RNA–Protein interactions for RNA: ENST00000617848.4

CNTNAP3B-213, Transcript of contactin associated protein like 3B, humanhuman

TSL 3

Gene CNTNAP3B, Length 290 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3B-213ENST00000617848 NDST1P52848 882 aa9.28□□□□□ -0.92
CNTNAP3B-213ENST00000617848 SOX4Q06945 474 aaPredicted RBP9.28□□□□□ -0.92
CNTNAP3B-213ENST00000617848 STILQ15468 1287 aa9.28□□□□□ -0.92
CNTNAP3B-213ENST00000617848 SGO2Q562F6 1265 aa9.28□□□□□ -0.92
CNTNAP3B-213ENST00000617848 C11orf63Q6NUN7 778 aa9.28□□□□□ -0.92
CNTNAP3B-213ENST00000617848 DENND1BQ6P3S1 775 aa9.28□□□□□ -0.92
CNTNAP3B-213ENST00000617848 MON1BQ7L1V2 547 aa9.28□□□□□ -0.92
CNTNAP3B-213ENST00000617848 DPH6Q7L8W6 267 aa9.28□□□□□ -0.92
CNTNAP3B-213ENST00000617848 DAAM2Q86T65 1068 aa9.28□□□□□ -0.92
CNTNAP3B-213ENST00000617848 CTAGE6Q86UF2 777 aa9.28□□□□□ -0.92
CNTNAP3B-213ENST00000617848 NT5DC3Q86UY8 548 aa9.28□□□□□ -0.92
CNTNAP3B-213ENST00000617848 UNC93AQ86WB7 457 aa9.28□□□□□ -0.92
CNTNAP3B-213ENST00000617848 PASD1Q8IV76 773 aa9.28□□□□□ -0.92
CNTNAP3B-213ENST00000617848 CTAGE4Q8IX94 777 aa9.28□□□□□ -0.92
CNTNAP3B-213ENST00000617848 ZNF564Q8TBZ8 553 aaPredicted RBP9.28□□□□□ -0.92
CNTNAP3B-213ENST00000617848 UBXN4Q92575 508 aa9.28□□□□□ -0.92
CNTNAP3B-213ENST00000617848 GOLGA1Q92805 767 aa9.28□□□□□ -0.92
CNTNAP3B-213ENST00000617848 LPPQ93052 612 aa9.28□□□□□ -0.92
CNTNAP3B-213ENST00000617848 RPGRIP1Q96KN7 1286 aa9.28□□□□□ -0.92
CNTNAP3B-213ENST00000617848 TWNKQ96RR1 684 aa9.28□□□□□ -0.92
CNTNAP3B-213ENST00000617848 GAD1Q99259 594 aa9.28□□□□□ -0.92
CNTNAP3B-213ENST00000617848 ZSWIM1Q9BR11 485 aa9.28□□□□□ -0.92
CNTNAP3B-213ENST00000617848 MRPL45Q9BRJ2 306 aaKnown RBP9.28□□□□□ -0.92
CNTNAP3B-213ENST00000617848 RSAD1Q9HA92 442 aa9.28□□□□□ -0.92
CNTNAP3B-213ENST00000617848 MRPL47Q9HD33 250 aaKnown RBP9.28□□□□□ -0.92
CNTNAP3B-213ENST00000617848 RGS18Q9NS28 235 aa9.28□□□□□ -0.92
CNTNAP3B-213ENST00000617848 MIOSQ9NXC5 875 aa9.28□□□□□ -0.92
CNTNAP3B-213ENST00000617848 COG5Q9UP83 839 aa9.28□□□□□ -0.92
CNTNAP3B-213ENST00000617848 FAM170AA1A519 330 aa9.27□□□□□ -0.93
CNTNAP3B-213ENST00000617848 ARL5CA6NH57 179 aa9.27□□□□□ -0.93
CNTNAP3B-213ENST00000617848 MEIS3P2A8K0S8 358 aa9.27□□□□□ -0.93
CNTNAP3B-213ENST00000617848 SPTLC1O15269 473 aa9.27□□□□□ -0.93
CNTNAP3B-213ENST00000617848 HUS1O60921 280 aa9.27□□□□□ -0.93
CNTNAP3B-213ENST00000617848 EOMESO95936 686 aa9.27□□□□□ -0.93
CNTNAP3B-213ENST00000617848 MYCP01106 439 aaPredicted RBP9.27□□□□□ -0.93
CNTNAP3B-213ENST00000617848 MMP8P22894 467 aa9.27□□□□□ -0.93
CNTNAP3B-213ENST00000617848 PAX3P23760 479 aa9.27□□□□□ -0.93
CNTNAP3B-213ENST00000617848 MLH1P40692 756 aa9.27□□□□□ -0.93
CNTNAP3B-213ENST00000617848 FAM189BP81408 668 aa9.27□□□□□ -0.93
CNTNAP3B-213ENST00000617848 PTP4A2Q12974 167 aa9.27□□□□□ -0.93
CNTNAP3B-213ENST00000617848 PLEKHA7Q6IQ23 1121 aa9.27□□□□□ -0.93
CNTNAP3B-213ENST00000617848 MMS22LQ6ZRQ5 1243 aa9.27□□□□□ -0.93
CNTNAP3B-213ENST00000617848 LRRC8DQ7L1W4 858 aa9.27□□□□□ -0.93
CNTNAP3B-213ENST00000617848 RSRC2Q7L4I2 434 aaKnown RBP9.27□□□□□ -0.93
CNTNAP3B-213ENST00000617848 LIMS2Q7Z4I7 341 aa9.27□□□□□ -0.93
CNTNAP3B-213ENST00000617848 ZNF598Q86UK7 904 aaKnown RBP9.27□□□□□ -0.93
CNTNAP3B-213ENST00000617848 RTN4RL1Q86UN2 441 aaPredicted RBP9.27□□□□□ -0.93
CNTNAP3B-213ENST00000617848 ERICH1Q86X53 443 aa9.27□□□□□ -0.93
CNTNAP3B-213ENST00000617848 ECHDC2Q86YB7 292 aa9.27□□□□□ -0.93
CNTNAP3B-213ENST00000617848 CREG2Q8IUH2 290 aa9.27□□□□□ -0.93
CNTNAP3B-213ENST00000617848 FAM126BQ8IXS8 530 aa9.27□□□□□ -0.93
CNTNAP3B-213ENST00000617848 WDTC1Q8N5D0 677 aa9.27□□□□□ -0.93
CNTNAP3B-213ENST00000617848 TOP6BLQ8N6T0 577 aa9.27□□□□□ -0.93
CNTNAP3B-213ENST00000617848 LRRN4CLQ8ND94 238 aa9.27□□□□□ -0.93
CNTNAP3B-213ENST00000617848 C1orf131Q8NDD1 294 aaKnown RBP9.27□□□□□ -0.93
CNTNAP3B-213ENST00000617848 GSTCDQ8NEC7 633 aa9.27□□□□□ -0.93
CNTNAP3B-213ENST00000617848 OR6B3Q8NGW1 331 aa9.27□□□□□ -0.93
CNTNAP3B-213ENST00000617848 DDX27Q96GQ7 796 aaKnown RBP9.27□□□□□ -0.93
CNTNAP3B-213ENST00000617848 CAPZA3Q96KX2 299 aa9.27□□□□□ -0.93
CNTNAP3B-213ENST00000617848 ZFP42Q96MM3 310 aa9.27□□□□□ -0.93
CNTNAP3B-213ENST00000617848 C11orf70Q9BRQ4 267 aa9.27□□□□□ -0.93
CNTNAP3B-213ENST00000617848 SELENOOQ9BVL4 669 aa9.27□□□□□ -0.93
CNTNAP3B-213ENST00000617848 FTHL17Q9BXU8 183 aa9.27□□□□□ -0.93
CNTNAP3B-213ENST00000617848 SNX25Q9H3E2 840 aa9.27□□□□□ -0.93
CNTNAP3B-213ENST00000617848 GOLGA2P5Q9HBQ8 144 aa9.27□□□□□ -0.93
CNTNAP3B-213ENST00000617848 ALG6Q9Y672 507 aa9.27□□□□□ -0.93
CNTNAP3B-213ENST00000617848 SCINQ9Y6U3 715 aa9.27□□□□□ -0.93
CNTNAP3B-213ENST00000617848 CITO14578 2027 aa9.27□□□□□ -0.93
CNTNAP3B-213ENST00000617848 RALGAPA2Q2PPJ7 1873 aa9.26□□□□□ -0.93
CNTNAP3B-213ENST00000617848 TMEM110-MUSTN1A8MSY1 372 aa9.26□□□□□ -0.93
CNTNAP3B-213ENST00000617848 A8MXQ7 604 aa9.26□□□□□ -0.93
CNTNAP3B-213ENST00000617848 MIF4GDA9UHW6 222 aaKnown RBP9.26□□□□□ -0.93
CNTNAP3B-213ENST00000617848 C9IYK1 514 aa9.26□□□□□ -0.93
CNTNAP3B-213ENST00000617848 O00370 1275 aa9.26□□□□□ -0.93
CNTNAP3B-213ENST00000617848 CYB561D2O14569 222 aa9.26□□□□□ -0.93
CNTNAP3B-213ENST00000617848 KCNK3O14649 394 aa9.26□□□□□ -0.93
CNTNAP3B-213ENST00000617848 ZNF185O15231 689 aa9.26□□□□□ -0.93
CNTNAP3B-213ENST00000617848 MICAL2O94851 1124 aa9.26□□□□□ -0.93
CNTNAP3B-213ENST00000617848 TFRCP02786 760 aaKnown RBP9.26□□□□□ -0.93
CNTNAP3B-213ENST00000617848 WARSP23381 471 aaKnown RBP9.26□□□□□ -0.93
CNTNAP3B-213ENST00000617848 RRM1P23921 792 aa9.26□□□□□ -0.93
CNTNAP3B-213ENST00000617848 GNL1P36915 607 aaPredicted RBP9.26□□□□□ -0.93
CNTNAP3B-213ENST00000617848 SCNN1GP51170 649 aa9.26□□□□□ -0.93
CNTNAP3B-213ENST00000617848 LILRA4P59901 499 aa9.26□□□□□ -0.93
CNTNAP3B-213ENST00000617848 LSM11P83369 360 aaKnown RBP eCLIP9.26□□□□□ -0.93
CNTNAP3B-213ENST00000617848 ORC1Q13415 861 aa9.26□□□□□ -0.93
CNTNAP3B-213ENST00000617848 MESDQ14696 234 aa9.26□□□□□ -0.93
CNTNAP3B-213ENST00000617848 MBTPS1Q14703 1052 aa9.26□□□□□ -0.93
CNTNAP3B-213ENST00000617848 NAA30Q147X3 362 aaPredicted RBP9.26□□□□□ -0.93
CNTNAP3B-213ENST00000617848 SOWAHAQ2M3V2 549 aa9.26□□□□□ -0.93
CNTNAP3B-213ENST00000617848 ERCC6LQ2NKX8 1250 aa9.26□□□□□ -0.93
CNTNAP3B-213ENST00000617848 CFAP221Q4G0U5 840 aa9.26□□□□□ -0.93
CNTNAP3B-213ENST00000617848 CCDC181Q5TID7 509 aa9.26□□□□□ -0.93
CNTNAP3B-213ENST00000617848 LCLAT1Q6UWP7 414 aa9.26□□□□□ -0.93
CNTNAP3B-213ENST00000617848 SLC39A5Q6ZMH5 540 aa9.26□□□□□ -0.93
CNTNAP3B-213ENST00000617848 SLC24A5Q71RS6 500 aa9.26□□□□□ -0.93
CNTNAP3B-213ENST00000617848 ZNF572Q7Z3I7 529 aaPredicted RBP9.26□□□□□ -0.93
CNTNAP3B-213ENST00000617848 CTU1Q7Z7A3 348 aaKnown RBP9.26□□□□□ -0.93
CNTNAP3B-213ENST00000617848 CRYBG2Q8N1P7 616 aa9.26□□□□□ -0.93
CNTNAP3B-213ENST00000617848 RNF169Q8NCN4 708 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms