RNA–Protein interactions for RNA: ENST00000617222.4

PCDHGC3-204, Transcript of protocadherin gamma subfamily C, 3, humanhuman

TSL 3 BASIC

Gene PCDHGC3, Length 731 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-204ENST00000617222 NDST1P52848 882 aa16.67■□□□□ 0.26
PCDHGC3-204ENST00000617222 CREMQ03060 361 aa16.67■□□□□ 0.26
PCDHGC3-204ENST00000617222 INCA1Q0VD86 236 aa16.67■□□□□ 0.26
PCDHGC3-204ENST00000617222 ORC1Q13415 861 aa16.67■□□□□ 0.26
PCDHGC3-204ENST00000617222 RAPGEF1Q13905 1077 aa16.67■□□□□ 0.26
PCDHGC3-204ENST00000617222 ADGRE1Q14246 886 aa16.67■□□□□ 0.26
PCDHGC3-204ENST00000617222 ZNF394Q53GI3 561 aa16.67■□□□□ 0.26
PCDHGC3-204ENST00000617222 UNC93AQ86WB7 457 aa16.67■□□□□ 0.26
PCDHGC3-204ENST00000617222 TTC39CQ8N584 583 aa16.67■□□□□ 0.26
PCDHGC3-204ENST00000617222 WHAMMQ8TF30 809 aa16.67■□□□□ 0.26
PCDHGC3-204ENST00000617222 TWNKQ96RR1 684 aa16.67■□□□□ 0.26
PCDHGC3-204ENST00000617222 ACBD6Q9BR61 282 aa16.67■□□□□ 0.26
PCDHGC3-204ENST00000617222 OXCT2Q9BYC2 517 aaPredicted RBP16.67■□□□□ 0.26
PCDHGC3-204ENST00000617222 ELOVL4Q9GZR5 314 aa16.67■□□□□ 0.26
PCDHGC3-204ENST00000617222 NLRC4Q9NPP4 1024 aa16.67■□□□□ 0.26
PCDHGC3-204ENST00000617222 HMGXB4Q9UGU5 601 aa16.67■□□□□ 0.26
PCDHGC3-204ENST00000617222 PER2O15055 1255 aa16.66■□□□□ 0.26
PCDHGC3-204ENST00000617222 ATP2C2O75185 946 aa16.66■□□□□ 0.26
PCDHGC3-204ENST00000617222 KRT5P13647 590 aa16.66■□□□□ 0.26
PCDHGC3-204ENST00000617222 KLRC2P26717 231 aa16.66■□□□□ 0.26
PCDHGC3-204ENST00000617222 ZNF75DP51815 510 aa16.66■□□□□ 0.26
PCDHGC3-204ENST00000617222 CDR1P51861 262 aa16.66■□□□□ 0.26
PCDHGC3-204ENST00000617222 PSMC1P62191 440 aaKnown RBP16.66■□□□□ 0.26
PCDHGC3-204ENST00000617222 TSPY1Q01534 308 aa16.66■□□□□ 0.26
PCDHGC3-204ENST00000617222 DRAP1Q14919 205 aaPredicted RBP16.66■□□□□ 0.26
PCDHGC3-204ENST00000617222 SLC8B1Q6J4K2 584 aa16.66■□□□□ 0.26
PCDHGC3-204ENST00000617222 TMEM270Q6UE05 265 aa16.66■□□□□ 0.26
PCDHGC3-204ENST00000617222 ADGRD2Q7Z7M1 963 aa16.66■□□□□ 0.26
PCDHGC3-204ENST00000617222 ACOT1Q86TX2 421 aa16.66■□□□□ 0.26
PCDHGC3-204ENST00000617222 RBM23Q86U06 439 aaKnown RBP16.66■□□□□ 0.26
PCDHGC3-204ENST00000617222 LRRTM3Q86VH5 581 aa16.66■□□□□ 0.26
PCDHGC3-204ENST00000617222 DEFB123Q8N688 67 aa16.66■□□□□ 0.26
PCDHGC3-204ENST00000617222 JAKMIP2Q96AA8 810 aa16.66■□□□□ 0.26
PCDHGC3-204ENST00000617222 GAS2L1Q99501 681 aaPredicted RBP16.66■□□□□ 0.26
PCDHGC3-204ENST00000617222 LPIN3Q9BQK8 851 aa16.66■□□□□ 0.26
PCDHGC3-204ENST00000617222 SYT15Q9BQS2 421 aa16.66■□□□□ 0.26
PCDHGC3-204ENST00000617222 NT5C1AQ9BXI3 368 aa16.66■□□□□ 0.26
PCDHGC3-204ENST00000617222 NAA15Q9BXJ9 866 aaKnown RBP16.66■□□□□ 0.26
PCDHGC3-204ENST00000617222 ZCWPW1Q9H0M4 648 aa16.66■□□□□ 0.26
PCDHGC3-204ENST00000617222 DPEP3Q9H4B8 488 aa16.66■□□□□ 0.26
PCDHGC3-204ENST00000617222 FAM124BQ9H5Z6 455 aaPredicted RBP16.66■□□□□ 0.26
PCDHGC3-204ENST00000617222 TLE6Q9H808 572 aa16.66■□□□□ 0.26
PCDHGC3-204ENST00000617222 PLXNA4Q9HCM2 1894 aa16.66■□□□□ 0.26
PCDHGC3-204ENST00000617222 LMCD1Q9NZU5 365 aa16.66■□□□□ 0.26
PCDHGC3-204ENST00000617222 CDH9Q9ULB4 789 aa16.66■□□□□ 0.26
PCDHGC3-204ENST00000617222 MYBPHLA2RUH7 354 aa16.65■□□□□ 0.26
PCDHGC3-204ENST00000617222 FOXN3O00409 490 aaPredicted RBP16.65■□□□□ 0.26
PCDHGC3-204ENST00000617222 CLASP2O75122 1294 aaKnown RBP16.65■□□□□ 0.26
PCDHGC3-204ENST00000617222 CPB1P15086 417 aa16.65■□□□□ 0.26
PCDHGC3-204ENST00000617222 PTPN1P18031 435 aaKnown RBP16.65■□□□□ 0.26
PCDHGC3-204ENST00000617222 TRIM21P19474 475 aaKnown RBP16.65■□□□□ 0.26
PCDHGC3-204ENST00000617222 RFX1P22670 979 aa16.65■□□□□ 0.26
PCDHGC3-204ENST00000617222 USP8P40818 1118 aa16.65■□□□□ 0.26
PCDHGC3-204ENST00000617222 NDUFV1P49821 464 aa16.65■□□□□ 0.26
PCDHGC3-204ENST00000617222 RAB33AQ14088 237 aa16.65■□□□□ 0.26
PCDHGC3-204ENST00000617222 INTS6LQ5JSJ4 861 aaKnown RBP16.65■□□□□ 0.26
PCDHGC3-204ENST00000617222 PALB2Q86YC2 1186 aa16.65■□□□□ 0.26
PCDHGC3-204ENST00000617222 VSTM4Q8IW00 320 aa16.65■□□□□ 0.26
PCDHGC3-204ENST00000617222 DCP1BQ8IZD4 617 aaKnown RBP16.65■□□□□ 0.26
PCDHGC3-204ENST00000617222 CRYBG2Q8N1P7 616 aa16.65■□□□□ 0.26
PCDHGC3-204ENST00000617222 CDX2Q99626 313 aaPredicted RBP16.65■□□□□ 0.26
PCDHGC3-204ENST00000617222 STK33Q9BYT3 514 aa16.65■□□□□ 0.26
PCDHGC3-204ENST00000617222 NSUN3Q9H649 340 aaKnown RBP16.65■□□□□ 0.26
PCDHGC3-204ENST00000617222 CRTAC1Q9NQ79 661 aa16.65■□□□□ 0.26
PCDHGC3-204ENST00000617222 GTF3C4Q9UKN8 822 aa16.65■□□□□ 0.26
PCDHGC3-204ENST00000617222 MTCH2Q9Y6C9 303 aa16.65■□□□□ 0.26
PCDHGC3-204ENST00000617222 MYO7AQ13402 2215 aa16.65■□□□□ 0.26
PCDHGC3-204ENST00000617222 LAMA2P24043 3122 aaKnown RBP16.65■□□□□ 0.26
PCDHGC3-204ENST00000617222 FSD2A1L4K1 749 aa16.64■□□□□ 0.25
PCDHGC3-204ENST00000617222 RNF225M0QZC1 329 aaPredicted RBP16.64■□□□□ 0.25
PCDHGC3-204ENST00000617222 ADH1AP07327 375 aa16.64■□□□□ 0.25
PCDHGC3-204ENST00000617222 PNMA6AP0CW24 399 aaPredicted RBP16.64■□□□□ 0.25
PCDHGC3-204ENST00000617222 POU3F3P20264 500 aaPredicted RBP16.64■□□□□ 0.25
PCDHGC3-204ENST00000617222 RAD23BP54727 409 aa16.64■□□□□ 0.25
PCDHGC3-204ENST00000617222 ROR1Q01973 937 aa16.64■□□□□ 0.25
PCDHGC3-204ENST00000617222 GPR17Q13304 367 aa16.64■□□□□ 0.25
PCDHGC3-204ENST00000617222 CCDC142Q17RM4 750 aa16.64■□□□□ 0.25
PCDHGC3-204ENST00000617222 SLC39A12Q504Y0 691 aa16.64■□□□□ 0.25
PCDHGC3-204ENST00000617222 TCEAL5Q5H9L2 206 aa16.64■□□□□ 0.25
PCDHGC3-204ENST00000617222 FAM171BQ6P995 826 aa16.64■□□□□ 0.25
PCDHGC3-204ENST00000617222 CACNA2D4Q7Z3S7 1137 aa16.64■□□□□ 0.25
PCDHGC3-204ENST00000617222 SLC4A11Q8NBS3 891 aa16.64■□□□□ 0.25
PCDHGC3-204ENST00000617222 RBBP8NLQ8NC74 664 aaPredicted RBP16.64■□□□□ 0.25
PCDHGC3-204ENST00000617222 MYLIPQ8WY64 445 aa16.64■□□□□ 0.25
PCDHGC3-204ENST00000617222 SHC3Q92529 594 aa16.64■□□□□ 0.25
PCDHGC3-204ENST00000617222 TMEM176AQ96HP8 235 aa16.64■□□□□ 0.25
PCDHGC3-204ENST00000617222 TNIP3Q96KP6 325 aa16.64■□□□□ 0.25
PCDHGC3-204ENST00000617222 HEXIM2Q96MH2 286 aaKnown RBP16.64■□□□□ 0.25
PCDHGC3-204ENST00000617222 NUP58Q9BVL2 599 aa16.64■□□□□ 0.25
PCDHGC3-204ENST00000617222 GRPEL1Q9HAV7 217 aa16.64■□□□□ 0.25
PCDHGC3-204ENST00000617222 TMLHEQ9NVH6 421 aa16.64■□□□□ 0.25
PCDHGC3-204ENST00000617222 CEP72Q9P209 647 aa16.64■□□□□ 0.25
PCDHGC3-204ENST00000617222 DAAM1Q9Y4D1 1078 aa16.64■□□□□ 0.25
PCDHGC3-204ENST00000617222 VWA8A3KMH1 1905 aa16.64■□□□□ 0.25
PCDHGC3-204ENST00000617222 WDR27A2RRH5 827 aa16.63■□□□□ 0.25
PCDHGC3-204ENST00000617222 NRIP1P48552 1158 aa16.63■□□□□ 0.25
PCDHGC3-204ENST00000617222 MDH1BQ5I0G3 518 aa16.63■□□□□ 0.25
PCDHGC3-204ENST00000617222 RNF19BQ6ZMZ0 732 aa16.63■□□□□ 0.25
PCDHGC3-204ENST00000617222 B3GALNT2Q8NCR0 500 aa16.63■□□□□ 0.25
PCDHGC3-204ENST00000617222 ZNF461Q8TAF7 563 aa16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms