RNA–Protein interactions for RNA: ENST00000617310.4

SMARCA1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

TSL 2

Gene SMARCA1, Length 4,291 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-205ENST00000617310 SKIP12755 728 aa10.64□□□□□ -0.71
SMARCA1-205ENST00000617310 NR1D1P20393 614 aa10.64□□□□□ -0.71
SMARCA1-205ENST00000617310 MLH1P40692 756 aa10.64□□□□□ -0.71
SMARCA1-205ENST00000617310 CUL1Q13616 776 aa10.64□□□□□ -0.71
SMARCA1-205ENST00000617310 ANGPTL8Q6UXH0 198 aa10.64□□□□□ -0.71
SMARCA1-205ENST00000617310 ZNF384Q8TF68 577 aa10.64□□□□□ -0.71
SMARCA1-205ENST00000617310 RIN2Q8WYP3 895 aaPredicted RBP10.64□□□□□ -0.71
SMARCA1-205ENST00000617310 RSAD1Q9HA92 442 aa10.64□□□□□ -0.71
SMARCA1-205ENST00000617310 OLFML3Q9NRN5 406 aa10.64□□□□□ -0.71
SMARCA1-205ENST00000617310 ZFATQ9P243 1243 aa10.64□□□□□ -0.71
SMARCA1-205ENST00000617310 PLAGL2Q9UPG8 496 aa10.64□□□□□ -0.71
SMARCA1-205ENST00000617310 CDY2AQ9Y6F7 541 aa10.64□□□□□ -0.71
SMARCA1-205ENST00000617310 IQANK1A0A1B0GTG1 560 aa10.63□□□□□ -0.71
SMARCA1-205ENST00000617310 TTLL13PA6NNM8 815 aa10.63□□□□□ -0.71
SMARCA1-205ENST00000617310 LACTBL1A8MY62 500 aa10.63□□□□□ -0.71
SMARCA1-205ENST00000617310 NT5C1B-RDH14C9J2C7 533 aa10.63□□□□□ -0.71
SMARCA1-205ENST00000617310 NVLO15381 856 aaKnown RBP10.63□□□□□ -0.71
SMARCA1-205ENST00000617310 CFLARO15519 480 aa10.63□□□□□ -0.71
SMARCA1-205ENST00000617310 TBC1D12O60347 775 aa10.63□□□□□ -0.71
SMARCA1-205ENST00000617310 PPP1R11O60927 126 aaPredicted RBP10.63□□□□□ -0.71
SMARCA1-205ENST00000617310 KRT38O76015 456 aa10.63□□□□□ -0.71
SMARCA1-205ENST00000617310 KITP10721 976 aa10.63□□□□□ -0.71
SMARCA1-205ENST00000617310 NDST1P52848 882 aa10.63□□□□□ -0.71
SMARCA1-205ENST00000617310 CSE1LP55060 971 aaKnown RBP10.63□□□□□ -0.71
SMARCA1-205ENST00000617310 TAP1Q03518 808 aa10.63□□□□□ -0.71
SMARCA1-205ENST00000617310 UGCGQ16739 394 aa10.63□□□□□ -0.71
SMARCA1-205ENST00000617310 SAMD3Q8N6K7 520 aa10.63□□□□□ -0.71
SMARCA1-205ENST00000617310 TRIM62Q9BVG3 475 aa10.63□□□□□ -0.71
SMARCA1-205ENST00000617310 CIPCQ9C0C6 399 aa10.63□□□□□ -0.71
SMARCA1-205ENST00000617310 LACRTQ9GZZ8 138 aa10.63□□□□□ -0.71
SMARCA1-205ENST00000617310 DNAJC18Q9H819 358 aa10.63□□□□□ -0.71
SMARCA1-205ENST00000617310 OSGEPQ9NPF4 335 aa10.63□□□□□ -0.71
SMARCA1-205ENST00000617310 SLC12A8A0AV02 714 aa10.63□□□□□ -0.71
SMARCA1-205ENST00000617310 SPTLC1O15269 473 aa10.63□□□□□ -0.71
SMARCA1-205ENST00000617310 B4GALT5O43286 388 aa10.63□□□□□ -0.71
SMARCA1-205ENST00000617310 PSMD10O75832 226 aa10.63□□□□□ -0.71
SMARCA1-205ENST00000617310 TYK2P29597 1187 aa10.63□□□□□ -0.71
SMARCA1-205ENST00000617310 PPARGP37231 505 aaPredicted RBP10.63□□□□□ -0.71
SMARCA1-205ENST00000617310 LIG3P49916 1009 aa10.63□□□□□ -0.71
SMARCA1-205ENST00000617310 STX1BP61266 288 aa10.63□□□□□ -0.71
SMARCA1-205ENST00000617310 DRP2Q13474 957 aa10.63□□□□□ -0.71
SMARCA1-205ENST00000617310 P3H1Q32P28 736 aa10.63□□□□□ -0.71
SMARCA1-205ENST00000617310 EFHC1Q5JVL4 640 aa10.63□□□□□ -0.71
SMARCA1-205ENST00000617310 ZNF280DQ6N043 979 aa10.63□□□□□ -0.71
SMARCA1-205ENST00000617310 KLC3Q6P597 504 aa10.63□□□□□ -0.71
SMARCA1-205ENST00000617310 EMBQ6PCB8 327 aa10.63□□□□□ -0.71
SMARCA1-205ENST00000617310 PALB2Q86YC2 1186 aa10.63□□□□□ -0.71
SMARCA1-205ENST00000617310 APOL2Q9BQE5 337 aa10.63□□□□□ -0.71
SMARCA1-205ENST00000617310 SYT15Q9BQS2 421 aa10.63□□□□□ -0.71
SMARCA1-205ENST00000617310 APOL5Q9BWW9 433 aa10.63□□□□□ -0.71
SMARCA1-205ENST00000617310 RNPEPQ9H4A4 650 aa10.63□□□□□ -0.71
SMARCA1-205ENST00000617310 WDCPQ9H6R7 721 aa10.63□□□□□ -0.71
SMARCA1-205ENST00000617310 INTS13Q9NVM9 706 aa10.63□□□□□ -0.71
SMARCA1-205ENST00000617310 BCL9LQ86UU0 1499 aa10.63□□□□□ -0.71
SMARCA1-205ENST00000617310 CNTNAP2Q9UHC6 1331 aa10.63□□□□□ -0.71
SMARCA1-205ENST00000617310 SHPRHQ149N8 1683 aa10.63□□□□□ -0.71
SMARCA1-205ENST00000617310 C3orf70A6NLC5 250 aaPredicted RBP10.63□□□□□ -0.71
SMARCA1-205ENST00000617310 A6NNZ2 444 aa10.63□□□□□ -0.71
SMARCA1-205ENST00000617310 GJB6O95452 261 aa10.63□□□□□ -0.71
SMARCA1-205ENST00000617310 CD52P31358 61 aa10.63□□□□□ -0.71
SMARCA1-205ENST00000617310 AKT1P31749 480 aa10.63□□□□□ -0.71
SMARCA1-205ENST00000617310 PCK1P35558 622 aa10.63□□□□□ -0.71
SMARCA1-205ENST00000617310 IL1RL1Q01638 556 aa10.63□□□□□ -0.71
SMARCA1-205ENST00000617310 ITGB3BPQ13352 177 aaPredicted RBP10.63□□□□□ -0.71
SMARCA1-205ENST00000617310 PIGHQ14442 188 aaPredicted RBP10.63□□□□□ -0.71
SMARCA1-205ENST00000617310 TUBB8Q3ZCM7 444 aa10.63□□□□□ -0.71
SMARCA1-205ENST00000617310 ZCCHC17Q9NP64 241 aaKnown RBP10.63□□□□□ -0.71
SMARCA1-205ENST00000617310 GTSE1Q9NYZ3 720 aa10.63□□□□□ -0.71
SMARCA1-205ENST00000617310 BTBD7Q9P203 1132 aa10.63□□□□□ -0.71
SMARCA1-205ENST00000617310 DBR1Q9UK59 544 aaKnown RBP10.63□□□□□ -0.71
SMARCA1-205ENST00000617310 A0A0G2JND7 137 aa10.62□□□□□ -0.71
SMARCA1-205ENST00000617310 SLC15A5A6NIM6 579 aa10.62□□□□□ -0.71
SMARCA1-205ENST00000617310 ANKRD65E5RJM6 399 aa10.62□□□□□ -0.71
SMARCA1-205ENST00000617310 H0Y626 953 aa10.62□□□□□ -0.71
SMARCA1-205ENST00000617310 HIF1AQ16665 826 aa10.62□□□□□ -0.71
SMARCA1-205ENST00000617310 CCDC157Q569K6 752 aa10.62□□□□□ -0.71
SMARCA1-205ENST00000617310 LBX2Q6XYB7 198 aa10.62□□□□□ -0.71
SMARCA1-205ENST00000617310 TADA2BQ86TJ2 420 aa10.62□□□□□ -0.71
SMARCA1-205ENST00000617310 ARHGAP24Q8N264 748 aa10.62□□□□□ -0.71
SMARCA1-205ENST00000617310 KCTD17Q8N5Z5 321 aa10.62□□□□□ -0.71
SMARCA1-205ENST00000617310 FAM136AQ96C01 138 aa10.62□□□□□ -0.71
SMARCA1-205ENST00000617310 KLF6Q99612 283 aaPredicted RBP10.62□□□□□ -0.71
SMARCA1-205ENST00000617310 MAGEB5Q9BZ81 275 aa10.62□□□□□ -0.71
SMARCA1-205ENST00000617310 FBXL5Q9UKA1 691 aa10.62□□□□□ -0.71
SMARCA1-205ENST00000617310 P4HA2O15460 535 aa10.62□□□□□ -0.71
SMARCA1-205ENST00000617310 SLC26A4O43511 780 aa10.62□□□□□ -0.71
SMARCA1-205ENST00000617310 SUN1O94901 812 aa10.62□□□□□ -0.71
SMARCA1-205ENST00000617310 HSPA4LO95757 839 aa10.62□□□□□ -0.71
SMARCA1-205ENST00000617310 SMIM10L2AP0DMW4 78 aa10.62□□□□□ -0.71
SMARCA1-205ENST00000617310 SMIM10L2BP0DMW5 78 aa10.62□□□□□ -0.71
SMARCA1-205ENST00000617310 GLRA2P23416 452 aa10.62□□□□□ -0.71
SMARCA1-205ENST00000617310 AVPR1AP37288 418 aa10.62□□□□□ -0.71
SMARCA1-205ENST00000617310 MAGOHP61326 146 aaKnown RBP10.62□□□□□ -0.71
SMARCA1-205ENST00000617310 CDR2Q01850 454 aa10.62□□□□□ -0.71
SMARCA1-205ENST00000617310 EEF1DP3Q658K8 133 aa10.62□□□□□ -0.71
SMARCA1-205ENST00000617310 NUDT18Q6ZVK8 323 aa10.62□□□□□ -0.71
SMARCA1-205ENST00000617310 FAM71DQ8N9W8 422 aa10.62□□□□□ -0.71
SMARCA1-205ENST00000617310 ATL2Q8NHH9 583 aa10.62□□□□□ -0.71
SMARCA1-205ENST00000617310 COG1Q8WTW3 980 aa10.62□□□□□ -0.71
SMARCA1-205ENST00000617310 SH3KBP1Q96B97 665 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms