RNA–Protein interactions for RNA: ENST00000618621.4

LPP-221, Transcript of LIM domain containing preferred translocation partner in lipoma, humanhuman

TSL 1 (best) BASIC

Gene LPP, Length 18,277 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPP-221ENST00000618621 RAVER2Q9HCJ3 691 aaKnown RBP3.19□□□□□ -1.9
LPP-221ENST00000618621 RBAKQ9NYW8 714 aaPredicted RBP3.19□□□□□ -1.9
LPP-221ENST00000618621 O00370 1275 aa3.19□□□□□ -1.9
LPP-221ENST00000618621 MYL2P10916 166 aa3.19□□□□□ -1.9
LPP-221ENST00000618621 HIC1Q14526 733 aa3.19□□□□□ -1.9
LPP-221ENST00000618621 KYNUQ16719 465 aa3.19□□□□□ -1.9
LPP-221ENST00000618621 ZNF34Q8IZ26 560 aa3.19□□□□□ -1.9
LPP-221ENST00000618621 PACSIN1Q9BY11 444 aa3.19□□□□□ -1.9
LPP-221ENST00000618621 XAB2Q9HCS7 855 aaKnown RBP3.19□□□□□ -1.9
LPP-221ENST00000618621 PCMTD2Q9NV79 361 aa3.19□□□□□ -1.9
LPP-221ENST00000618621 SUN2Q9UH99 717 aa3.19□□□□□ -1.9
LPP-221ENST00000618621 HERC5Q9UII4 1024 aaKnown RBP3.19□□□□□ -1.9
LPP-221ENST00000618621 FAM32AQ9Y421 112 aaKnown RBP3.19□□□□□ -1.9
LPP-221ENST00000618621 ENO1P06733 434 aaKnown RBP3.19□□□□□ -1.9
LPP-221ENST00000618621 MYBP10242 640 aa3.19□□□□□ -1.9
LPP-221ENST00000618621 ITGB3BPQ13352 177 aaPredicted RBP3.19□□□□□ -1.9
LPP-221ENST00000618621 ACCSLQ4AC99 568 aa3.19□□□□□ -1.9
LPP-221ENST00000618621 RNF135Q8IUD6 432 aa3.19□□□□□ -1.9
LPP-221ENST00000618621 MCUQ8NE86 351 aa3.19□□□□□ -1.9
LPP-221ENST00000618621 OR6P1Q8NGX9 317 aa3.19□□□□□ -1.9
LPP-221ENST00000618621 EXD1Q8NHP7 514 aa3.19□□□□□ -1.9
LPP-221ENST00000618621 MXRA8Q9BRK3 442 aa3.19□□□□□ -1.9
LPP-221ENST00000618621 PHACTR1Q9C0D0 580 aa3.19□□□□□ -1.9
LPP-221ENST00000618621 TBC1D23Q9NUY8 699 aa3.19□□□□□ -1.9
LPP-221ENST00000618621 ZNF212Q9UDV6 495 aa3.19□□□□□ -1.9
LPP-221ENST00000618621 PAIP2BQ9ULR5 123 aaKnown RBP3.19□□□□□ -1.9
LPP-221ENST00000618621 SPATA31A5Q5VU36 1347 aa3.19□□□□□ -1.9
LPP-221ENST00000618621 SPATA31A7Q8IWB4 1347 aa3.19□□□□□ -1.9
LPP-221ENST00000618621 TMEM247A6NEH6 219 aa3.19□□□□□ -1.9
LPP-221ENST00000618621 AKR1B1P15121 316 aa3.19□□□□□ -1.9
LPP-221ENST00000618621 SLC9A1P19634 815 aa3.19□□□□□ -1.9
LPP-221ENST00000618621 DNAJA1P31689 397 aaKnown RBP3.19□□□□□ -1.9
LPP-221ENST00000618621 STAT5BP51692 787 aa3.19□□□□□ -1.9
LPP-221ENST00000618621 POU5F1Q01860 360 aaKnown RBP3.19□□□□□ -1.9
LPP-221ENST00000618621 STILQ15468 1287 aa3.19□□□□□ -1.9
LPP-221ENST00000618621 APTXQ7Z2E3 356 aaKnown RBP3.19□□□□□ -1.9
LPP-221ENST00000618621 PPIL6Q8IXY8 311 aa3.19□□□□□ -1.9
LPP-221ENST00000618621 PAWRQ96IZ0 340 aaKnown RBP3.19□□□□□ -1.9
LPP-221ENST00000618621 VCPIP1Q96JH7 1222 aa3.19□□□□□ -1.9
LPP-221ENST00000618621 DCLRE1BQ9H816 532 aa3.19□□□□□ -1.9
LPP-221ENST00000618621 HEY2Q9UBP5 337 aa3.19□□□□□ -1.9
LPP-221ENST00000618621 WARS2Q9UGM6 360 aaKnown RBP3.19□□□□□ -1.9
LPP-221ENST00000618621 TBX20Q9UMR3 447 aa3.19□□□□□ -1.9
LPP-221ENST00000618621 NAALADL1Q9UQQ1 740 aa3.19□□□□□ -1.9
LPP-221ENST00000618621 IQSEC2Q5JU85 1478 aa3.19□□□□□ -1.9
LPP-221ENST00000618621 EIF4E1BA6NMX2 242 aaKnown RBP3.19□□□□□ -1.9
LPP-221ENST00000618621 PJA2O43164 708 aa3.19□□□□□ -1.9
LPP-221ENST00000618621 DGAT1O75907 488 aa3.19□□□□□ -1.9
LPP-221ENST00000618621 APRTP07741 180 aa3.19□□□□□ -1.9
LPP-221ENST00000618621 CTCFP49711 727 aaPredicted RBP3.19□□□□□ -1.9
LPP-221ENST00000618621 NLRP11P59045 1033 aaKnown RBP3.19□□□□□ -1.9
LPP-221ENST00000618621 YWHAHQ04917 246 aaPredicted RBP3.19□□□□□ -1.9
LPP-221ENST00000618621 SLC12A1Q13621 1099 aa3.19□□□□□ -1.9
LPP-221ENST00000618621 RBBP8NLQ8NC74 664 aaPredicted RBP3.19□□□□□ -1.9
LPP-221ENST00000618621 KAT2BQ92831 832 aa3.19□□□□□ -1.9
LPP-221ENST00000618621 SEMA4AQ9H3S1 761 aa3.19□□□□□ -1.9
LPP-221ENST00000618621 SIK3Q9Y2K2 1263 aa3.19□□□□□ -1.9
LPP-221ENST00000618621 HEY1Q9Y5J3 304 aa3.19□□□□□ -1.9
LPP-221ENST00000618621 EMSYQ7Z589 1322 aa3.19□□□□□ -1.9
LPP-221ENST00000618621 COQ9O75208 318 aa3.19□□□□□ -1.9
LPP-221ENST00000618621 TDP2O95551 362 aa3.19□□□□□ -1.9
LPP-221ENST00000618621 TTC39BQ5VTQ0 682 aaPredicted RBP3.19□□□□□ -1.9
LPP-221ENST00000618621 ANKRD23Q86SG2 305 aa3.19□□□□□ -1.9
LPP-221ENST00000618621 ZBTB10Q96DT7 871 aa3.19□□□□□ -1.9
LPP-221ENST00000618621 HES6Q96HZ4 224 aa3.19□□□□□ -1.9
LPP-221ENST00000618621 SAR1AQ9NR31 198 aa3.19□□□□□ -1.9
LPP-221ENST00000618621 RAB6BQ9NRW1 208 aa3.19□□□□□ -1.9
LPP-221ENST00000618621 PLSCR2Q9NRY7 297 aa3.19□□□□□ -1.9
LPP-221ENST00000618621 JCADQ9P266 1359 aa3.19□□□□□ -1.9
LPP-221ENST00000618621 MTSS1O43312 755 aa3.19□□□□□ -1.9
LPP-221ENST00000618621 NDUFS3O75489 264 aa3.19□□□□□ -1.9
LPP-221ENST00000618621 NMT1P30419 496 aaKnown RBP3.19□□□□□ -1.9
LPP-221ENST00000618621 PHKA2P46019 1235 aa3.19□□□□□ -1.9
LPP-221ENST00000618621 KCNJ2P63252 427 aa3.19□□□□□ -1.9
LPP-221ENST00000618621 SLC15A2Q16348 729 aa3.19□□□□□ -1.9
LPP-221ENST00000618621 LONRF1Q17RB8 773 aa3.19□□□□□ -1.9
LPP-221ENST00000618621 ZNF746Q6NUN9 644 aaPredicted RBP3.19□□□□□ -1.9
LPP-221ENST00000618621 IYDQ6PHW0 289 aa3.19□□□□□ -1.9
LPP-221ENST00000618621 TMC3Q7Z5M5 1100 aa3.19□□□□□ -1.9
LPP-221ENST00000618621 TTLL6Q8N841 843 aa3.19□□□□□ -1.9
LPP-221ENST00000618621 TMEM143Q96AN5 459 aa3.19□□□□□ -1.9
LPP-221ENST00000618621 MAML3Q96JK9 1138 aa3.19□□□□□ -1.9
LPP-221ENST00000618621 ZSWIM1Q9BR11 485 aa3.19□□□□□ -1.9
LPP-221ENST00000618621 GINM1Q9NU53 330 aa3.19□□□□□ -1.9
LPP-221ENST00000618621 NYAP2Q9P242 653 aa3.19□□□□□ -1.9
LPP-221ENST00000618621 SFMBT1Q9UHJ3 866 aa3.19□□□□□ -1.9
LPP-221ENST00000618621 TAGLN3Q9UI15 199 aa3.19□□□□□ -1.9
LPP-221ENST00000618621 SUPT3HO75486 399 aa3.19□□□□□ -1.9
LPP-221ENST00000618621 IL18RAPO95256 599 aa3.19□□□□□ -1.9
LPP-221ENST00000618621 KLRC1P26715 233 aa3.19□□□□□ -1.9
LPP-221ENST00000618621 PTPN4P29074 926 aa3.19□□□□□ -1.9
LPP-221ENST00000618621 SERPINB10P48595 397 aa3.19□□□□□ -1.9
LPP-221ENST00000618621 PEX5P50542 639 aa3.19□□□□□ -1.9
LPP-221ENST00000618621 CHI3L2Q15782 390 aa3.19□□□□□ -1.9
LPP-221ENST00000618621 RGS9BPQ6ZS82 235 aa3.19□□□□□ -1.9
LPP-221ENST00000618621 SPATA18Q8TC71 538 aa3.19□□□□□ -1.9
LPP-221ENST00000618621 TRIM54Q9BYV2 358 aa3.19□□□□□ -1.9
LPP-221ENST00000618621 CELF4Q9BZC1 486 aaKnown RBP3.19□□□□□ -1.9
LPP-221ENST00000618621 IRF2BPLQ9H1B7 796 aa3.19□□□□□ -1.9
LPP-221ENST00000618621 VPS33BQ9H267 617 aa3.19□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms