RNA–Protein interactions for RNA: ENST00000620429.4

VPS11-207, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 5 BASIC

Gene VPS11, Length 2,739 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-207ENST00000620429 DOK7Q18PE1 504 aa10.89□□□□□ -0.67
VPS11-207ENST00000620429 ALKBH5Q6P6C2 394 aaKnown RBP10.89□□□□□ -0.67
VPS11-207ENST00000620429 AAGABQ6PD74 315 aa10.89□□□□□ -0.67
VPS11-207ENST00000620429 DCDC5Q6ZRR9 648 aa10.89□□□□□ -0.67
VPS11-207ENST00000620429 RAPH1Q70E73 1250 aa10.89□□□□□ -0.67
VPS11-207ENST00000620429 EME1Q96AY2 570 aa10.89□□□□□ -0.67
VPS11-207ENST00000620429 SPZ1Q9BXG8 430 aa10.89□□□□□ -0.67
VPS11-207ENST00000620429 FGFBP2Q9BYJ0 223 aa10.89□□□□□ -0.67
VPS11-207ENST00000620429 C17orf75Q9HAS0 396 aa10.89□□□□□ -0.67
VPS11-207ENST00000620429 ARL8BQ9NVJ2 186 aa10.89□□□□□ -0.67
VPS11-207ENST00000620429 DOLKQ9UPQ8 538 aa10.89□□□□□ -0.67
VPS11-207ENST00000620429 TTC34A8MYJ7 566 aa10.89□□□□□ -0.67
VPS11-207ENST00000620429 PPEF1O14829 653 aaPredicted RBP10.89□□□□□ -0.67
VPS11-207ENST00000620429 BAIAP3O94812 1187 aa10.89□□□□□ -0.67
VPS11-207ENST00000620429 HAUS5O94927 633 aa10.89□□□□□ -0.67
VPS11-207ENST00000620429 MMP10P09238 476 aa10.89□□□□□ -0.67
VPS11-207ENST00000620429 NAT2P11245 290 aa10.89□□□□□ -0.67
VPS11-207ENST00000620429 KCNA2P16389 499 aa10.89□□□□□ -0.67
VPS11-207ENST00000620429 CDH2P19022 906 aaPredicted RBP10.89□□□□□ -0.67
VPS11-207ENST00000620429 RPL21P46778 160 aaKnown RBP10.89□□□□□ -0.67
VPS11-207ENST00000620429 SLC18A1P54219 525 aa10.89□□□□□ -0.67
VPS11-207ENST00000620429 CNGA3Q16281 694 aa10.89□□□□□ -0.67
VPS11-207ENST00000620429 USP41Q3LFD5 358 aa10.89□□□□□ -0.67
VPS11-207ENST00000620429 SFT2D3Q587I9 215 aa10.89□□□□□ -0.67
VPS11-207ENST00000620429 NIPAL1Q6NVV3 410 aa10.89□□□□□ -0.67
VPS11-207ENST00000620429 FOXR2Q6PJQ5 311 aa10.89□□□□□ -0.67
VPS11-207ENST00000620429 USP17L2Q6R6M4 530 aa10.89□□□□□ -0.67
VPS11-207ENST00000620429 NT5DC3Q86UY8 548 aa10.89□□□□□ -0.67
VPS11-207ENST00000620429 CLEC10AQ8IUN9 316 aa10.89□□□□□ -0.67
VPS11-207ENST00000620429 MARVELD2Q8N4S9 558 aa10.89□□□□□ -0.67
VPS11-207ENST00000620429 DNAJC19Q96DA6 116 aa10.89□□□□□ -0.67
VPS11-207ENST00000620429 PIGSQ96S52 555 aa10.89□□□□□ -0.67
VPS11-207ENST00000620429 UNKQ9C0B0 810 aaKnown RBP10.89□□□□□ -0.67
VPS11-207ENST00000620429 TBC1D23Q9NUY8 699 aa10.89□□□□□ -0.67
VPS11-207ENST00000620429 NAGPAQ9UK23 515 aa10.89□□□□□ -0.67
VPS11-207ENST00000620429 PCDHA3Q9Y5H8 950 aa10.89□□□□□ -0.67
VPS11-207ENST00000620429 CEPT1Q9Y6K0 416 aa10.89□□□□□ -0.67
VPS11-207ENST00000620429 SEC23IPQ9Y6Y8 1000 aaKnown RBP10.89□□□□□ -0.67
VPS11-207ENST00000620429 ROBO3Q96MS0 1386 aa10.89□□□□□ -0.67
VPS11-207ENST00000620429 SNED1Q8TER0 1413 aa10.88□□□□□ -0.67
VPS11-207ENST00000620429 A0A0A6YYK5 440 aaPredicted RBP10.88□□□□□ -0.67
VPS11-207ENST00000620429 FAM47DPA6NHR8 397 aa10.88□□□□□ -0.67
VPS11-207ENST00000620429 PIK3CDO00329 1044 aa10.88□□□□□ -0.67
VPS11-207ENST00000620429 DNAJC6O75061 913 aa10.88□□□□□ -0.67
VPS11-207ENST00000620429 PARNO95453 639 aaKnown RBP10.88□□□□□ -0.67
VPS11-207ENST00000620429 OCM2P0CE71 109 aa10.88□□□□□ -0.67
VPS11-207ENST00000620429 OCMP0CE72 109 aaPredicted RBP10.88□□□□□ -0.67
VPS11-207ENST00000620429 RARBP10826 455 aa10.88□□□□□ -0.67
VPS11-207ENST00000620429 PABPC1P11940 636 aaKnown RBP10.88□□□□□ -0.67
VPS11-207ENST00000620429 PGM1P36871 562 aa10.88□□□□□ -0.67
VPS11-207ENST00000620429 EIF2B2P49770 351 aaKnown RBP10.88□□□□□ -0.67
VPS11-207ENST00000620429 NPEPPSP55786 919 aa10.88□□□□□ -0.67
VPS11-207ENST00000620429 KCNH2Q12809 1159 aa10.88□□□□□ -0.67
VPS11-207ENST00000620429 PDAP1Q13442 181 aaKnown RBP10.88□□□□□ -0.67
VPS11-207ENST00000620429 CYTH1Q15438 398 aa10.88□□□□□ -0.67
VPS11-207ENST00000620429 MMEL1Q495T6 779 aa10.88□□□□□ -0.67
VPS11-207ENST00000620429 KCTD21Q4G0X4 260 aa10.88□□□□□ -0.67
VPS11-207ENST00000620429 C6orf163Q5TEZ5 329 aa10.88□□□□□ -0.67
VPS11-207ENST00000620429 SPOPLQ6IQ16 392 aa10.88□□□□□ -0.67
VPS11-207ENST00000620429 ELMSAN1Q6PJG2 1045 aa10.88□□□□□ -0.67
VPS11-207ENST00000620429 POTEHQ6S545 545 aa10.88□□□□□ -0.67
VPS11-207ENST00000620429 IRF2BP2Q7Z5L9 587 aa10.88□□□□□ -0.67
VPS11-207ENST00000620429 ANKRD35Q8N283 1001 aa10.88□□□□□ -0.67
VPS11-207ENST00000620429 CERS5Q8N5B7 392 aa10.88□□□□□ -0.67
VPS11-207ENST00000620429 FAM172AQ8WUF8 416 aa10.88□□□□□ -0.67
VPS11-207ENST00000620429 GLG1Q92896 1179 aa10.88□□□□□ -0.67
VPS11-207ENST00000620429 ART4Q93070 314 aa10.88□□□□□ -0.67
VPS11-207ENST00000620429 SGF29Q96ES7 293 aa10.88□□□□□ -0.67
VPS11-207ENST00000620429 PHF12Q96QT6 1004 aa10.88□□□□□ -0.67
VPS11-207ENST00000620429 EYA3Q99504 573 aa10.88□□□□□ -0.67
VPS11-207ENST00000620429 CCDC68Q9H2F9 335 aa10.88□□□□□ -0.67
VPS11-207ENST00000620429 VTA1Q9NP79 307 aa10.88□□□□□ -0.67
VPS11-207ENST00000620429 BMP2KQ9NSY1 1161 aaPredicted RBP10.88□□□□□ -0.67
VPS11-207ENST00000620429 DICER1Q9UPY3 1922 aaKnown RBP10.88□□□□□ -0.67
VPS11-207ENST00000620429 TMEM114B3SHH9 223 aa10.88□□□□□ -0.67
VPS11-207ENST00000620429 ADCY6O43306 1168 aa10.88□□□□□ -0.67
VPS11-207ENST00000620429 CD48P09326 243 aa10.88□□□□□ -0.67
VPS11-207ENST00000620429 SLC9A1P19634 815 aa10.88□□□□□ -0.67
VPS11-207ENST00000620429 HOXA7P31268 230 aaPredicted RBP10.88□□□□□ -0.67
VPS11-207ENST00000620429 CREB5Q02930 508 aa10.88□□□□□ -0.67
VPS11-207ENST00000620429 DLG1Q12959 904 aa10.88□□□□□ -0.67
VPS11-207ENST00000620429 ORC2Q13416 577 aaPredicted RBP10.88□□□□□ -0.67
VPS11-207ENST00000620429 SEPT6Q14141 434 aa10.88□□□□□ -0.67
VPS11-207ENST00000620429 C16orf72Q14CZ0 275 aa10.88□□□□□ -0.67
VPS11-207ENST00000620429 PDK4Q16654 411 aa10.88□□□□□ -0.67
VPS11-207ENST00000620429 EXOC3L4Q17RC7 722 aa10.88□□□□□ -0.67
VPS11-207ENST00000620429 ANKRD13BQ86YJ7 626 aa10.88□□□□□ -0.67
VPS11-207ENST00000620429 U2AF1L4Q8WU68 220 aaKnown RBP10.88□□□□□ -0.67
VPS11-207ENST00000620429 CCDC127Q96BQ5 260 aa10.88□□□□□ -0.67
VPS11-207ENST00000620429 GPATCH1Q9BRR8 931 aaKnown RBP10.88□□□□□ -0.67
VPS11-207ENST00000620429 KLHL4Q9C0H6 718 aa10.88□□□□□ -0.67
VPS11-207ENST00000620429 SLCO1B3Q9NPD5 702 aa10.88□□□□□ -0.67
VPS11-207ENST00000620429 GIN1Q9NXP7 522 aa10.88□□□□□ -0.67
VPS11-207ENST00000620429 LZTS1Q9Y250 596 aa10.88□□□□□ -0.67
VPS11-207ENST00000620429 DAGLAQ9Y4D2 1042 aa10.88□□□□□ -0.67
VPS11-207ENST00000620429 DENRO43583 198 aaKnown RBP10.87□□□□□ -0.67
VPS11-207ENST00000620429 MARCH6O60337 910 aa10.87□□□□□ -0.67
VPS11-207ENST00000620429 FUCA1P04066 466 aa10.87□□□□□ -0.67
VPS11-207ENST00000620429 CDH3P22223 829 aa10.87□□□□□ -0.67
VPS11-207ENST00000620429 ENTPD1P49961 510 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms