RNA–Protein interactions for RNA: ENST00000619898.4

SPCS1-206, Transcript of signal peptidase complex subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SPCS1, Length 4,254 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS1-206ENST00000619898 H3BRJ5 948 aa12.92□□□□□ -0.34
SPCS1-206ENST00000619898 HOXA10P31260 410 aaPredicted RBP12.92□□□□□ -0.34
SPCS1-206ENST00000619898 NAIF1Q69YI7 327 aaPredicted RBP12.92□□□□□ -0.34
SPCS1-206ENST00000619898 SLC30A9Q6PML9 568 aa12.92□□□□□ -0.34
SPCS1-206ENST00000619898 MFSD7Q6UXD7 560 aa12.92□□□□□ -0.34
SPCS1-206ENST00000619898 SPATA24Q86W54 205 aa12.92□□□□□ -0.34
SPCS1-206ENST00000619898 KREMEN1Q96MU8 473 aa12.92□□□□□ -0.34
SPCS1-206ENST00000619898 PAFAH2Q99487 392 aa12.92□□□□□ -0.34
SPCS1-206ENST00000619898 THTPAQ9BU02 230 aa12.92□□□□□ -0.34
SPCS1-206ENST00000619898 IDI2Q9BXS1 227 aa12.92□□□□□ -0.34
SPCS1-206ENST00000619898 KIF9Q9HAQ2 790 aa12.92□□□□□ -0.34
SPCS1-206ENST00000619898 SLCO1B3Q9NPD5 702 aa12.92□□□□□ -0.34
SPCS1-206ENST00000619898 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.92□□□□□ -0.34
SPCS1-206ENST00000619898 BCAP29Q9UHQ4 241 aa12.92□□□□□ -0.34
SPCS1-206ENST00000619898 IGKV6D-41A0A0C4DH26 115 aa12.92□□□□□ -0.34
SPCS1-206ENST00000619898 CAPN9O14815 690 aa12.92□□□□□ -0.34
SPCS1-206ENST00000619898 UNC5CO95185 931 aa12.92□□□□□ -0.34
SPCS1-206ENST00000619898 SSTR1P30872 391 aa12.92□□□□□ -0.34
SPCS1-206ENST00000619898 PTGIRP43119 386 aa12.92□□□□□ -0.34
SPCS1-206ENST00000619898 MTMR2Q13614 643 aa12.92□□□□□ -0.34
SPCS1-206ENST00000619898 TFDP3Q5H9I0 405 aa12.92□□□□□ -0.34
SPCS1-206ENST00000619898 SPOCD1Q6ZMY3 1216 aa12.92□□□□□ -0.34
SPCS1-206ENST00000619898 RGS9BPQ6ZS82 235 aa12.92□□□□□ -0.34
SPCS1-206ENST00000619898 RNF34Q969K3 372 aa12.92□□□□□ -0.34
SPCS1-206ENST00000619898 MRPL4Q9BYD3 311 aaKnown RBP12.92□□□□□ -0.34
SPCS1-206ENST00000619898 DCLRE1BQ9H816 532 aa12.92□□□□□ -0.34
SPCS1-206ENST00000619898 C17orf75Q9HAS0 396 aa12.92□□□□□ -0.34
SPCS1-206ENST00000619898 AVENQ9NQS1 362 aaPredicted RBP12.92□□□□□ -0.34
SPCS1-206ENST00000619898 ZFATQ9P243 1243 aa12.92□□□□□ -0.34
SPCS1-206ENST00000619898 KCNN4O15554 427 aa12.92□□□□□ -0.34
SPCS1-206ENST00000619898 KCNA3P22001 575 aa12.92□□□□□ -0.34
SPCS1-206ENST00000619898 VHLP40337 213 aa12.92□□□□□ -0.34
SPCS1-206ENST00000619898 OTUD4Q01804 1114 aaKnown RBP12.92□□□□□ -0.34
SPCS1-206ENST00000619898 GCNT1Q02742 428 aa12.92□□□□□ -0.34
SPCS1-206ENST00000619898 ASPHQ12797 758 aa12.92□□□□□ -0.34
SPCS1-206ENST00000619898 LRRC36Q1X8D7 754 aa12.92□□□□□ -0.34
SPCS1-206ENST00000619898 C6orf89Q6UWU4 347 aa12.92□□□□□ -0.34
SPCS1-206ENST00000619898 ST13P4Q8IZP2 240 aaPredicted RBP12.92□□□□□ -0.34
SPCS1-206ENST00000619898 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP12.92□□□□□ -0.34
SPCS1-206ENST00000619898 ACTL9Q8TC94 416 aa12.92□□□□□ -0.34
SPCS1-206ENST00000619898 PSPC1Q8WXF1 523 aaKnown RBP12.92□□□□□ -0.34
SPCS1-206ENST00000619898 Q9H521 79 aa12.92□□□□□ -0.34
SPCS1-206ENST00000619898 ZC3H7BQ9UGR2 993 aaKnown RBP12.92□□□□□ -0.34
SPCS1-206ENST00000619898 SPATA31A6Q5VVP1 1343 aa12.91□□□□□ -0.34
SPCS1-206ENST00000619898 GARTP22102 1010 aa12.91□□□□□ -0.34
SPCS1-206ENST00000619898 THOC5Q13769 683 aaKnown RBP12.91□□□□□ -0.34
SPCS1-206ENST00000619898 GEN1Q17RS7 908 aa12.91□□□□□ -0.34
SPCS1-206ENST00000619898 LLGL2Q6P1M3 1020 aa12.91□□□□□ -0.34
SPCS1-206ENST00000619898 CPNE8Q86YQ8 564 aa12.91□□□□□ -0.34
SPCS1-206ENST00000619898 ARID3BQ8IVW6 561 aaPredicted RBP12.91□□□□□ -0.34
SPCS1-206ENST00000619898 ABRAQ8N0Z2 381 aa12.91□□□□□ -0.34
SPCS1-206ENST00000619898 SLC26A7Q8TE54 656 aa12.91□□□□□ -0.34
SPCS1-206ENST00000619898 SMYD2Q9NRG4 433 aa12.91□□□□□ -0.34
SPCS1-206ENST00000619898 POLRMTO00411 1230 aaKnown RBP12.91□□□□□ -0.34
SPCS1-206ENST00000619898 PTPN4P29074 926 aa12.91□□□□□ -0.34
SPCS1-206ENST00000619898 MFSD5Q6N075 450 aa12.91□□□□□ -0.34
SPCS1-206ENST00000619898 DNAAF3Q8N9W5 541 aa12.91□□□□□ -0.34
SPCS1-206ENST00000619898 SLC24A2Q9UI40 661 aa12.91□□□□□ -0.34
SPCS1-206ENST00000619898 ZNF142P52746 1687 aaPredicted RBP12.91□□□□□ -0.34
SPCS1-206ENST00000619898 A8MUI8 341 aa12.91□□□□□ -0.34
SPCS1-206ENST00000619898 TRIM49D1C9J1S8 452 aa12.91□□□□□ -0.34
SPCS1-206ENST00000619898 CFLARO15519 480 aa12.91□□□□□ -0.34
SPCS1-206ENST00000619898 HOXD13P35453 343 aa12.91□□□□□ -0.34
SPCS1-206ENST00000619898 ARL4AP40617 200 aa12.91□□□□□ -0.34
SPCS1-206ENST00000619898 ATP13A4Q4VNC1 1196 aa12.91□□□□□ -0.34
SPCS1-206ENST00000619898 LPAR1Q92633 364 aa12.91□□□□□ -0.34
SPCS1-206ENST00000619898 FGD4Q96M96 766 aa12.91□□□□□ -0.34
SPCS1-206ENST00000619898 PHRF1Q9P1Y6 1649 aaKnown RBP12.91□□□□□ -0.34
SPCS1-206ENST00000619898 MGRN1O60291 552 aa12.91□□□□□ -0.34
SPCS1-206ENST00000619898 RAPH1Q70E73 1250 aa12.91□□□□□ -0.34
SPCS1-206ENST00000619898 RNF149Q8NC42 400 aa12.91□□□□□ -0.34
SPCS1-206ENST00000619898 SYTL5Q8TDW5 730 aaPredicted RBP12.91□□□□□ -0.34
SPCS1-206ENST00000619898 SEMA4DQ92854 862 aa12.91□□□□□ -0.34
SPCS1-206ENST00000619898 SH3GL3Q99963 347 aa12.91□□□□□ -0.34
SPCS1-206ENST00000619898 VPS11Q9H270 941 aa12.91□□□□□ -0.34
SPCS1-206ENST00000619898 PCMTD2Q9NV79 361 aa12.91□□□□□ -0.34
SPCS1-206ENST00000619898 AKT3Q9Y243 479 aa12.91□□□□□ -0.34
SPCS1-206ENST00000619898 M0QZ92 97 aa12.9□□□□□ -0.34
SPCS1-206ENST00000619898 PIAS1O75925 651 aa12.9□□□□□ -0.34
SPCS1-206ENST00000619898 ETS1P14921 441 aa12.9□□□□□ -0.34
SPCS1-206ENST00000619898 ADRA1DP25100 572 aa12.9□□□□□ -0.34
SPCS1-206ENST00000619898 RPA3P35244 121 aaPredicted RBP12.9□□□□□ -0.34
SPCS1-206ENST00000619898 ARL1P40616 181 aaPredicted RBP12.9□□□□□ -0.34
SPCS1-206ENST00000619898 VCPP55072 806 aaKnown RBP12.9□□□□□ -0.34
SPCS1-206ENST00000619898 SPIRE1Q08AE8 756 aa12.9□□□□□ -0.34
SPCS1-206ENST00000619898 PIGWQ7Z7B1 504 aa12.9□□□□□ -0.34
SPCS1-206ENST00000619898 ZCCHC9Q8N567 271 aaKnown RBP12.9□□□□□ -0.34
SPCS1-206ENST00000619898 TCP10LQ8TDR4 215 aa12.9□□□□□ -0.34
SPCS1-206ENST00000619898 MTBPQ96DY7 904 aa12.9□□□□□ -0.34
SPCS1-206ENST00000619898 CENPKQ9BS16 269 aa12.9□□□□□ -0.34
SPCS1-206ENST00000619898 FBXO40Q9UH90 709 aa12.9□□□□□ -0.34
SPCS1-206ENST00000619898 LRP6O75581 1613 aa12.9□□□□□ -0.34
SPCS1-206ENST00000619898 ITGB5P18084 799 aa12.9□□□□□ -0.34
SPCS1-206ENST00000619898 AP3M2P53677 418 aa12.9□□□□□ -0.34
SPCS1-206ENST00000619898 GTF2BQ00403 316 aa12.9□□□□□ -0.34
SPCS1-206ENST00000619898 MCL1Q07820 350 aa12.9□□□□□ -0.34
SPCS1-206ENST00000619898 FAXCQ5TGI0 409 aa12.9□□□□□ -0.34
SPCS1-206ENST00000619898 ZNF75CPQ92670 426 aaPredicted RBP12.9□□□□□ -0.34
SPCS1-206ENST00000619898 NIF3L1Q9GZT8 377 aa12.9□□□□□ -0.34
SPCS1-206ENST00000619898 SLC38A10Q9HBR0 1119 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms