709 aaKnown RBP13.69□□□□□ -0.22
COL1A2-213ENST00000620463 RNF19BQ6ZMZ0 732 aa13.69□□□□□ -0.22
COL1A2-213ENST00000620463 NET1Q7Z628 596 aaPredicted RBP13.69□□□□□ -0.22
COL1A2-213ENST00000620463 SH3TC2Q8TF17 1288 aa13.69□□□□□ -0.22
COL1A2-213ENST00000620463 CPA5Q8WXQ8 436 aa13.69□□□□□ -0.22
COL1A2-213ENST00000620463 USP13Q92995 863 aaPredicted RBP13.69□□□□□ -0.22
COL1A2-213ENST00000620463 DNAJC1Q96KC8 554 aaKnown RBP13.69□□□□□ -0.22
COL1A2-213ENST00000620463 ZBTB18Q99592 522 aa13.69□□□□□ -0.22
COL1A2-213ENST00000620463 TMEM47Q9BQJ4 181 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms