RNA–Protein interactions for RNA: ENST00000617246.4

LPP-220, Transcript of LIM domain containing preferred translocation partner in lipoma, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LPP, Length 18,220 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPP-220ENST00000617246 CHRNA1P02708 482 aa3.52□□□□□ -1.85
LPP-220ENST00000617246 RHOCP08134 193 aa3.52□□□□□ -1.85
LPP-220ENST00000617246 NFKB1P19838 968 aa3.52□□□□□ -1.85
LPP-220ENST00000617246 LHX1P48742 406 aa3.52□□□□□ -1.85
LPP-220ENST00000617246 XRCC4Q13426 336 aa3.52□□□□□ -1.85
LPP-220ENST00000617246 PTPN14Q15678 1187 aa3.52□□□□□ -1.85
LPP-220ENST00000617246 NIPAL1Q6NVV3 410 aa3.52□□□□□ -1.85
LPP-220ENST00000617246 CROCCP2Q86T23 111 aa3.52□□□□□ -1.85
LPP-220ENST00000617246 SLC51AQ86UW1 340 aa3.52□□□□□ -1.85
LPP-220ENST00000617246 TICAM2Q86XR7 235 aa3.52□□□□□ -1.85
LPP-220ENST00000617246 NEUROG2Q9H2A3 272 aa3.52□□□□□ -1.85
LPP-220ENST00000617246 SUDS3Q9H7L9 328 aaPredicted RBP3.52□□□□□ -1.85
LPP-220ENST00000617246 INTUQ9ULD6 942 aa3.52□□□□□ -1.85
LPP-220ENST00000617246 FAM170AA1A519 330 aa3.52□□□□□ -1.85
LPP-220ENST00000617246 ARIH2O95376 493 aa3.52□□□□□ -1.85
LPP-220ENST00000617246 TGM2P21980 687 aa3.52□□□□□ -1.85
LPP-220ENST00000617246 OSTNP61366 133 aa3.52□□□□□ -1.85
LPP-220ENST00000617246 SPIDRQ14159 915 aa3.52□□□□□ -1.85
LPP-220ENST00000617246 KRT24Q2M2I5 525 aa3.52□□□□□ -1.85
LPP-220ENST00000617246 ZSCAN23Q3MJ62 389 aa3.52□□□□□ -1.85
LPP-220ENST00000617246 IYDQ6PHW0 289 aa3.52□□□□□ -1.85
LPP-220ENST00000617246 RRAGAQ7L523 313 aa3.52□□□□□ -1.85
LPP-220ENST00000617246 ZSCAN30Q86W11 494 aa3.52□□□□□ -1.85
LPP-220ENST00000617246 HEATR4Q86WZ0 1026 aa3.52□□□□□ -1.85
LPP-220ENST00000617246 DEPDC1BQ8WUY9 529 aa3.52□□□□□ -1.85
LPP-220ENST00000617246 ZPBPQ9BS86 351 aa3.52□□□□□ -1.85
LPP-220ENST00000617246 MYL10Q9BUA6 226 aa3.52□□□□□ -1.85
LPP-220ENST00000617246 CHST12Q9NRB3 414 aa3.52□□□□□ -1.85
LPP-220ENST00000617246 PRDM4Q9UKN5 801 aa3.52□□□□□ -1.85
LPP-220ENST00000617246 SLC27A6Q9Y2P4 619 aa3.52□□□□□ -1.85
LPP-220ENST00000617246 GDAQ9Y2T3 454 aa3.52□□□□□ -1.85
LPP-220ENST00000617246 SLC30A1Q9Y6M5 507 aa3.52□□□□□ -1.85
LPP-220ENST00000617246 ANK1P16157 1881 aa3.52□□□□□ -1.85
LPP-220ENST00000617246 LRRC53A6NM62 1247 aa3.52□□□□□ -1.85
LPP-220ENST00000617246 ALPIP09923 528 aa3.52□□□□□ -1.85
LPP-220ENST00000617246 SP100P23497 879 aaPredicted RBP3.52□□□□□ -1.85
LPP-220ENST00000617246 GRIN1Q05586 938 aa3.52□□□□□ -1.85
LPP-220ENST00000617246 SETMARQ53H47 684 aaPredicted RBP3.52□□□□□ -1.85
LPP-220ENST00000617246 OGFOD2Q6N063 350 aa3.52□□□□□ -1.85
LPP-220ENST00000617246 PRICKLE2Q7Z3G6 844 aa3.52□□□□□ -1.85
LPP-220ENST00000617246 KIAA0754O94854 1291 aa3.52□□□□□ -1.85
LPP-220ENST00000617246 RB1P06400 928 aa3.52□□□□□ -1.85
LPP-220ENST00000617246 LPLP06858 475 aa3.52□□□□□ -1.85
LPP-220ENST00000617246 KLK3P07288 261 aaPredicted RBP3.52□□□□□ -1.85
LPP-220ENST00000617246 PLA2G4BP0C869 781 aa3.52□□□□□ -1.85
LPP-220ENST00000617246 PABPC1P11940 636 aaKnown RBP3.52□□□□□ -1.85
LPP-220ENST00000617246 AKAP5P24588 427 aa3.52□□□□□ -1.85
LPP-220ENST00000617246 BOP1Q14137 746 aaKnown RBP3.52□□□□□ -1.85
LPP-220ENST00000617246 DENND2CQ68D51 928 aa3.52□□□□□ -1.85
LPP-220ENST00000617246 PABPC3Q9H361 631 aaKnown RBP3.52□□□□□ -1.85
LPP-220ENST00000617246 HDAC6Q9UBN7 1215 aa3.52□□□□□ -1.85
LPP-220ENST00000617246 MEGF6O75095 1541 aa3.52□□□□□ -1.85
LPP-220ENST00000617246 NFAT5O94916 1531 aa3.52□□□□□ -1.85
LPP-220ENST00000617246 TMEM110-MUSTN1A8MSY1 372 aa3.52□□□□□ -1.85
LPP-220ENST00000617246 NPC1O15118 1278 aa3.52□□□□□ -1.85
LPP-220ENST00000617246 POLR3GO15318 223 aaPredicted RBP3.52□□□□□ -1.85
LPP-220ENST00000617246 KRT86O43790 486 aa3.52□□□□□ -1.85
LPP-220ENST00000617246 ANXA1P04083 346 aa3.52□□□□□ -1.85
LPP-220ENST00000617246 SULT2A1Q06520 285 aa3.52□□□□□ -1.85
LPP-220ENST00000617246 MYLK4Q86YV6 388 aaPredicted RBP3.52□□□□□ -1.85
LPP-220ENST00000617246 LRRC37BQ96QE4 947 aa3.52□□□□□ -1.85
LPP-220ENST00000617246 ZWILCHQ9H900 591 aa3.52□□□□□ -1.85
LPP-220ENST00000617246 RNF186Q9NXI6 227 aa3.52□□□□□ -1.85
LPP-220ENST00000617246 IGSF9Q9P2J2 1179 aa3.52□□□□□ -1.85
LPP-220ENST00000617246 WDR35Q9P2L0 1181 aa3.52□□□□□ -1.85
LPP-220ENST00000617246 E2F3O00716 465 aa3.52□□□□□ -1.85
LPP-220ENST00000617246 CXCL14O95715 111 aa3.52□□□□□ -1.85
LPP-220ENST00000617246 NDUFA9Q16795 377 aa3.52□□□□□ -1.85
LPP-220ENST00000617246 FKBP1CQ5VVH2 108 aa3.52□□□□□ -1.85
LPP-220ENST00000617246 GSPT2Q8IYD1 628 aaKnown RBP3.52□□□□□ -1.85
LPP-220ENST00000617246 SNIP1Q8TAD8 396 aaKnown RBP3.52□□□□□ -1.85
LPP-220ENST00000617246 CCDC138Q96M89 665 aa3.52□□□□□ -1.85
LPP-220ENST00000617246 PARVGQ9HBI0 331 aa3.52□□□□□ -1.85
LPP-220ENST00000617246 HNRNPCL2B2RXH8 293 aa3.52□□□□□ -1.85
LPP-220ENST00000617246 ORC4O43929 436 aa3.52□□□□□ -1.85
LPP-220ENST00000617246 HNRNPCL1O60812 293 aaKnown RBP3.52□□□□□ -1.85
LPP-220ENST00000617246 PMLP29590 882 aa3.52□□□□□ -1.85
LPP-220ENST00000617246 ADKP55263 362 aaKnown RBP3.52□□□□□ -1.85
LPP-220ENST00000617246 DNAJB7Q7Z6W7 309 aaPredicted RBP3.52□□□□□ -1.85
LPP-220ENST00000617246 C2orf15Q8WU43 125 aaKnown RBP3.52□□□□□ -1.85
LPP-220ENST00000617246 PAWRQ96IZ0 340 aaKnown RBP3.52□□□□□ -1.85
LPP-220ENST00000617246 LDHAL6BQ9BYZ2 381 aaPredicted RBP3.52□□□□□ -1.85
LPP-220ENST00000617246 FAM124BQ9H5Z6 455 aaPredicted RBP3.52□□□□□ -1.85
LPP-220ENST00000617246 GREM2Q9H772 168 aa3.52□□□□□ -1.85
LPP-220ENST00000617246 SDAD1Q9NVU7 687 aaKnown RBP eCLIP3.52□□□□□ -1.85
LPP-220ENST00000617246 CNOT8Q9UFF9 292 aaKnown RBP3.52□□□□□ -1.85
LPP-220ENST00000617246 RHPN2P1A8MT19 583 aa3.52□□□□□ -1.85
LPP-220ENST00000617246 RPL17P18621 184 aaKnown RBP3.52□□□□□ -1.85
LPP-220ENST00000617246 RGS4P49798 205 aa3.52□□□□□ -1.85
LPP-220ENST00000617246 IMPG1Q17R60 797 aa3.52□□□□□ -1.85
LPP-220ENST00000617246 NFRKBQ6P4R8 1299 aa3.52□□□□□ -1.85
LPP-220ENST00000617246 GUF1Q8N442 669 aaKnown RBP3.52□□□□□ -1.85
LPP-220ENST00000617246 SPATC1LQ9H0A9 340 aa3.52□□□□□ -1.85
LPP-220ENST00000617246 NKX2-4Q9H2Z4 354 aa3.52□□□□□ -1.85
LPP-220ENST00000617246 SLC26A4O43511 780 aa3.52□□□□□ -1.85
LPP-220ENST00000617246 ZNF217O75362 1048 aa3.52□□□□□ -1.85
LPP-220ENST00000617246 GLP2RO95838 553 aa3.52□□□□□ -1.85
LPP-220ENST00000617246 JUPP14923 745 aa3.52□□□□□ -1.85
LPP-220ENST00000617246 PIK3R1P27986 724 aa3.52□□□□□ -1.85
LPP-220ENST00000617246 PPP3CCP48454 512 aa3.52□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms